New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3082219 | 35 (0.810) | 5 (0.120) | 5/238 | NT | 12.2% | coding (339/1719 nt) | PP_2691 | hypothetical protein |
? | NC_002947 | = 3082250 | 39 (0.960) | coding (308/1719 nt) | PP_2691 | hypothetical protein |
CTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATC > NC_002947/3082071‑3082368 | cTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCgg < 1:769575/150‑1 (MQ=255) cTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGa > 1:1069764‑M1/1‑149 (MQ=255) ttCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGc > 2:1006629/1‑150 (MQ=255) cgccgcCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCAc < 1:1116804/150‑1 (MQ=255) gccgccAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACg < 1:615626/150‑1 (MQ=255) gccgccAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACg > 2:688963/1‑150 (MQ=255) gccAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAg < 1:224686/150‑1 (MQ=255) cAGAAACCAGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCt > 1:746004/1‑150 (MQ=255) aGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACCACACCCGGACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTg < 1:909931/150‑1 (MQ=255) tCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGaccagtgggac < 2:428961‑M1/134‑12 (MQ=255) tCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGaccagtgggac > 1:428961‑M1/1‑123 (MQ=255) tCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCAc > 1:124067/1‑150 (MQ=255) aTTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTc < 1:951323‑M2/150‑2 (MQ=255) tGCGCAAGCTACGGTTGGCCCGCGACAACACCAGTACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTcgg > 1:148681‑M2/1‑147 (MQ=255) cAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGaccagtgggacgtcagcttcgtgctggtggccggcgat < 2:1069764‑M1/150‑39 (MQ=255) ggCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCt < 1:829049/150‑1 (MQ=255) cAGNACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCcggcgg > 2:696501/1‑150 (MQ=255) cAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCcggcgg > 1:1034622/1‑150 (MQ=255) cAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGGCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCcggcgg > 2:391486/1‑150 (MQ=255) aGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCggcggc > 2:1070711/1‑150 (MQ=255) aGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGagaaga < 2:804334/150‑1 (MQ=255) gccggcTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTgc > 1:624492/1‑116 (MQ=255) gccggcTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTgc < 2:624492/116‑1 (MQ=255) ccggcTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACg < 2:1120066/150‑1 (MQ=255) ttCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGACGCACGCGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTg < 1:688963/150‑1 (MQ=255) ccTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGt > 2:881889/1‑150 (MQ=255) cTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGaccagtgggacgtcagcttcgtgctggtggccgg < 1:352781‑M1/89‑35 (MQ=255) cTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGaccagtgggacgtcagcttcgtgctggtggccgg > 2:352781‑M1/1‑55 (MQ=255) cTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTa > 1:391523/1‑150 (MQ=255) gCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGAcc < 2:460611/92‑1 (MQ=255) gCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGAcc > 1:460611/1‑92 (MQ=255) ttgcgttgcAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGc > 1:1123711/1‑150 (MQ=255) ttgcgttgcAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGc < 2:124067/150‑1 (MQ=255) cAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGAt < 2:1034622/150‑1 (MQ=255) ggTTGGCCAGTTGTGCCGACTAGAAATCGCCGGTTACCAGCACGAAGCTGACGTGCCACTGGTCGGCGATGAGCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGTCGAGGAGATCAAGAAGTGGTAGTGAGCGTTTGGCGTTTTGATGc > 2:512291/1‑150 (MQ=255) tCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCgg < 2:746004/150‑1 (MQ=255) ccAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGa < 1:400189/150‑1 (MQ=255) aGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGCGGCCGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATc < 1:608432/150‑1 (MQ=255) gTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCg < 1:881889/150‑1 (MQ=255) tgtgCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCa < 1:493348/150‑1 (MQ=255) tgtgCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCa < 2:650524/150‑1 (MQ=255) tgtgCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCa < 1:1006629/150‑1 (MQ=255) aCATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCt > 1:576415/1‑150 (MQ=255) cATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCtt < 2:828614/150‑1 (MQ=255) aTCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTcggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcaggaagccggccgcttcgatgcacgcgtgctggtgttgtcgcgggccaaccgtagcttg < 2:1069764‑M2/150‑113 (MQ=255) tCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGa < 2:391523/150‑1 (MQ=255) ccGaccagtgggacgtcagcttcgtgctggtggccggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcaggaagccggccgcttcgatgcacgcgtactggtgttgtcgcgggccaaccgtagcttgcgca > 1:148681‑M1/1‑3 (MQ=255) ccGGCCACCAGCACGAAGCTGACGTCCCACTGGTcggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcag > 2:352781‑M2/1‑34 (MQ=255) ccGGCCACCAGCACGAAGCTGACGTCCCACTGGTcggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcag < 1:352781‑M2/89‑56 (MQ=255) ccGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCa > 2:837206/1‑150 (MQ=255) gaccagtgggacgtcagcttcgtgctggtggccggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcaggaagccggccgcttcgatgcacgcgtgctggtgttgtcgcgggccaaccgtagcttgcgcaat < 1:951323‑M1/150‑150 (MQ=255) | CTTCTGCCAGCGCCGCCAGAAACCGGTCGAAATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATC > NC_002947/3082071‑3082368 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |