New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3835561 | 19 (0.440) | 3 (0.070) | 3/240 | NT | 12.3% | coding (6/879 nt) | PP_3387 | hypothetical protein |
? | NC_002947 | = 3835595 | 25 (0.610) | coding (40/879 nt) | PP_3387 | hypothetical protein |
AAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3835407‑3835561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcccGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTGCTCCTTCCATGCGAATGATGGTGTGGCCGTCGGCGATCGCCTTGAGCAGGCAGCTGAGGCAAATGGGTTCGCCAGGCGCTGGTACGCCAGACGTTGA < NC_002947/3835595‑3835452 AAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGGCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGA > 2:1066823/1‑150 AAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGAT > 1:638943/1‑150 ACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAG < 1:728682/150‑1 ACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAG > 2:281382/1‑150 CTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTG < 1:281382/150‑1 ATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTGCTCCTTCCATGCGAATGATGGTGTGGCCGTCGGCGATCGCCTTGAGCAGGCAGCTGAGGCAAATGGGTTCGCCAGGCGCTGGTACGCCAGACGTTGA < 1:673342/150‑1 AAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3835407‑3835561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcccGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTGCTCCTTCCATGCGAATGATGGTGTGGCCGTCGGCGATCGCCTTGAGCAGGCAGCTGAGGCAAATGGGTTCGCCAGGCGCTGGTACGCCAGACGTTGA < NC_002947/3835595‑3835452 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |