New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 16941 =NA (NA)23 (0.020) 10/148 NT 100% coding (121/675 nt) USA300HOU_pUSA300HOUMR0021 IS431 mec transposase
?CP000731 16948 = 0 (0.000)coding (114/675 nt) USA300HOU_pUSA300HOUMR0021 IS431 mec transposase

Only 100 of 274 total aligned reads displayed.

AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAacgttc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000731/17030‑16941
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  >  CP000731/16948‑17043
                                                                                                                                                                                          
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 >  1:1055852/1‑91
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 >  2:1154880/1‑91
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 <  1:1022602/91‑1
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 >  2:284335/1‑91
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 <  1:2343801/91‑1
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 >  1:2174575/1‑91
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAA                                                                                                 >  1:1162837/1‑91
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                <  2:1408109/91‑1
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                >  1:3969684/1‑91
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                >  1:4863017/1‑91
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                <  2:5052000/91‑1
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                >  1:1238789/1‑91
 GGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAAC                                                                                                >  2:3839421/1‑91
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGCTATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               >  2:596505/1‑91
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:2455151/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  2:4468193/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:4620478/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:5211500/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               >  1:3325438/1‑91
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:5552372/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  2:3731477/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  2:1567913/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  2:629993/91‑1
  GATGTTATCACTGTAGCCGTTGGCTACTATCGAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACG                                                                                               <  1:5245953/91‑1
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              <  2:127999/91‑1
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              >  2:1657436/1‑91
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              <  1:436818/91‑1
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              >  2:3553030/1‑91
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              <  1:3477156/91‑1
   ATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGT                                                                                              >  1:3034388/1‑91
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             >  2:4852348/1‑91
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             >  2:4584030/1‑91
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             >  1:1815683/1‑91
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             >  1:2501252/1‑91
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             <  1:2948230/91‑1
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             >  1:869348/1‑91
    TGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGAATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTT                                                                                             >  2:3311153/1‑91
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  1:4161465/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  1:1424518/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  2:3484362/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  2:3244329/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  2:2737107/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  2:1430393/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            >  2:1044886/1‑91
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  1:5648897/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  1:3863114/91‑1
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            >  1:3675956/1‑91
     GTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            <  1:5015517/91‑1
     GTTATAACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCAATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTC                                                                                            >  2:5545860/1‑91
                                      TATGCATTGAGCCATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAA                                                           >  2:2677650/1‑91
                                                   ATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAACGATCTCTCATTATTCAAGACATAACACGATAGCACAATGCATATCTTAaa                                              >  2:2290328/1‑89
                                                                         AAGAGAACGTGGTGTAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGA                        >  1:4038706/1‑91
                                                                         AAGAGAACGTGGTGTAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGA                        >  2:3385249/1‑91
                                                                             GAACGTGGTGTAAACGTTCCCTTAATATTTCAGATATATCACGATAACTCAATGCATATCTTAGATAGTAGCCAACAGCTACAGTGATAAC                    >  1:3134867/1‑91
                                                                                  TGGTGTAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCT               >  1:2773559/1‑91
                                                                                    GTGTAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTG             >  2:3516920/1‑91
                                                                                       TAAACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTA          >  2:5329590/1‑91
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTCGCTAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  2:253329/91‑1
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  2:2004858/91‑1
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       >  1:3173446/1‑91
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  2:1852621/91‑1
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       >  1:426706/1‑91
                                                                                          ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAT       <  2:4548905/91‑1
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      >  1:2597405/1‑91
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      >  1:3387141/1‑91
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      >  2:3174126/1‑91
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      >  2:3111571/1‑91
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      >  2:3099326/1‑91
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      <  2:1927002/91‑1
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      <  2:5195292/91‑1
                                                                                           CGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATT      >  2:2169737/1‑91
                                                                                            GTTCTCTTAATATTTCAGATATATCTCGATAGCTGAATGCATATCTTAGATAGTAGGCAACGGCTACAGTGATAACATCCTTGTTAAATTG     >  2:4730430/1‑91
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     <  2:5271299/91‑1
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     <  2:5082801/91‑1
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     >  2:933584/1‑91
                                                                                            GTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTG     <  1:5448070/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  1:4430563/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  1:859741/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  2:5433715/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  2:208177/91‑1
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    >  1:395961/1‑91
                                                                                             TTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGT    <  2:2876065/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  2:4818018/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  1:624511/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  2:793293/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   >  1:1569069/1‑91
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   >  1:4789186/1‑91
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   >  2:4655390/1‑91
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  1:1716859/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  2:430799/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  2:4182046/91‑1
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   >  2:4039551/1‑91
                                                                                              TCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  1:1940619/91‑1
                                                                                              TCTCTTAAGATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTT   <  2:4261881/91‑1
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  >  2:2656292/1‑91
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  <  1:4821773/91‑1
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  <  1:5103871/91‑1
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  >  1:5503220/1‑91
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  <  1:120305/91‑1
                                                                                               CTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAAATGTTT  >  1:2890017/1‑91
                                                                                                                                                                                          
AGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTAAacgttc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000731/17030‑16941
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACGTTCTCTTAATATTTCAGATATATCACGATAGCTCAATGCATATCTTAGATAGTAGCCAACGGCTACAGTGATAACATCCTTGTTAAATTGTTT  >  CP000731/16948‑17043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.