New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5333243 = | 21 (1.240) | 6 (0.400) | 6/248 | 1.1 | 24.6% | intergenic (+27/‑216) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
? | NC_002947 | 5333303 = | 18 (1.190) | intergenic (+87/‑156) | gluQ/PP_5704 | glutamyl‑Q tRNA(Asp) synthetase/hypothetical protein |
CAGGGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5333404‑5333243 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTC > NC_002947/5333303‑5333427 CAGGGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCT < 1:331952/150‑1 AGGGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGGTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCGGGCCCTTTCGCGTGCATACCCGCGCCCACAGGTAGCCCACAGGCCTTGGAGGCGGCGTGGTTCCTG > 2:15120/1‑150 GCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGG < 1:228395/150‑1 TAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCAGCTCGCAGAGGTGGCCCACAGGCCTTTAAGGCTGCGTGGTTCCTGTGGGCTCGGGC > 2:149270/1‑150 TGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTG > 1:187452/1‑150 CCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAA > 1:163350/1‑103 CCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAA < 2:163350/103‑1 CACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCC > 2:208826/1‑150 AGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTG > 1:338050/1‑150 CGGCGTGGTTCCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTC < 2:187452/150‑1 CAGGGGGGATGCTAGCGGGAATCCACAGCGTTCGCCAAGGGTTTGAATTTACTGGGCTTTTGTTTTTAGGGGGGGTACCTGTGCCGGCCCTTTCGCGGGCATGCCCGCTCCCACAGGTAGCCCACAGGCCTTGAAGGCGGCGTGGTTCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5333404‑5333243 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcATGCCCGCGAAAGGGCCGGCACAGGTACCCCCCCTAAAAACAAAAGCCCAGTAAATTCAAACCCTTGGCGAACGCTGTGGATTCCCGCTAGCATCCCCCCTGCCATTTGCGCCAATAATAAGTTC > NC_002947/5333303‑5333427 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |