| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5079219 = | 51 (0.850) | 6 (0.110) | 6/228 | NT | 10.9% | noncoding (58/77 nt) | PP_t56 | tRNA‑Arg |
| ? | NC_002947 | 5079392 = | 50 (0.880) | noncoding (35/77 nt) | PP_t55 | tRNA‑Arg | |||||
GCCACTTTCTTGAAGTGGTTCTGCTTGAAAAGCCATTTCAGTAAGCCAGTGGTAACCTGGTCTAAAACTACCATCACGGACTCATAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGC‑AGGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5079353‑5079219‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttcgTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGATTGGCAGTTTTAAACCA > NC_002947/5079392‑5079447 GCCACTTTCTTGAAGTGGTTCTGCTTGAAAAGCCATTTCAGTAAGCCAGTGGTAACCTGGTCTAAAACTACCATCACGGACTCATAGCTCAGCTGGATAGAGTACTCGGCTACGAACC‑TGCGACCGCTCGGTTCGTAGCCGAGTACT < 1:556287/147‑1GCCACTTTCTTGAAGTGGTTCTGCTTGAAAAGCCATTTCAGTAAGCCAGTGGTAACCTGGTCTAAAACTACCATCACGGACTCATAGCTCAGCTGGATAGAGTACTCGGCTACGAACC‑TGCGACCGCTCGGTTCGTAGCCGAGTACT > 2:556287/1‑147 TCGGCTACGAACCGAGCGGTCGC‑AGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGATTGGCAGTTTTAAACCA > 1:933586/1‑86 TCGGCTACGAACCGAGCGGTCGC‑AGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGATTGGCAGTTTTAAACCA < 2:933586/86‑1 CGAACCGAGCGGTCGC‑AGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGATTGGCAGTT > 1:1284778/1‑71 CGAACCGAGCGGTCGC‑AGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGATTGGCAGTT < 2:1284778/71‑1 GCCACTTTCTTGAAGTGGTTCTGCTTGAAAAGCCATTTCAGTAAGCCAGTGGTAACCTGGTCTAAAACTACCATCACGGACTCATAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGC‑AGGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5079353‑5079219‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttcgTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGCGATTGGCAGTTTTAAACCA > NC_002947/5079392‑5079447 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |