New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5506609 =91 (1.030)12 (0.180) 11/190 NT 19.6% intergenic (+20/‑179) PP_4839/cycA iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease
?NC_002947 5506680 = 29 (0.430)intergenic (+91/‑108) PP_4839/cycA iron‑regulated membrane protein/D‑alanine/beta‑alanine/D‑serine/glycine permease

TGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCAC  >  NC_002947/5506536‑5506826
                                                                                                                                                 |                                                                                                                                                  
tgGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACa                                                                                                                                               <  2:1366884/150‑1 (MQ=255)
 ggggggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGATCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAg                                                                                                                                              <  1:1675794/150‑1 (MQ=255)
  gggggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGGCTTGTGTTTCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGGCCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAgg                                                                                                                                             <  2:900820/150‑1 (MQ=255)
    gggTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCg                                                                                                                                           >  1:515962/1‑150 (MQ=255)
         gcgcgttccagatcggggcgcgacagatcgactctgcattttcggctcagcatttcgcctgtgctggcctcttcgcgggtaaacccgctcctacgagggaccgcgttgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAAt                                                                                                                                       <  1:854326‑M2/14‑1 (MQ=255)
                   tggtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAg                                                                                                                                              >  2:75714/1‑132 (MQ=255)
                   tggtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAg                                                                                                                                              <  1:75714/132‑1 (MQ=255)
                   tggtgAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGaa                                                                                                                            <  1:162809/150‑1 (MQ=255)
                        ttgggccgccGTGTCTTGGCCCGCGCTTGAGAACTGTGTTGCCTGTGCTGGCCTTTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGc                                                                                                                       <  2:382604/146‑1 (MQ=37)
                             ccgccgGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGt                                                                                                                  <  2:515962/150‑1 (MQ=255)
                                ccgGGTCTTGGCCAGCGCTTGAGCATTGTGGGGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGa                                                                                                               >  1:62247/1‑150 (MQ=255)
                                      cTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGAGGACAGGTTCTCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTc                                                                                                         <  2:62247/150‑1 (MQ=38)
                                       ttGGCCAGCGCTTTAGCCTTGTGTTGCCTGTGCTGGTCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTGGTAGGAGCGGGTTTCCCCGAGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTcg                                                                                                        <  2:417276/150‑1 (MQ=38)
                                             aGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGcccc                                                                                                  <  1:1941951/150‑1 (MQ=255)
                                                 cTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATc                                                                                              <  2:183801/150‑1 (MQ=255)
                                                  ttGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCt                                                                                             <  2:675648/150‑1 (MQ=255)
                                                       ccTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAc                                                                                        <  2:2215072/150‑1 (MQ=255)
                                                        cTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGa                                                                                                               >  1:498666/1‑126 (MQ=255)
                                                        cTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGa                                                                                                               <  2:498666/126‑1 (MQ=255)
                                                           atttcgcctgtaccGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGCGGTCCCTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgc                                                                                    <  1:854326‑M1/136‑1 (MQ=255)
                                                            tgtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgcg                                                                                   <  2:945968/150‑1 (MQ=255)
                                                             gtTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCAGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCgt                                                                                  >  2:1866280/1‑150 (MQ=255)
                                                                 ccTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTta                                                                              >  1:2136995/1‑150 (MQ=255)
                                                                  cTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGt                                                                                                                                                  <  2:1577367/81‑1 (MQ=255)
                                                                  cTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGt                                                                                                                                                  >  1:1577367/1‑81 (MQ=255)
                                                                  cTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtag                                                                             >  1:1640439/1‑150 (MQ=255)
                                                                        tGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagcctagc                                                                       >  2:1647635/1‑150 (MQ=255)
                                                                          GCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTg                                                                                            <  1:1350563‑M1/127‑1 (MQ=255)
                                                                          GCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTg                                                                                            >  2:1350563‑M1/1‑127 (MQ=255)
                                                                                  GCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACctc                                                             <  2:1187700‑M1/150‑1 (MQ=255)
                                                                                    GGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTg                                                           <  1:1869588‑M1/150‑1 (MQ=255)
                                                                                      ggtaaacccgctcctacaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTg                                                                                            >  2:1158819‑M2/60‑116 (MQ=255)
                                                                                      ggtaaacccgctcctacaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTg                                                                                            <  1:1158819‑M2/57‑1 (MQ=255)
                                                                                      GTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCAGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGAc                                                         >  1:1866280‑M1/1‑150 (MQ=255)
                                                                                        AAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagccta                                                                         <  1:656482‑M1/132‑1 (MQ=255)
                                                                                        AAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagccta                                                                         >  2:656482‑M1/1‑132 (MQ=255)
                                                                                          cCCCGCTCCTACGAGGGACCGCGTTGTAGGGGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaaga                                                     >  2:1640439‑M1/2‑150 (MQ=255)
                                                                                           acccgctcctacaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAc                                                                                        <  1:752418‑M2/61‑1 (MQ=255)
                                                                                           acccgctcctacaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAc                                                                                        >  2:752418‑M2/55‑115 (MQ=255)
                                                                                           CCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATc                                                                                              >  1:1056334‑M1/1‑108 (MQ=255)
                                                                                           CCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATc                                                                                              <  2:1056334‑M1/108‑1 (MQ=255)
                                                                                           CCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACct                                                              <  2:1030646‑M1/140‑1 (MQ=255)
                                                                                           CCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACct                                                              >  1:1030646‑M1/1‑140 (MQ=255)
                                                                                            cccgctcctacaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGa                                                                                                               >  2:936981‑M2/54‑91 (MQ=255)
                                                                                            cccgctcctacaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGa                                                                                                               <  1:936981‑M2/38‑1 (MQ=255)
                                                                                            CCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaa                                                       >  1:1617479‑M1/1‑146 (MQ=255)
                                                                                            CCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaa                                                       <  2:1617479‑M1/146‑1 (MQ=255)
                                                                                             ccgctcctacaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaag                                                   >  2:203026‑M2/53‑150 (MQ=255)
                                                                                             ccgctcctacaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACaagaag                                                   >  2:428813‑M2/53‑150 (MQ=255)
                                                                                              cgctcctacaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAagaaga                                                  <  1:428813‑M2/99‑1 (MQ=255)
                                                                                                    ACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGc                                           >  2:2136995‑M1/1‑150 (MQ=255)
                                                                                                     acaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGc                                                                                                                                <  1:1905618‑M2/21‑1 (MQ=255)
                                                                                                     acaacgcggtccctcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGc                                                                                                                                >  2:1905618‑M2/45‑65 (MQ=255)
                                                                                                      gAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCg                                                                     >  1:849953/1‑122 (MQ=255)
                                                                                                      gAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCg                                                                     <  2:849953/122‑1 (MQ=255)
                                                                                                      gAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCt                                         >  1:1380793/1‑150 (MQ=255)
                                                                                                            cccGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGAc                                    <  2:1522312/149‑1 (MQ=255)
                                                                                                              cgcgTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGc                                  >  2:107607/1‑150 (MQ=255)
                                                                                                              cgcgTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGc                                  >  2:107934/1‑150 (MQ=255)
                                                                                                                cgTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCaa                                >  2:1108369/1‑150 (MQ=255)
                                                                                                                  tcgtaggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAAc                              <  1:203026‑M2/119‑1 (MQ=255)
                                                                                                                       ggagcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCAc                         >  2:1528985‑M2/27‑150 (MQ=255)
                                                                                                                        gagcgggtttacccgcgaagaggccGGTACAGGTGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagccta                                                                         >  2:495475‑M2/26‑101 (MQ=255)
                                                                                                                        gagcgggtttacccgcgaagaggccGGTACAGGTGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTtagccta                                                                         <  1:495475‑M2/76‑1 (MQ=255)
                                                                                                                          gcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCa                                             <  1:2031590‑M2/104‑1 (MQ=255)
                                                                                                                          gcgggtttacccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCa                                             >  2:2031590‑M2/24‑127 (MQ=255)
                                                                                                                            gggtttacccgcgaagaggccAGCACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCATCCTATGACGCAAACCTCACCCATa                    <  2:854326‑M2/129‑1 (MQ=255)
                                                                                                                                    ccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgc                                                                                    >  2:2048118‑M2/14‑78 (MQ=255)
                                                                                                                                    ccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAAcgcgc                                                                                    <  1:2048118‑M2/65‑1 (MQ=255)
                                                                                                                                    ccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGa            >  2:1426619‑M2/14‑150 (MQ=255)
                                                                                                                                    ccgcgaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACACGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGa            >  1:1908595‑M2/14‑150 (MQ=255)
                                                                                                                                    ccgcgaagaggccAGCACAGGCGAAATGATGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGc                                           >  1:1972042‑M2/14‑119 (MQ=255)
                                                                                                                                    ccgcgaagaggccAGCACAGGCGAAATGATGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGc                                           <  2:1972042‑M2/106‑1 (MQ=255)
                                                                                                                                        gaagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGaa        <  1:1187700‑M2/141‑1 (MQ=255)
                                                                                                                                         aagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAAc       <  1:692334‑M2/142‑1 (MQ=255)
                                                                                                                                         aagaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAAc       <  1:1647635‑M2/142‑1 (MQ=255)
                                                                                                                                          agaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAAcc      <  1:107934‑M2/143‑1 (MQ=255)
                                                                                                                                          agaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAAcc      <  1:107607‑M2/143‑1 (MQ=255)
                                                                                                                                           gaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCa                      <  1:1025540‑M2/127‑1 (MQ=255)
                                                                                                                                           gaggccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCa                      >  2:1025540‑M2/7‑133 (MQ=255)
                                                                                                                                              gccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTCGAGCTGTACCTCTGACAAGAAGACTGCAGCCTATGACACAAACCTCACCCATAGCGACAGATGAACCGCAc  >  1:145793‑M2/4‑150 (MQ=255)
                                                                                                                                              gccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCAc  <  1:1528985‑M2/147‑1 (MQ=255)
                                                                                                                                              gccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCAc  >  1:2173788‑M2/4‑150 (MQ=255)
                                                                                                                                              gccGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCAc  >  2:1034522‑M2/4‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
TGGGGGGTGGATAGTTTGGTGGTGAGGCGCCGCCGGGTCTTGGCCAGCGCTTGAGCCTTGTGTTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACGAGGGACCGCGTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGGCGAAATGCTGAGCCGAAAATGCAGAGTCGATCTGTCGCGCCCCGATCTGGAACGCGCGTGTTAGCCTAGCCGGCTACCTCTGACAAGAAGACTGCAGCCTATGACGCAAACCTCACCCATAGCGACAGATGAACCGCAC  >  NC_002947/5506536‑5506826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.