New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3082219 | 35 (0.810) | 5 (0.120) | 5/238 | NT | 12.2% | coding (339/1719 nt) | PP_2691 | hypothetical protein |
? | NC_002947 | = 3082250 | 39 (0.960) | coding (308/1719 nt) | PP_2691 | hypothetical protein |
ATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGAAACAGCTGCGCCGGATTTGCCAG > NC_002947/3082102‑3082399 | aTTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTc < 1:951323‑M2/150‑2 (MQ=255) tGCGCAAGCTACGGTTGGCCCGCGACAACACCAGTACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTcgg > 1:148681‑M2/1‑147 (MQ=255) ggCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCt < 1:829049/150‑1 (MQ=255) cAGNACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCcggcgg > 2:696501/1‑150 (MQ=255) cAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCcggcgg > 1:1034622/1‑150 (MQ=255) cAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGGCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCcggcgg > 2:391486/1‑150 (MQ=255) aGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCggcggc > 2:1070711/1‑150 (MQ=255) aGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGagaaga < 2:804334/150‑1 (MQ=255) gccggcTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTgc < 2:624492/116‑1 (MQ=255) gccggcTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTgc > 1:624492/1‑116 (MQ=255) ccggcTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACg < 2:1120066/150‑1 (MQ=255) ttCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGACGCACGCGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTg < 1:688963/150‑1 (MQ=255) ccTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGt > 2:881889/1‑150 (MQ=255) cTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTa > 1:391523/1‑150 (MQ=255) gCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGAcc > 1:460611/1‑92 (MQ=255) gCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGAcc < 2:460611/92‑1 (MQ=255) ttgcgttgcAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGc < 2:124067/150‑1 (MQ=255) ttgcgttgcAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGc > 1:1123711/1‑150 (MQ=255) cAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGAt < 2:1034622/150‑1 (MQ=255) ggTTGGCCAGTTGTGCCGACTAGAAATCGCCGGTTACCAGCACGAAGCTGACGTGCCACTGGTCGGCGATGAGCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGTCGAGGAGATCAAGAAGTGGTAGTGAGCGTTTGGCGTTTTGATGc > 2:512291/1‑150 (MQ=255) tCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCgg < 2:746004/150‑1 (MQ=255) ccAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGa < 1:400189/150‑1 (MQ=255) aGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGCGGCCGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATc < 1:608432/150‑1 (MQ=255) gTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCg < 1:881889/150‑1 (MQ=255) tgtgCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCa < 2:650524/150‑1 (MQ=255) tgtgCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCa < 1:1006629/150‑1 (MQ=255) tgtgCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCa < 1:493348/150‑1 (MQ=255) aCATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCt > 1:576415/1‑150 (MQ=255) cATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCtt < 2:828614/150‑1 (MQ=255) aTCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTcggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcaggaagccggccgcttcgatgcacgcgtgctggtgttgtcgcgggccaaccgtagcttg < 2:1069764‑M2/150‑113 (MQ=255) tCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGa < 2:391523/150‑1 (MQ=255) ccGGCCACCAGCACGAAGCTGACGTCCCACTGGTcggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcag > 2:352781‑M2/1‑34 (MQ=255) ccGGCCACCAGCACGAAGCTGACGTCCCACTGGTcggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcag < 1:352781‑M2/89‑56 (MQ=255) ccGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCa > 2:837206/1‑150 (MQ=255) accaGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAgg > 2:43811/1‑150 (MQ=255) gCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGGGATTGGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGa > 1:618555/1‑150 (MQ=255) aCGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGaa > 2:237282/1‑128 (MQ=255) aCGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGaa < 1:237282/128‑1 (MQ=255) aCGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGaaa < 1:175037/150‑1 (MQ=255) gAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCCTCGAGGTCGAAACa > 1:775694/1‑150 (MQ=255) gAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGa < 1:635578/140‑1 (MQ=255) gAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGa > 2:635578/1‑140 (MQ=255) tGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGAAACAGCTgc > 1:894011/1‑150 (MQ=255) tGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGAAACAGCTgc < 1:696501/150‑1 (MQ=255) gACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGAAACAGCTgcg > 1:1089715/1‑150 (MQ=255) gTCCCACTGGTcggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcaggaagccggccgcttcgatgcacgcgtgctggtgttgtcgcgggccaaccgtagcttgcgcaatttcga < 2:428961‑M2/134‑124 (MQ=255) gTCCCACTGGTcggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcaggaagccggccgcttcgatgcacgcgtgctggtgttgtcgcgggccaaccgtagcttgcgcaatttcga > 1:428961‑M2/1‑11 (MQ=255) ccACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGAAACAGCTGCGCCGGAt < 1:1070711/150‑1 (MQ=255) gTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGAAACAGCTGCGCCGGATTTGCCa > 2:295621/1‑150 (MQ=255) gTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGAAACAGCTGCGCCGGATTTGCCa < 2:894011/150‑1 (MQ=255) tcggcgatgtcgactcggcacaactggccgacctgcaacgcaacgtgccgctgcaggaagccggccgcttcgatgcacgcgtgctggtgttgtcgcgggccaaccgtagcttgcgcaatttcgaccggtttctggcggcgctggcagaag > 1:1069764‑M2/1‑1 (MQ=255) | ATTGCGCAAGCTACGGTTGGCCCGCGACAACACCAGCACGCGTGCATCGAAGCGGCCGGCTTCCTGCAGCGGCACGTTGCGTTGCAGGTCGGCCAGTTGTGCCGAGTCGACATCGCCGGCCACCAGCACGAAGCTGACGTCCCACTGGTCGGCGATGACCCGATCGCTGCGCTTTTCCGGCGGCAGGTAGGCCGAGAAGATCACGCAGTGGTAATGGCCGTTTGGCGTTTCGATGCGGTAGATCGCAGTGCCGAAGCCTTGACCATCGAGGTCGAAACAGCTGCGCCGGATTTGCCAG > NC_002947/3082102‑3082399 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |