New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 88386534 (0.680)22 (0.580) 14/200 1.9 42.4% intergenic (+100/‑228) PP_0766/PP_0767 hypothetical protein/LuxR family transcriptional regulator
?NC_002947 = 883875 34 (0.900)intergenic (+110/‑218) PP_0766/PP_0767 hypothetical protein/LuxR family transcriptional regulator

GCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCA  >  NC_002947/883716‑884014
                                                                                                                                                     |                                                                                                                                                     
gCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTAC                                                                                                                                                       <  2:764220‑M1/150‑1 (MQ=255)
   aGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgg                                                                                                                                                    >  2:470488‑M1/1‑147 (MQ=255)
         aTTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCcgc                                                                                                                                              <  2:945026/150‑1 (MQ=255)
              cAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtag                                                                                                                                         <  1:95273‑M2/150‑5 (MQ=255)
                  ccGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCTCGGGTGAACCCGCTCCTACcgcggaacctgtaggagc                                                                                                                                     <  1:1022676‑M1/150‑19 (MQ=255)
                  ccGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagc                                                                                                                                     <  1:587090‑M1/150‑19 (MQ=255)
                  ccGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagc                                                                                                                                     <  2:955727‑M1/150‑19 (MQ=255)
                   cGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcg                                                                                                                                    <  2:985023‑M1/150‑20 (MQ=255)
                   cGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcg                                                                                                                                    >  2:930008‑M2/1‑141 (MQ=255)
                    gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg                                                                                                                                   <  1:1181612‑M1/150‑21 (MQ=255)
                    gCAGCGCTGCGTCAGTCGGGTATTCGCTAAGATGAAATCACTGAACGCCGTGTGATCCCCAGAACCCCCCGGCGCGCCGGGGCGTTTCTATTTCCGGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg                                                                                                                                   <  1:542305‑M1/150‑21 (MQ=255)
                     cAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcggg                                                                                                                                  <  1:1156407‑M1/150‑22 (MQ=255)
                          cTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgggttcac                                                                                                                             >  1:882307‑M2/1‑134 (MQ=255)
                           gtattcagtCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCGACAGGTTCCGCGctacgagcgggttcccc                                                                                                                            <  2:1046281‑M2/146‑18 (MQ=255)
                            gCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGCACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgggttcaccc                                                                                                                           >  2:675313‑M2/1‑132 (MQ=255)
                            gCGTCAGTCGGGTACTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgggttcaccc                                                                                                                           >  2:971561‑M2/1‑132 (MQ=255)
                                              cTAAGCTGAAATCACTGAACGCCGTGTGATCACCAGACCGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGTCCGCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGggcaag                                                                                                         <  2:614167/150‑1 (MQ=255)
                                                        aTCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcggg                                                                                                                                  >  1:175523‑M1/1‑94 (MQ=255)
                                                        aTCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcggg                                                                                                                                  <  2:175523‑M1/115‑22 (MQ=255)
                                                         tCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCAGCCGTACCCGCTCCCACATCTTCGGCGGTGGGAGCGGGGTTACCGTCCAACTGGGCGGGCCAGGCGATCAAcct                                                                                              >  2:941884/1‑150 (MQ=255)
                                                          cACTGATCGCCGTGTGCTCCCCAGATCGCCCCGGCTCGCCGGGGTGTTTCTATTTCCTGACCCGACCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAAccgc                                                                                             <  1:19387/150‑3 (MQ=38)
                                                           aCTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGggcaaggcaa                                                                                                     >  1:99648/1‑141 (MQ=255)
                                                           aCTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGggcaaggcaa                                                                                                     <  2:99648/141‑1 (MQ=255)
                                                             tGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg                                                                                                                                   <  2:166054‑M1/109‑21 (MQ=255)
                                                             tGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg                                                                                                                                   >  1:166054‑M1/1‑89 (MQ=255)
                                                                  gCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTTTTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATAc                                                                                     <  1:1046281/150‑1 (MQ=255)
                                                                    cGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCaa                                                                                                 >  2:387090/1‑136 (MQ=255)
                                                                    cGTGTGATCCCCAGAACGCCCCGGCGCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCaa                                                                                                 <  1:387090/136‑1 (MQ=255)
                                                                         gATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCa                                                                              <  2:95273/150‑1 (MQ=255)
                                                                             cccAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgggttcacc                                                                                                                            <  2:1115989‑M1/100‑28 (MQ=255)
                                                                             cccAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgggttcacc                                                                                                                            >  1:1115989‑M1/1‑73 (MQ=255)
                                                                              ccAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaa                                                                                                                      <  1:499492‑M2/105‑24 (MQ=255)
                                                                              ccAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaa                                                                                                                      >  2:499492‑M2/1‑82 (MQ=255)
                                                                              ccAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCATGAATACCTCTCCAAAccc                                                                         >  2:784348/1‑150 (MQ=255)
                                                                                  aaCGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaac                                                                                                                                               >  2:262723‑M1/1‑68 (MQ=255)
                                                                                  aaCGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaac                                                                                                                                               <  1:262723‑M1/76‑9 (MQ=255)
                                                                                   aCGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGcc                                                                    >  1:293297/1‑150 (MQ=255)
                                                                                     gCCCCGGCTCGCCGGGGCGTTTCTATTTCCTTGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtag                                                                                                                                         <  1:1024858‑M1/79‑15 (MQ=255)
                                                                                     gCCCCGGCTCGCCGGGGCGTTTCTATTTCCTTGCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtag                                                                                                                                         >  2:1024858‑M1/1‑65 (MQ=255)
                                                                                     gCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg                                                                                                                                   <  2:738184‑M1/85‑21 (MQ=255)
                                                                                     gCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg                                                                                                                                   >  1:738184‑M1/1‑65 (MQ=255)
                                                                                     gCCCCGGCGAGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgg                                                                                                                                   <  2:430387‑M2/85‑11 (MQ=255)
                                                                                     gCCCCGGCGAGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgg                                                                                                                                   >  1:430387‑M2/1‑75 (MQ=255)
                                                                                        ccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaaga                                                                                                                    <  2:234856‑M2/97‑26 (MQ=255)
                                                                                        ccGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaaga                                                                                                                    >  1:234856‑M2/1‑72 (MQ=255)
                                                                                           gCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGGAGGAGCGGGTGCACCCGCGAAGAGGCCGGGCAAGGCAATCGACCTCCTGAATGCCGCTCCAAAGCCCCGACCCAGcccc                                                            >  2:894626/1‑150 (MQ=38)
                                                                                                       gTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg                                                                                                                                   >  2:442035‑M1/1‑47 (MQ=255)
                                                                                                       gTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgg                                                                                                                                   <  1:442035‑M1/67‑21 (MQ=255)
                                                                                                         ttCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAAcctcct                                                                                           >  2:547338/1‑105 (MQ=255)
                                                                                                         ttCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAAcctcct                                                                                           <  1:547338/105‑1 (MQ=255)
                                                                                                         ttCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCAt                                              <  1:60933/150‑1 (MQ=255)
                                                                                                             aTTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAAcctcct                                                                                           >  2:249846/1‑101 (MQ=255)
                                                                                                             aTTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAAcctcct                                                                                           <  1:249846/101‑1 (MQ=255)
                                                                                                                   tGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCCCCCGCGAAGCGGCAAGTTAAGGCAATCAACCGCATGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCttttt                                    <  1:784348/150‑1 (MQ=255)
                                                                                                                     aCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGt                                                         <  2:879808/127‑1 (MQ=255)
                                                                                                                     aCCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGt                                                         >  1:879808/1‑127 (MQ=255)
                                                                                                                      cccGGCCTCTTCGCGGGTGCACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTc                                 <  2:293297/150‑1 (MQ=255)
                                                                                                                      cccGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTc                                 <  1:894626/150‑1 (MQ=255)
                                                                                                                       ccGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGGAGGAGCGGGGTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCg                                >  1:979116/1‑150 (MQ=255)
                                                                                                                             tctTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccgg                                                                               <  2:234856‑M1/97‑73 (MQ=255)
                                                                                                                             tctTCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccgg                                                                               >  1:234856‑M1/1‑25 (MQ=255)
                                                                                                                               ttCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctgg                                                                     >  2:499492‑M1/1‑23 (MQ=255)
                                                                                                                               ttCGCGGGTGAACCCGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctgg                                                                     <  1:499492‑M1/105‑83 (MQ=255)
                                                                                                                               ttCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGAGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCttt                        >  2:44338/1‑150 (MQ=255)
                                                                                                                                tCGCGGGTGAACCCGCTCCTACACGGTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCtttt                       <  1:941884/150‑1 (MQ=255)
                                                                                                                                    gggTGAACCCGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgagtacccgactgacgc                   >  2:971561‑M1/1‑18 (MQ=255)
                                                                                                                                    gggTGAACCCGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgtgcagtgatttcagcttagcgaatacccgactgacgc                   >  2:675313‑M1/1‑18 (MQ=255)
                                                                                                                                     ggggaacCCGCTCGTAGcgcggaacctgtcggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgaatac                  <  2:1046281‑M1/147‑134 (MQ=255)
                                                                                                                                     ggTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggg                                                                    <  2:1115989‑M2/100‑74 (MQ=255)
                                                                                                                                     ggTGAACCCGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggg                                                                    >  1:1115989‑M2/1‑27 (MQ=255)
                                                                                                                                      gTGAACCCGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgacgcag                 >  1:882307‑M1/1‑16 (MQ=255)
                                                                                                                                           cccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgacgcagcgctg            <  1:1156407‑M2/150‑130 (MQ=255)
                                                                                                                                           cccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgat                                               <  2:175523‑M2/115‑95 (MQ=255)
                                                                                                                                           cccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgat                                               >  1:175523‑M2/1‑21 (MQ=255)
                                                                                                                                           cccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTAtt            >  1:42092/1‑150 (MQ=255)
                                                                                                                                           cccGCTCCGACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTAtt            >  1:623709/1‑150 (MQ=255)
                                                                                                                                            ccGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggctcgccggggc                                                                            >  1:430387‑M1/1‑10 (MQ=255)
                                                                                                                                            ccGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggctcgccggggc                                                                            <  2:430387‑M1/85‑76 (MQ=255)
                                                                                                                                            ccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtccggaaatagaaacgccccggcgcgccggggggttctggggatcacacggcgttcagtgatttcatcttagcgaatacccgactgacgcagcgctgc           <  1:542305‑M2/150‑131 (MQ=255)
                                                                                                                                            ccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgacgcagcgctgc           <  1:1181612‑M2/150‑131 (MQ=255)
                                                                                                                                            ccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttca                                                    >  1:166054‑M2/1‑20 (MQ=255)
                                                                                                                                            ccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttca                                                    <  2:166054‑M2/109‑90 (MQ=255)
                                                                                                                                            ccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggc                                                                            >  1:738184‑M2/1‑20 (MQ=255)
                                                                                                                                            ccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggc                                                                            <  2:738184‑M2/85‑66 (MQ=255)
                                                                                                                                            ccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaac                                                                                              <  1:442035‑M2/67‑48 (MQ=255)
                                                                                                                                            ccGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaac                                                                                              >  2:442035‑M2/1‑20 (MQ=255)
                                                                                                                                            ccGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTg           >  1:1013363/1‑150 (MQ=255)
                                                                                                                                             cGCTCCTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgacgcagcgctgcg          >  2:930008‑M1/1‑9 (MQ=255)
                                                                                                                                             cGCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgacgcagcgctgcg          <  2:985023‑M2/150‑132 (MQ=255)
                                                                                                                                              gCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgacgcagcgctgcgg         <  2:955727‑M2/150‑133 (MQ=255)
                                                                                                                                              gCTCCTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgacgcagcgctgcgg         <  1:587090‑M2/150‑133 (MQ=255)
                                                                                                                                              gCTCCTACAGGTTCCGCGgtaggagcgggttcacccgagaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgacgcagcgctgcgg         <  1:1022676‑M2/150‑133 (MQ=255)
                                                                                                                                                  cTACcgcggaacctgtaggagcgggttcacccgcgaagaggccgggtcaggaaatagaaacgccccggcgagccggggcgttctggggatcacacggcgttcagtgatttcagcttagcgaatacccgactgacgcagcgctgcgggctg     <  1:95273‑M1/150‑147 (MQ=255)
                                                                                                                                                  cTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggcaaggaaatagaaacgccccggcgagccggggc                                                                            >  2:1024858‑M2/1‑14 (MQ=255)
                                                                                                                                                  cTACAGGTTCCGCGgtaggagcgggttcacccgcgaagaggccgggcaaggaaatagaaacgccccggcgagccggggc                                                                            <  1:1024858‑M2/79‑66 (MQ=255)
                                                                                                                                                     cAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAAt                                                                                       <  2:757839/65‑1 (MQ=255)
                                                                                                                                                     cAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAAt                                                                                       >  1:757839/1‑65 (MQ=255)
                                                                                                                                                     cAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATAc                                                                                     <  2:427835/67‑1 (MQ=255)
                                                                                                                                                     cAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATAc                                                                                     >  1:427835/1‑67 (MQ=255)
                                                                                                                                                     cAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCcatca  <  2:42092/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GCAAGGCCGATTTCCAGCCCGCAGCGCTGCGTCAGTCGGGTATTCGCTAAGCTGAAATCACTGAACGCCGTGTGATCCCCAGAACGCCCCGGCTCGCCGGGGCGTTTCTATTTCCTGACCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAGGTTCCGCGGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCAAGGCAATCAACCTCCTGAATACCTCTCCAAACCCCCGCCCCAGCCCCTGTCCATCAGCCATGTTGCTTTTTGTCGCAGTCTTTTCCGCGCCTATTGCGCCCATCA  >  NC_002947/883716‑884014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.