| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2561201 = | 247 (0.860) | 13 (0.050) | 11/132 | NT | 6.7% | intergenic (+30/+33) | USA300HOU_RS13195/cpdA | hypothetical protein/3',5'‑cyclic adenosine monophosphate phosphodiesterase CpdA |
| ? | USA300TCH1516_ALE | 2561237 = | 159 (0.670) | coding (804/807 nt) | cpdA | 3',5'‑cyclic adenosine monophosphate phosphodiesterase CpdA | |||||
Only 100 of 112 total aligned reads displayed.
TCCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2561303‑2561201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgcgcattttaAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATA > USA300TCH1516_ALE/2561237‑2561326 TCCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGT > 1:1044265/1‑91TCCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGT < 2:4128834/91‑1TCCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGT > 1:303170/1‑91 CCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTT < 2:4203808/91‑1 CCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTT < 2:3178808/91‑1 CCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTT > 2:5437780/1‑91 CCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTT < 2:2997702/91‑1 CCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTT > 2:4842836/1‑91 CAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTT > 2:3262321/1‑91 CAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTT > 2:1943157/1‑91 CAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTT > 1:1871020/1‑91 CAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTT > 1:3990033/1‑91 CAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTT > 1:1270117/1‑91 CAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCAGACCCAGTTT > 1:5628479/1‑91 AAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTG > 1:3528825/1‑91 AAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTG < 1:916198/91‑1 AAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTG > 1:1312808/1‑91 AAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTG < 1:5067852/91‑1 AGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCGAACCTGACCCAGTTTGC < 1:4513807/91‑1 AGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGC > 1:1030695/1‑91 AGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGC > 2:4376887/1‑91 GACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCG < 1:2546026/91‑1 GACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCG > 1:3904912/1‑91 GACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCG > 2:5055270/1‑91 GACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCG < 1:2401958/91‑1 ACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGC < 2:4291156/91‑1 ACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGC < 2:5090192/91‑1 ACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGC > 2:5189493/1‑91 CAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCA > 1:1612309/1‑91 AATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACATGACCCAGTTTGCGCAT < 1:4276148/91‑1 AATGGCGTTCAGAAGATATGTACCAGTAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCAT < 2:3791945/91‑1 ATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATT > 2:11312/1‑91 ATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATT > 2:11279/1‑91 ATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATT < 2:105063/91‑1 ATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATT > 2:1044460/1‑91 ATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATT > 1:4667531/1‑91 ATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATT < 2:876648/91‑1 ATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATT > 1:1275638/1‑91 ATGGCGTTCAGAAGATATTTAACAGGAAAGAAATGAGACGATACAAATAATAGAAATTTATAATGCGCAAACCTGACCCAGTTTGCGCATT < 2:1951196/91‑1 gGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTT < 2:3634137/90‑1 TGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAGATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTT > 2:5466317/1‑91 TGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTT < 1:1739164/91‑1 TGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTT < 1:285645/91‑1 TGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTT > 2:3140270/1‑91 TGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTT > 1:3853041/1‑91 TGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTT < 1:401676/91‑1 GGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTT > 1:470226/1‑91 GGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTT > 1:2400178/1‑91 GGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTT < 1:2877352/91‑1 GGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTT < 1:663894/91‑1 GGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTT > 1:858197/1‑91 GCGTTCAGAAGATATTTACCAGGAGATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA < 1:5349259/91‑1 GCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGCTACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA > 1:4320425/1‑91 GCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTc > 1:4320410/1‑90 GCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA < 2:22409/91‑1 GCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA > 2:28853/1‑91 GCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA > 1:1820353/1‑91 GCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA > 1:634072/1‑91 GCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA > 2:1787323/1‑91 GCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA > 2:4054022/1‑91 GCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA < 2:5586125/91‑1 AAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCT > 2:2894283/1‑91 AATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCA < 2:2027527/58‑1 AATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCA > 1:2027527/1‑58 GAGACGATACAAATAATAGAAATTTAAAATGCGCAAACTGGGTCAGGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATT < 1:4528260/91‑1 AAATGCGTAAACCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCA > 1:987876/1‑91 AATGCGCAAACCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCAT > 1:1522480/1‑91 CAAACCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTT > 2:2980101/1‑91 AACCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGG > 1:5566542/1‑91 ACCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGA > 1:4239520/1‑91 ACCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGA > 1:3057490/1‑91 CCTGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGAT > 1:3095303/1‑91 TGACCCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAG > 2:742263/1‑91 CCAGTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTA > 2:234093/1‑91 GTTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGAC < 2:1818648/91‑1 TTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACc > 2:3917266/1‑90 TTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACA < 2:2871615/91‑1 TTTGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACA > 1:1511730/1‑91 TGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACG < 1:2061391/91‑1 TGCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACG < 1:2688609/91‑1 GCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGG > 2:2759238/1‑91 GCGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCGTGGATAGCCTAGACACGG < 1:5526748/91‑1 CGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGA > 2:4744362/1‑91 CGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGA < 1:4051739/91‑1 CGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGA > 1:2548909/1‑91 CGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGA < 1:5567698/91‑1 CGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGA < 2:2556413/91‑1 CGCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGA > 1:868262/1‑91 GCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGAC < 2:217481/91‑1 GCATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGAC > 1:3361883/1‑91 CATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACA < 2:3856287/91‑1 CATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACA > 2:1462586/1‑91 CATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACA < 1:3515109/91‑1 CATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACA < 2:743289/91‑1 ATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAG < 2:3601710/91‑1 ATTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAG < 1:2939435/91‑1 TTTTAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGA > 1:483896/1‑91 TAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGAT < 2:2951666/91‑1 TAAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGATAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGAT < 1:4669621/91‑1 AAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATA > 2:4763771/1‑91 TCCAAGACAATGGCGTTCAGAAGATATTTACCAGGAAATAAATGAGACGATACAAATAATAGAAATTTAAAATGCGCAAACCTGACCCAGTTTGCGCATTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2561303‑2561201‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgcgcattttaAATTTCTATTATTTGTATCGTCTCATTTATTTCCTGGTAAATATCTTCTGAACGCCATTGTCTTGGATAGCCTAGACACGGACAGAGATA > USA300TCH1516_ALE/2561237‑2561326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |