New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5079219 = | 51 (0.850) | 6 (0.110) | 6/228 | NT | 10.9% | noncoding (58/77 nt) | PP_t56 | tRNA‑Arg |
? | NC_002947 | 5079392 = | 50 (0.880) | noncoding (35/77 nt) | PP_t55 | tRNA‑Arg |
TGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACTTCAAGAAAGTGGCGGACTC > NC_002947/5079074‑5079359 | tGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAAc < 1:1632730/150‑1 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑Gc < 1:37815/150‑1 (MQ=255) gCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑Gc < 1:1364499/150‑1 (MQ=255) tCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCg > 1:1009653/1‑150 (MQ=255) gCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTc > 2:34670/1‑150 (MQ=255) cAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGt > 2:1313936/1‑150 (MQ=255) cAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGt > 1:583035/1‑150 (MQ=255) acacCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGa < 1:1313936/150‑1 (MQ=255) ccGAAATCATTACAGAAGAGCGTAGATCGACAGGCTAAAGAATTCATTGGCGAACAAACAAAAAGCGCGCTCTATGGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGCACCT‑GCGACCGCTCGGTTCGTAGCCGAGTa < 1:300138/150‑1 (MQ=38) cAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTGTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTActc > 2:132501/1‑150 (MQ=255) cATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGAc > 1:1341923/1‑122 (MQ=255) cATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGAc < 2:1341923/122‑1 (MQ=255) cAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCt < 2:286450/150‑1 (MQ=255) gagCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCt > 2:447105/1‑150 (MQ=255) gACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTg > 2:1195776/1‑150 (MQ=255) aCAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGa > 2:426980/1‑135 (MQ=255) aCAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGa < 1:426980/135‑1 (MQ=255) aCAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGa < 1:447105/150‑1 (MQ=255) cAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGAt > 2:448465/1‑150 (MQ=255) cTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTa > 1:1082444/1‑150 (MQ=255) aaGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGtt > 2:555788/1‑150 (MQ=255) ttCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGa < 2:594283/150‑1 (MQ=255) ttCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGa < 2:583035/150‑1 (MQ=255) ttGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGa < 2:416090/125‑1 (MQ=255) ttGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGa > 1:416090/1‑125 (MQ=255) aacaaaAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTg < 1:448465/150‑1 (MQ=255) aacaaaAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCACGTTACCACTg > 2:5457/1‑150 (MQ=255) aaaaaGCCCGCTCAATAGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAg < 1:1036262/113‑1 (MQ=255) aaaaaGCCCGCTCAATAGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAg > 2:1036262/1‑113 (MQ=255) tggtttaaaactgccaatcgcggactcatagctcagctggatagagtactcggctaCGAACCT‑GCGACCGCTCGGTTCGTAGCCGa > 1:933586‑M1/57‑86 (MQ=255) tggtttaaaactgccaatcgcggactcatagctcagctggatagagtactcggctaCGAACCT‑GCGACCGCTCGGTTCGTAGCCGa < 2:933586‑M1/30‑1 (MQ=255) gCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTa < 1:519916/147‑1 (MQ=255) gCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTa > 2:519916/1‑147 (MQ=255) cccGCTCAATAGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGa > 2:962793/1‑150 (MQ=255) cGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGaaa > 2:474856/1‑150 (MQ=255) gCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAAt < 1:555788/150‑1 (MQ=255) gCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTAGCCAACTAAGCTATGCGTCCGCGATGGGAATTTTATCACAGGGTAACAGTGTCTTAATGAAAt > 2:645983/1‑150 (MQ=18) ctctATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt > 1:348566/1‑100 (MQ=255) ctctATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt < 2:348566/100‑1 (MQ=255) aactgccaatcgcggactcatagctcagctggatagagtactcggctaCGAACCT‑GCGACCGCTCGGTTCg < 2:1284778‑M1/23‑1 (MQ=255) aactgccaatcgcggactcatagctcagctggatagagtactcggctaCGAACCT‑GCGACCGCTCGGTTCg > 1:1284778‑M1/49‑71 (MQ=255) gCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCaa < 1:962793/150‑1 (MQ=255) gCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCaa < 2:367635/150‑1 (MQ=255) gggCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCa > 1:1021761/1‑115 (MQ=255) gggCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCa < 2:1021761/115‑1 (MQ=255) ttttGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAAc < 1:1195776/150‑1 (MQ=255) aTGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt < 1:731446/79‑1 (MQ=255) aTGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt > 2:731446/1‑79 (MQ=255) aTGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACtt < 1:474856/150‑1 (MQ=255) gggTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACTTCaa < 2:1009653/150‑1 (MQ=255) gggTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACTTCaa < 1:132501/150‑1 (MQ=255) gTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt < 2:1532064/74‑1 (MQ=34) gTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTAt > 1:1532064/1‑74 (MQ=34) ggACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACTTc < 2:1540670/139‑1 (MQ=255) ggACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACTTc > 1:1540670/1‑139 (MQ=255) agtactcggctaCGAACCGAGCGGTCGCA‑GGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACTTCAAGAAAGTGGc < 1:556287‑M1/135‑1 (MQ=255) agtactcggctaCGAACCGAGCGGTCGCA‑GGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACTTCAAGAAAGTGGc > 2:556287‑M1/13‑147 (MQ=255) agcagGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGTTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACTTCAAGAAAGTGGCGGACTc > 1:1588190/1‑150 (MQ=255) ggATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTAc > 1:84024/1‑89 (MQ=255) ggATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTAc < 2:84024/89‑1 (MQ=255) | TGAGGCCGCTCAGCGGCTCCAAACTACACCGCAATCATTACAGAAGAGCGTAGATCGACAGGCTCAAGAATTCATTGGCGCACAAACAAAAAGCCCGCTCTATTGAGCGGGCTTTTTGATGGGGTATGGCGGACTCAGCAGGATTCGAACCT‑GCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTATGAGTCCGTGATGGTAGTTTTAGACCAGGTTACCACTGGCTTACTGAAATGGCTTTTCAAGCAGAACCACTTCAAGAAAGTGGCGGACTC > NC_002947/5079074‑5079359 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |