New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4830927 = | 35 (0.810) | 4 (0.090) | 4/248 | NT | 9.5% | coding (308/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | 4830978 = | 42 (0.990) | coding (257/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
CCTGTATGCGGGCGTGATCGCGGTGCCGGCCTACCCGCCGGAGTCCGCG‑‑‑‑CGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4830983‑4830927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaTACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGCTGAGCACGGCCTGCTC > NC_002947/4830978‑4831126 CCTGTATGCGGGCGTGATCGCGGTGCCGGCCTACCCGCCGGAGTCCGCG‑‑‑‑CGCCAGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCG > 1:234399/1‑150 TATGCGGGCGTGATCGCGGTGCCGGCCTACCCGCCGGAGTCCGCG‑‑‑‑CGCCAGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCAC < 1:1037139/109‑1 TATGCGGGCGTGATCGCGGTGCCGGCCTACCCGCCGGAGTCCGCG‑‑‑‑CGCCAGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCAC > 2:1037139/1‑109 GCGTGATCGAGGTGCTGGCCTACCCGCCGGAGTCCGCGATCACGCCCGCATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGA > 2:596195/1‑150 ATACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGCTGAGCACGGCCTGCTC < 1:322534/150‑1 CCTGTATGCGGGCGTGATCGCGGTGCCGGCCTACCCGCCGGAGTCCGCG‑‑‑‑CGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4830983‑4830927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaTACAGGCAGCCGAAGAACGCCGCCACGTAATCTGGCCCGCTGGGGAACAACAGCACGGCACGGTCACCGAAGCTGGCGCGCCCCTGCAAGGCGGCGGCGATGGTGCGTGCACGCTGGTCGAGGTCCCGGTAGCTGAGCACGGCCTGCTC > NC_002947/4830978‑4831126 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |