New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1976257 =82 (1.370)7 (0.130) 7/212 NT 8.9% intergenic (+42/‑123) pheA/PP_1770 bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase
?NC_002947 1976305 = 70 (1.320)intergenic (+90/‑75) pheA/PP_1770 bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase

Only 100 of 118 total aligned reads displayed.

TCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTGGTCGGTCTAGGCCTGATCGGC  >  NC_002947/1976157‑1976454
                                                                                                                                                    |                                                                                                                                                     
tCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTa                                                                                                                                                      >  1:404269/1‑150 (MQ=255)
      tttttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcagcccttcgcgggcatGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCcgc                                                                                                                                                <  1:75121‑M1/56‑1 (MQ=255)
         ttgctgcatttaccactggtgcgaaccctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcagcccttcgcgggcatGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGaa                                                                                                                                             >  2:75121‑M1/92‑150 (MQ=255)
          ggCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAg                                                                                                                                            <  2:1567065/150‑1 (MQ=255)
              gtgGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGgcc                                                                                                                                        >  1:376933/1‑150 (MQ=255)
                         ggTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGcc                                                                                                                             >  2:647451/1‑150 (MQ=255)
                          gTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGTGAGCGGGCTAGCCCGCGAAGGGCCGCGGCGCGGccc                                                                                                                            <  2:145280/150‑1 (MQ=255)
                          gTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCGTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGccc                                                                                                                            >  2:1191121/1‑150 (MQ=255)
                            gCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTGGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGGCGCGGccctt                                                                                                                          <  1:254772/150‑3 (MQ=255)
                               gggCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATg                                                                                                                       <  1:1037415/150‑1 (MQ=255)
                               gggCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCCGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATg                                                                                                                       <  1:928643/150‑1 (MQ=255)
                                 gCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGc                                                                                                                     <  2:771112/150‑1 (MQ=255)
                                    ctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggcatGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAgg                                                                                                                                           <  1:923268‑M1/61‑1 (MQ=255)
                                    ctgttcagaaatctaggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggcatGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAgg                                                                                                                                           >  2:923268‑M1/65‑125 (MQ=255)
                                     ttATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTc                                                                                                                 >  2:1300735/1‑150 (MQ=255)
                                      tATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTca                                                                                                                >  1:1541509/1‑150 (MQ=255)
                                       aTCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcac                                                                                                               >  2:1539266/1‑150 (MQ=255)
                                       aTCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcac                                                                                                               >  2:1539855/1‑150 (MQ=255)
                                       aTCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGCGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcac                                                                                                               <  1:1039876/150‑1 (MQ=255)
                                        tCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAg                                                                                                                                            >  2:374772/1‑120 (MQ=255)
                                        tCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAg                                                                                                                                            <  1:374772/120‑1 (MQ=255)
                                         ccGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAg                                                                                                             <  1:582414/150‑1 (MQ=255)
                                           gAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGGCGCGGccc                                                                                                                            <  1:196824/133‑1 (MQ=255)
                                           gAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGGCGCGGccc                                                                                                                            >  2:196824/1‑133 (MQ=255)
                                                 taggtagcctgtgagggccattggggccgcggcgcggcccttcgcgggctaGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTa                                                                                                                                                      >  1:627666‑M1/52‑101 (MQ=255)
                                                 ggTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGcc                                                                                                                    <  1:140473/135‑1 (MQ=255)
                                                 ggTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGcc                                                                                                                    >  2:140473/1‑135 (MQ=255)
                                                   tGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGa                                                                                                   >  1:1422027/1‑150 (MQ=255)
                                                    gCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGAt                                                                                                  <  2:376933/150‑1 (MQ=255)
                                                      tttGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCtggctga                                                                                                <  2:404269/150‑7 (MQ=255)
                                                       ttGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTc                                                                                               >  1:1407519/1‑150 (MQ=255)
                                                        tGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCt                                                                                              <  2:32247/150‑1 (MQ=255)
                                                         gATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTg                                                                                             >  1:1617185/1‑150 (MQ=255)
