New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4344193	41 (0.950)	4 (0.100)	4/242	NT	10.4%	coding (1029/1149 nt)	PP_3817	polyamine ABC transporter ATP‑binding protein
	?	NC_002947	= 4344219	30 (0.730)					coding (1055/1149 nt)	PP_3817	polyamine ABC transporter ATP‑binding protein

CTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCG  >  NC_002947/4344074‑4344356                                                                                                                                                  |                                                                                                                                          cTGCCGGCGGGTTGGACCGAGGTCACTGCCAACGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgac                                                                                                                                       >  1:72264‑M2/1‑146 (MQ=255)  tGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgaca                                                                                                                                      <  1:200788‑M2/150‑6 (MQ=255)      ggcggGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGt                                                                                                                                  <  1:1021251/150‑1 (MQ=255)            ttGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGt                                                                                                                            <  2:200788/150‑1 (MQ=255)              ggAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGc                                                                                                                          <  2:198479/150‑1 (MQ=255)                aaCGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGt                                                                                                                        >  1:650526/1‑150 (MQ=255)                   gAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTgg                                                                                                                     >  1:1000336/1‑150 (MQ=255)                    aGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTggg                                                                                                                    <  2:818458/150‑1 (MQ=255)                      gTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCa                                                                                                                  >  2:312446/1‑150 (MQ=255)                         aCTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTg                                                                                                               >  2:377682/1‑150 (MQ=255)                         aCTGCAAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCGGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTg                                                                                                               >  2:1066473/1‑150 (MQ=255)                           tGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGc                                                                                                             >  2:723554/1‑150 (MQ=255)                            gCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGAGCAGTTGCa                                                                                                            >  2:357329/1‑150 (MQ=255)                             ccAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAg                                                                                                           >  2:972065/1‑150 (MQ=255)                             ccAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAg                                                                                                           >  2:1071438/1‑150 (MQ=255)                              cAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGa                                                                                                          >  1:162106/1‑150 (MQ=255)                                     ggCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGc                                                                                                   <  1:723554/150‑1 (MQ=255)                                            tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTtata                                                                                            <  2:913271/150‑1 (MQ=255)                                            tGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTtata                                                                                            <  2:555617/150‑1 (MQ=255)                                             gCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATAc                                                                                           <  1:377682/150‑1 (MQ=255)                                             gCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATAc                                                                                           <  2:74771/150‑1 (MQ=255)                                               tGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATCCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCg                                                                                         >  1:713588/1‑150 (MQ=255)                                                gTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATANCGa                                                                                        <  2:697109/150‑1 (MQ=255)                                                            aaGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGagag                                                                            <  2:675881/150‑1 (MQ=255)                                                                    ccTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGa                                                                    <  1:599243/150‑1 (MQ=255)                                                                           tgtgGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTc                                                             <  2:368167/150‑1 (MQ=255)                                                                             tggtgACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCgg                                                           >  2:404277/1‑150 (MQ=255)                                                                                  aCTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCggg                                                      <  1:1066473/150‑1 (MQ=255)                                                                                           ggTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTaa                                             <  1:287715/150‑1 (MQ=255)                                                                                           ggTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTaa                                             <  1:338239/150‑1 (MQ=255)                                                                                            gTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAAc                                            <  2:162106/150‑1 (MQ=255)                                                                                                      gACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTAc                                  <  2:650526/150‑1 (MQ=255)                                                                                                          gTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTG                              >  2:462752‑M1/1‑150 (MQ=255)                                                                                                               ggCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCG                         >  2:326810‑M1/1‑150 (MQ=255)                                                                                                                  aCTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgttccaa                              <  1:778086‑M2/142‑110 (MQ=255)                                                                                                                  aCTGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgttccaa                              >  2:778086‑M2/1‑33 (MQ=255)                                                                                                                    tGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgtt                                  >  2:691848‑M2/1‑31 (MQ=255)                                                                                                                    tGTCGGCGGCGGGCATGCCGATGCAGCCGGGcgacagtgccttcacggtcagctcggtaccccctgcagtcaccacatggcaggtctggctttcacccaggaacagcacttcgccaaccttggcagtgacctcgtt                                  <  1:691848‑M2/136‑106 (MQ=255)                                                                                                                    tGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGGGCGGCCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGC                    >  1:11916‑M1/1‑150 (MQ=255)                                                                                                                    ggtCGGCGGCGGGCATGTCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCAGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGC                    <  2:422165‑M1/149‑1 (MQ=255)                                                                                                                              gggCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCtagc          >  1:462287‑M1/1‑146 (MQ=255)                                                                                                                              gggCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGAAGCTTGCATTTATACCGAAGGATCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGtgt          >  1:135256‑M1/1‑147 (MQ=255)                                                                                                                                      cGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCAccgcccg  >  2:645031/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                          CTGCCGGCGGGTTGGAACGAGGTCACTGCCAAGGTTGGCGAAGTGCTGTTCCTGGGTGAAAGCCAGACCTGCCATGTGGTGACTGCAGGGGGTACCGAGCTGACCGTGAAGGCACTGTCGGCGGCGGGCATGCCGATGCAGCCGGGCGACAGCGTGAAGGTGCGTTGGGCAGTGGCAGACGCTTGCATTTATACCGAATGGGCCGAGAGCGACCTGAGCAAGTCGGCCGGGGCGCATTAACGCTCTTGTACGTTGCAGCGCCTGCCAGATCGAGCACCGCCCG  >  NC_002947/4344074‑4344356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.