New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 383556119 (0.440)3 (0.070) 3/240 NT 12.3% coding (6/879 nt) PP_3387 hypothetical protein
?NC_002947 = 3835595 25 (0.610)coding (40/879 nt) PP_3387 hypothetical protein

AAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3835407‑3835561
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcccGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTGCTCCTTCCATGCGAATGATGGTGTGGCCGTCGGCGATCGCCTTGAGCAGGCAGCTGAGGCAAATGGGTTCGCCAGGCGCTGGTACGCCAGACGTTGA  <  NC_002947/3835595‑3835452
                                                                                                                                                                                                                                                                                                           
AAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGGCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGA                                                                                                                                                       >  2:1066823/1‑150
 AAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGAT                                                                                                                                                      >  1:638943/1‑150
                                                ACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAG                                                                                                       <  1:728682/150‑1
                                                ACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAG                                                                                                       >  2:281382/1‑150
                                                    CTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTG                                                                                                   <  1:281382/150‑1
                                                                                                                                                     ATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTGCTCCTTCCATGCGAATGATGGTGTGGCCGTCGGCGATCGCCTTGAGCAGGCAGCTGAGGCAAATGGGTTCGCCAGGCGCTGGTACGCCAGACGTTGA  <  1:673342/150‑1
                                                                                                                                                                                                                                                                                                           
AAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3835407‑3835561
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcccGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTGCTCCTTCCATGCGAATGATGGTGTGGCCGTCGGCGATCGCCTTGAGCAGGCAGCTGAGGCAAATGGGTTCGCCAGGCGCTGGTACGCCAGACGTTGA  <  NC_002947/3835595‑3835452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.