                                                         gATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGAGTTCTg                                                                                             >  1:1259911/1‑150 (MQ=255)
                                                          aTTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGgc                                                                                                                                         <  2:61109/105‑1 (MQ=255)
                                                          aTTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGgc                                                                                                                                         >  1:61109/1‑105 (MQ=255)
                                                           ttCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTTTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTATATTTCTGat                                                                                           <  2:628061/150‑2 (MQ=255)
                                                              aGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAg                                                                                        <  1:647451/150‑1 (MQ=255)
                                                              aGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAg                                                                                        >  1:319149/1‑150 (MQ=255)
                                                               ggggCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcaca                                                                                                              <  2:162956/127‑1 (MQ=255)
                                                               ggggCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCCGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcacc                                                                                                              >  1:162956/1‑126 (MQ=255)
                                                                       ggggCTACCTTGCAGCCCTTCGCGGGCATGCCCGCTCGCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCAc                                                                               >  2:643772/1‑150 (MQ=255)
                                                                          gCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAg                                                                            >  2:1310566/1‑150 (MQ=255)
                                                                           cTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGTTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGt                                                                           >  1:265249/1‑150 (MQ=255)
                                                                               cTTGCAGCCCTTCGCGGGCATGCCCTCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGaa                                                                                           >  2:369356/1‑130 (MQ=255)
                                                                               cTTGCAGCCCTTCGCGGGCATGCCCTCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGaa                                                                                           <  1:369356/130‑1 (MQ=255)
                                                                                 tGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTATATTTCTGAACAGGGTTCGCACCAGTGGTaaa                                                                     <  1:1118801/150‑1 (MQ=255)
                                                                                  gCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAAt                                                                    <  1:525898/150‑1 (MQ=255)
                                                                                  gCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAAt                                                                    <  1:720064/150‑1 (MQ=255)
                                                                                     gCCCTTTGCGGGCATTCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATgca                                                                 <  1:685319/150‑1 (MQ=255)
                                                                                       ccttcgcgggctagcccgctcccacagagatcggcatcacatgctcactgtgggagcgggcATGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAg                                                                                        >  2:923268‑M2/62‑125 (MQ=255)
                                                                                       ccttcgcgggctagcccgctcccacagagatcggcatcacatgctcactgtgggagcgggcATGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAg                                                                                        <  1:923268‑M2/64‑1 (MQ=255)
                                                                                        cTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGCTCTGTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCCTTGGTAGATgctgta                                                              >  2:422164/1‑146 (MQ=255)
                                                                                         ttcgcgggctagcccgctcccacagagatcggcatcacatgctcactgtgggagcgggcATGCCCGCGAAGGGCTGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCaa                                                             >  2:75121‑M2/60‑150 (MQ=255)
                                                                                            gcgggctagcccgctcccacagagatcggcatcacatgctcactgtgggagcgggcATGCCCGCGAAGGGCTGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCaaaaa                                                          <  1:75121‑M2/94‑1 (MQ=255)
                                                                                            gcgGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCaaaaa                                                          <  1:545050/150‑1 (MQ=255)
                                                                                                gCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAaaaccaa                                                      >  2:776403/1‑150 (MQ=255)
                                                                                                  tagcccgctcccacagagatcggcatcacatgctcactgtgggagcgggcTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTa                                                                                                     <  2:627666‑M2/51‑1 (MQ=255)
                                                                                                  tagcccgctcccacagagatcggcatcacatgctcactgtgggagcgggcTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTa                                                                                                     >  1:627666‑M2/51‑101 (MQ=255)
                                                                                                    GCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcaca                                                                                                              <  1:1194908‑M1/90‑1 (MQ=255)
                                                                                                    GCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTcaca                                                                                                              >  2:1194908‑M1/1‑90 (MQ=255)
                                                                                                    GCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAAccc                                                  <  1:886792‑M1/150‑1 (MQ=255)
                                                                                                     CCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCcg                                                 >  1:776403‑M1/1‑150 (MQ=255)
                                                                                                      CCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCAc                                                                               >  1:1480188‑M1/1‑119 (MQ=255)
                                                                                                      CCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCAc                                                                               <  2:1480188‑M1/119‑1 (MQ=255)
                                                                                                            CCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCa                                                                             <  1:452351‑M1/115‑1 (MQ=255)
                                                                                                            CCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCa                                                                             >  2:452351‑M1/1‑115 (MQ=255)
