BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3941442 =	153 (1.020)	24 (0.280) +ATTCTTTATGCTTATTTCAGCGTCGGTTTGTCGGTTAAATG	6/114	13.9	21.3%	intergenic (‑115/‑366)	yieP/rrsC	putative transcriptional regulator/16S ribosomal RNA of rrnC operon
*	?	NC_000913	4035099 =	152 (1.020)	24 (0.280) +ATTCTTTATGCTTATTTCAGCGTCGGTTTGTCGGTTAAATG	6/114	13.9	21.3%	coding (492/546 nt)	hemG	protoporphyrin oxidase, flavoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 153 total aligned reads displayed.

CGCTGGTACGACCGTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAATTATTTTAAATT  >  NC_000913/4035001‑4035197

 gCTGGTACGACCGTTTTATGATCAAGCTGATTATGAAGCTGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTgg                                                                                                   <  1:3783774/99‑1 (MQ=255)

       aCGACCGTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAAtt                                                                                             <  2:2940433/99‑1 (MQ=255)

         gACCGTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGCATTTc                                                                                           >  2:2536794/1‑99 (MQ=255)

          aCCGTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCg                                                                                          <  2:951143/99‑1 (MQ=255)

          aCCGTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCg                                                                                          <  1:2636496/99‑1 (MQ=255)

             gTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGccc                                                                                       <  2:1223715/99‑1 (MQ=255)

             gTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGccc                                                                                       <  1:2657682/99‑1 (MQ=255)

              ttttATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCg                                                                                      >  2:805923/1‑99 (MQ=255)

              ttttATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCACGTGGCGAAATTCGccac                                                                                      <  1:3300481/99‑3 (MQ=255)

               gttATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCga                                                                                     <  2:3075504/98‑1 (MQ=255)

                 tATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCgaga                                                                                   >  1:3833500/1‑99 (MQ=255)

                    gATCAAGCTGATTATGAAGATGTCAGGCGGTGAACCGGATACGCGCAACGCAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAAt                                                                                <  1:2178395/99‑1 (MQ=255)

                    gATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAAt                                                                                >  1:3921492/1‑99 (MQ=255)

                    gATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAAt                                                                                >  1:2265166/1‑99 (MQ=255)

                     gtCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATc                                                                               <  2:2598920/98‑1 (MQ=255)

                     aTCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAGTTTCGCCCGAGAAATc                                                                               >  1:3257112/1‑99 (MQ=255)

                     aTCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATc                                                                               >  1:466224/1‑99 (MQ=255)

                     aTCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATc                                                                               >  1:3626964/1‑99 (MQ=255)

                      tCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCg                                                                              >  2:2152228/1‑99 (MQ=255)

                      tCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCg                                                                              <  1:2846809/99‑1 (MQ=255)

                      tCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCg                                                                              >  1:3692812/1‑99 (MQ=255)

                       cAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCTAATTTCGCCCGAGAATTCGc                                                                             <  2:1268518/99‑1 (MQ=255)

                        aaGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGcc                                                                            >  1:1883022/1‑99 (MQ=255)

                        aaGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGcc                                                                            <  1:2893565/99‑1 (MQ=255)

                        aaGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGcc                                                                            <  1:2054120/99‑1 (MQ=255)

                           cTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCAt                                                                         <  1:1614632/99‑1 (MQ=255)

                            tGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCAtt                                                                        >  2:405500/1‑99 (MQ=255)

                             gATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCAttt                                                                       <  2:193332/99‑1 (MQ=255)

                             gATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCAttt                                                                       >  1:346360/1‑99 (MQ=255)

                              aTTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTa                                                                      >  1:1483681/1‑99 (MQ=255)

                              aTTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCACTTa                                                                      >  2:2264120/1‑99 (MQ=255)

                               ttATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTaa                                                                     <  1:2402112/99‑1 (MQ=255)

                               ttATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTaa                                                                     >  2:2660353/1‑99 (MQ=255)

                                tATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAAc                                                                    <  1:2600766/99‑1 (MQ=255)

                                tATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAAc                                                                    <  2:2871284/99‑1 (MQ=255)

                                 aTGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATGGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAAcc                                                                   <  2:1819378/99‑1 (MQ=255)

                                 aTGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGGTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAAcc                                                                   <  2:890565/99‑1 (MQ=255)

                                  tGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCg                                                                  >  2:2945293/1‑99 (MQ=255)

                                   gAAGATGTCAGGCGGTGAACCGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGa                                                                 >  2:3534966/1‑99 (MQ=255)

                                   gAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGa                                                                 >  1:1014174/1‑99 (MQ=255)

                                   gAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGa                                                                 >  1:847703/1‑99 (MQ=255)

                                   gAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGa                                                                 <  1:2723826/99‑1 (MQ=255)

                                   gAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGa                                                                 >  2:594926/1‑99 (MQ=255)

                                       aTGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACaaa                                                             >  2:3714271/1‑99 (MQ=255)

                                       aTGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCAGAGAAATCGCCCATTTAACCGACaaa                                                             >  2:3721324/1‑99 (MQ=255)

                                         gTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAAcc                                                           >  2:2539782/1‑99 (MQ=255)

                                          tCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCg                                                          <  1:2102281/99‑1 (MQ=255)

                                          tCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCg                                                          >  1:3328026/1‑99 (MQ=255)

                                            aGGCGGTGAAACGGATACGCGCATAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGAc                                                        >  1:3697716/1‑99 (MQ=255)

                                              gCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGc                                                      >  1:2366952/1‑99 (MQ=255)

                                               cGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCt                                                     <  1:1853177/99‑1 (MQ=255)

                                                    aaaCGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAAt                                                >  2:1927046/1‑99 (MQ=255)

                                                    aaaCGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAAt                                                >  1:2484053/1‑99 (MQ=255)

                                                    aaaCGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAAt                                                >  1:2220645/1‑99 (MQ=255)

                                                      aCGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATaa                                              <  1:3127089/99‑1 (MQ=255)

                                                        ggATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGc                                            <  2:3270262/99‑1 (MQ=255)

                                                           tACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATa                                         <  1:1523877/99‑1 (MQ=255)

                                                             cgcgCAAAGAAGTTGTCTATACCGATTGGGAGGAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATaaa                                       <  2:233387/99‑1 (MQ=255)

                                                              gcgcAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGGAATCGCCCATTTAACCGACAACCCGACGCTGAAATAAGCATAAAg                                      >  2:3477966/1‑99 (MQ=255)

                                                                gcAATGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGACATCGCCCATTTAACCGACAAATCGACGCTGAAATAAGCATAAAGaa                                    <  1:3544148/99‑1 (MQ=255)

                                                                gcAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGaa                                    >  1:71672/1‑99 (MQ=255)

                                                                gcAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGaa                                    <  2:1429997/99‑1 (MQ=255)

                                                                 cAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAAt                                   <  1:194155/99‑1 (MQ=255)

                                                                  aaaGAGGTTGTCTATACCGAATGGGAGCAGGTGGCGAATTTCGCCCGAGAAATTCCCAATTTAACCGACAAACCGACGCTGAAGTAAGCATAAAGAATa                                  >  2:3663239/1‑99 (MQ=255)

                                                                  aaaGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATa                                  >  2:660738/1‑99 (MQ=255)

                                                                  aaaGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATa                                  >  1:3162937/1‑99 (MQ=255)

                                                                   aagaagTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATaa                                 <  1:3211277/99‑1 (MQ=255)

                                                                     gaagTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATaaaa                               <  2:3206719/99‑1 (MQ=255)

                                                                        gTTGTCTATACCGATTGGGAGCAAGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAAt                            <  2:2460143/99‑1 (MQ=255)

                                                                         ttGTCTATACGGATTGGTAGCACGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCCACAAGCAGCCGCTGAAATAGGCATAAAGAATAAAAAATg                           >  2:559369/1‑99 (MQ=255)

                                                                         ttGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATg                           >  2:1613535/1‑99 (MQ=255)

                                                                            tCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATgcgc                        <  2:3823764/99‑1 (MQ=255)

                                                                            tCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATgcgc                        >  2:1763811/1‑99 (MQ=255)

                                                                             cTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGcgcg                       >  1:1558202/1‑99 (MQ=255)

                                                                             cTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGcgcg                       <  2:2780589/99‑1 (MQ=255)

                                                                             cTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGcgcg                       <  1:1177125/99‑1 (MQ=255)

                                                                             cTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGcgcg                       <  2:472197/99‑1 (MQ=255)

                                                                             cTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGcgcg                       <  2:775217/99‑1 (MQ=255)

                                                                              tataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCgg                      >  2:1857942/1‑99 (MQ=255)

                                                                              tataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCGGAAATAAGCATAAAGAATAAAAAATGCGCgg                      >  1:920812/1‑99 (MQ=255)

                                                                               ataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGt                     <  2:1301639/99‑1 (MQ=255)

                                                                               ataCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGt                     >  2:1196512/1‑99 (MQ=255)

                                                                               ataCCGATTGGGAGCAGGTGGCGAATGTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGt                     <  2:3149355/99‑1 (MQ=255)

                                                                                taCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGGCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTc                    <  1:1937462/99‑1 (MQ=255)

                                                                                taCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTc                    <  2:2404530/99‑1 (MQ=255)

                                                                                 aCCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCa                   >  1:552508/1‑99 (MQ=255)

                                                                                  ccGATTGGGAGCAGGTGGCGAATTTCGCTCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCTGTCAg                  >  1:3753311/1‑99 (MQ=255)

                                                                                     aTTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGaaa               >  1:3593491/1‑99 (MQ=255)

                                                                                     aTTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGaaa               <  1:2905293/99‑1 (MQ=255)

                                                                                     aTTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGaaa               >  2:3370689/1‑99 (MQ=255)

                                                                                      ttGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGaaaa              >  2:907106/1‑99 (MQ=255)

                                                                                      ttGGGAGCAGGTGGCGAATTGCGCCCGAGAAATAGCCCATTTAACCGACAAATCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGaaaa              <  2:3727117/99‑1 (MQ=255)

                                                                                         ggAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAatta           >  1:116967/1‑99 (MQ=255)

                                                                                           aGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAattatt         >  2:1103944/1‑99 (MQ=255)

                                                                                            gCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAATTAttt        <  1:3013473/99‑1 (MQ=255)

                                                                                             cAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAATTAtttt       <  1:2707505/99‑1 (MQ=255)

                                                                                              aGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAATTATTTTa      >  1:103610/1‑99 (MQ=255)

                                                                                               ggTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAATTATTTTaa     <  2:1407675/99‑1 (MQ=255)

                                                                                                gTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAATTATTTTaaa    >  2:1048264/1‑99 (MQ=255)

                                                                                                gTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAATTATTTTaaa    >  1:290643/1‑99 (MQ=255)

CGCTGGTACGACCGTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAAGCATAAAGAATAAAAAATGCGCGGTCAGAAAATTATTTTAAATT  >  NC_000913/4035001‑4035197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.