New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4344193	41 (0.950)	4 (0.100)	4/242	NT	10.4%	coding (1029/1149 nt)	PP_3817	polyamine ABC transporter ATP‑binding protein
	?	NC_002947	= 4344219	30 (0.730)					coding (1055/1149 nt)	PP_3817	polyamine ABC transporter ATP‑binding protein

CCGAACAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCC  >  NC_002947/4344051‑4344339                                                                                                                                               |                                                                                                                                                   ccGAACAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTcggcggcgg                                                                                                                                             <  2:913212/150‑1 (MQ=255) ccGAACAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTcggcggcgg                                                                                                                                             <  2:623584/150‑1 (MQ=255)     aCAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTAGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCAt                                                                                                                                         >  2:599243/1‑150 (MQ=255)     aCAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGAACAGTTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCAt                                                                                                                                         <  1:618230/150‑1 (MQ=255)        ggCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGcc                                                                                                                                      >  1:675881/1‑150 (MQ=255)         gCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCg                                                                                                                                     >  1:368167/1‑150 (MQ=255)          ccATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGa                                                                                                                                    <  2:264834/150‑1 (MQ=255)                        cTGCCGGCGGGTTGGACCGAGGTCACTGCCAACGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgac                                                                                                                      >  1:72264‑M2/1‑146 (MQ=255)                         tGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgaca                                                                                                                     <  1:200788‑M2/150‑6 (MQ=255)                             ggcggGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGt                                                                                                                 <  1:1021251/150‑1 (MQ=255)                                   ttGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGcccggctgcatcggcatgcccgccgccgacagt                                                                                                                   >  2:778086‑M1/1‑109 (MQ=255)                                   ttGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGcccggctgcatcggcatgcccgccgccgacagt                                                                                                                   <  1:778086‑M1/142‑34 (MQ=255)                                   ttGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGt                                                                                                           <  2:200788/150‑1 (MQ=255)                                     ggAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGc                                                                                                         <  2:198479/150‑1 (MQ=255)                                       aaCGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGcccggctgcatcggcatgcccgccgccgaca                                                                                                                     >  2:691848‑M1/1‑105 (MQ=255)                                       aaCGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGcccggctgcatcggcatgcccgccgccgaca                                                                                                                     <  1:691848‑M1/136‑32 (MQ=255)                                       aaCGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGt                                                                                                       >  1:650526/1‑150 (MQ=255)                                          gAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTgg                                                                                                    >  1:1000336/1‑150 (MQ=255)                                           aGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTggg                                                                                                   <  2:818458/150‑1 (MQ=255)                                             gTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCa                                                                                                 >  2:312446/1‑150 (MQ=255)                                                aCTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTg                                                                                              >  2:377682/1‑150 (MQ=255)                                                aCTGCAAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCGGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTg                                                                                              >  2:1066473/1‑150 (MQ=255)                                                  tGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGc                                                                                            >  2:723554/1‑150 (MQ=255)                                                   gCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGAGCAGTTGCa                                                                                           >  2:357329/1‑150 (MQ=255)                                                    ccAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAg                                                                                          >  2:972065/1‑150 (MQ=255)                                                    ccAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAg                                                                                          >  2:1071438/1‑150 (MQ=255)                                                     cAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGa                                                                                         >  1:162106/1‑150 (MQ=255)                                                            ggCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGc                                                                                  <  1:723554/150‑1 (MQ=255)                                                                   tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTTACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCg                                                                                                                            <  1:982261/101‑1 (MQ=255)                                                                   tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCg                                                                                                                            >  2:982261/1‑101 (MQ=255)                                                                   tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTtata                                                                           <  2:555617/150‑1 (MQ=255)                                                                   tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTtata                                                                           <  2:913271/150‑1 (MQ=255)                                                                    gCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATAc                                                                          <  2:74771/150‑1 (MQ=255)                                                                    gCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATAc                                                                          <  1:377682/150‑1 (MQ=255)                                                                      tGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATCCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCg                                                                        >  1:713588/1‑150 (MQ=255)                                                                       gTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATANCGa                                                                       <  2:697109/150‑1 (MQ=255)                                                                                tGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGc                                                                                                                              >  1:316474/1‑86 (MQ=255)                                                                                tGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGc                                                                                                                              <  2:316474/86‑1 (MQ=255)                                                                                   aaGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGagag                                                           <  2:675881/150‑1 (MQ=255)                                                                                           ccTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGa                                                   <  1:599243/150‑1 (MQ=255)                                                                                                  tgtgGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTc                                            <  2:368167/150‑1 (MQ=255)                                                                                                    tggtgACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCgg                                          >  2:404277/1‑150 (MQ=255)                                                                                                         aCTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCggg                                     <  1:1066473/150‑1 (MQ=255)                                                                                                                  ggTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTaa                            <  1:338239/150‑1 (MQ=255)                                                                                                                  ggTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTaa                            <  1:287715/150‑1 (MQ=255)                                                                                                                   gTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAAc                           <  2:162106/150‑1 (MQ=255)                                                                                                                             gACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTAc                 <  2:650526/150‑1 (MQ=255)                                                                                                                                 gTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTG             >  2:462752‑M1/1‑150 (MQ=255)                                                                                                                                      ggCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCG        >  2:326810‑M1/1‑150 (MQ=255)                                                                                                                                         aCTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgttccaa             <  1:778086‑M2/142‑110 (MQ=255)                                                                                                                                         aCTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgttccaa             >  2:778086‑M2/1‑33 (MQ=255)                                                                                                                                           tGTCGcccggctgcatcggcatgcccgccgccgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgttccaacccgccggca   <  1:200788‑M1/150‑146 (MQ=255)                                                                                                                                           tGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgtt                 >  2:691848‑M2/1‑31 (MQ=255)                                                                                                                                           tGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgtt                 <  1:691848‑M2/136‑106 (MQ=255)                                                                                                                                           tGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGGGCGGCCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGC   >  1:11916‑M1/1‑150 (MQ=255)                                                                                                                                           ggtCGGCGGCGGGCATGTCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCAGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGC   <  2:422165‑M1/149‑1 (MQ=255)                                                                                                                                            gTCGcccggctgcatcggcatgcccgccgccgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaacgttggcagtgacctcggtccaacccgccggcag  >  1:72264‑M1/1‑4 (MQ=255)                                                                                                                                               |                                                                                                                                                   CCGAACAGGCCATGCGTGAACCGCTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCC  >  NC_002947/4344051‑4344339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.