                                                                                                            CCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCcat                                          <  2:1128802‑M1/150‑1 (MQ=255)
                                                                                                            CCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCcat                                          <  1:795798‑M1/150‑1 (MQ=255)
                                                                                                            CCACAGTGAGCAGGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCcat                                          <  2:1594325‑M1/150‑1 (MQ=255)
                                                                                                              ACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGTTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCcatca                                        >  2:265249‑M1/1‑150 (MQ=255)
                                                                                                              ACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGAt                                                                                                  <  1:1527346‑M1/92‑1 (MQ=255)
                                                                                                              ACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGAt                                                                                                  >  2:1527346‑M1/1‑92 (MQ=255)
                                                                                                              ACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCcatca                                        <  1:220130‑M1/150‑1 (MQ=255)
                                                                                                                AGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCatcatc                                      >  1:1300735‑M1/1‑150 (MQ=255)
                                                                                                                AGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCatcatc                                      >  2:923212‑M1/1‑150 (MQ=255)
                                                                                                                  tGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCcatcatt                                      >  1:723165/1‑147 (MQ=255)
                                                                                                                  tGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCcatcatt                                      <  2:723165/148‑2 (MQ=255)
                                                                                                                    aGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGACCGCGCAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTATATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGAcc                                  <  2:183072/150‑1 (MQ=255)
                                                                                                                      cATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAAc                                                                                          >  2:1601880/1‑92 (MQ=255)
                                                                                                                      cATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCTATCATCGACCGc                                <  2:880726/150‑1 (MQ=255)
                                                                                                                      cATGTGAGGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTCCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGc                                <  2:917451/150‑1 (MQ=255)
                                                                                                                       aTGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACAAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGcc                               <  1:1539855/150‑1 (MQ=255)
                                                                                                                       aTGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACAAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGcc                               <  1:1539266/150‑1 (MQ=255)
                                                                                                                          tgATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCtgg                            >  2:110478/1‑150 (MQ=255)
                                                                                                                            aTGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGTGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCtggtc                          <  1:422164/150‑1 (MQ=255)
                                                                                                                              gCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCtggtcgt                        >  2:657090/1‑150 (MQ=255)
                                                                                                                                cGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCtggtcgtgg                      >  2:448149/1‑150 (MQ=255)
                                                                                                                                cGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCtggtcgtgg                      >  1:1153998/1‑150 (MQ=255)
                                                                                                                                  aTCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGt                                                                        <  2:1210876/98‑1 (MQ=255)
                                                                                                                                        gtgggagcgggcTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTGGTCGGTCTa              <  1:1128802‑M2/138‑1 (MQ=255)
                                                                                                                                         tgggagcgggcTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACa                                                                                         <  1:40306‑M2/63‑1 (MQ=255)
                                                                                                                                         ccttcgcgggcTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTGGTCGGTCTAg             >  2:1184051‑M2/12‑150 (MQ=255)
                                                                                                                                           ggagcgggcTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGAGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTGGTCGGTCTAGGc           >  2:463622‑M2/10‑150 (MQ=255)
                                                                                                                                             agcgggcTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTGGTCGGTCTAGGCCt         <  2:795798‑M2/143‑1 (MQ=255)
                                                                                                                                                  gcTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAaaaccaaac                                                    >  1:349559‑M2/3‑102 (MQ=255)
                                                                                                                                                  gcTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAaaaccaaac                                                    <  2:349559‑M2/100‑1 (MQ=255)
                                                                                                                                                   cTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATgca                                                                 >  1:1416235‑M2/2‑88 (MQ=255)
                                                                                                                                                   cTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATgca                                                                 <  2:1416235‑M2/87‑1 (MQ=255)
                                                                                                                                                    tAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTGGTCGGTCTAGGCCTGATcggc  <  2:1470377/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGAGCATGTGATGCCGATCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTGGTCGGTCTAGGCCTGATCGGC  >  NC_002947/1976157‑1976454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.