Predicted mutation
evidence seq id position mutation freq annotation gene description
JC CP000731 6,552 +TCTCCAGGCACTTGTGCATATTCTGAAA 100% intergenic (+1069/‑419) cadX → / → USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 = 65520 (0.000)443 (1.210)
+TCTCCAGGCACTTGTGCATATTCTGAAA
126/190 NT 100% intergenic (+1069/‑419) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator
?CP000731 6553 = 0 (0.000)intergenic (+1070/‑418) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

Only 100 of 718 total aligned reads displayed.

AATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000731/6420‑6552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT  >  CP000731/6553‑6685
                                                                                                                                     ||||||||||||||||||||||||||||                                                                                                                                      
   TTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTTGTTCAATATTTGATATTGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTC                                                                                                                                                                <  1:2811380/134‑1
      AGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCAACTCTCCAG                                                                                                                                                             >  1:1545191/1‑134
       GGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGG                                                                                                                                                            >  1:1458028/1‑134
        tTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGC                                                                                                                                                           <  2:463561/133‑1
        GTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGC                                                                                                                                                           <  2:2354237/134‑1
        GTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGC                                                                                                                                                           >  2:1610854/1‑134
         TTGTGATTTGATATTCATTTCATATTTTTCTATTTTAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTTTCCAGGCA                                                                                                                                                          <  2:2477950/134‑1
           GTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTACCATATACCATAGACTCATTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACT                                                                                                                                                        >  1:2662530/1‑134
             GATTTGATCTTCATTCCTTATTTTTCTAGTTCAATAATTGATAATGCTGCCGTAAAACCGGCTGTGCCTTATTCCATAGACTCTGTACTAGACATTCATTGGGTAATAGGAACAATCCACTCTCCAGGCACTTG                                                                                                                                                      <  2:629319/134‑1
              ATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTTATAATGCTGCTGTAAAACTGGCTGTGCCATATACCAAAGACTCTTAAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGT                                                                                                                                                     <  1:957053/134‑1
                  GATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCAT                                                                                                                                                 >  2:2269803/1‑134
                       TCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTTCATATTCT                                                                                                                                            >  2:1500927/1‑134
                        CATTCCATATTTTTCTATTTCAAAATTTCATTATGCTGTCGTAAAACCGGCTTTGCTATATATTATTGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                           <  1:9150/134‑1
                        CATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                           >  2:519007/1‑134
                        CATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                           <  2:1881919/134‑1
                        CATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTACAGGCACTTGTGCATATTCTG                                                                                                                                           >  2:1230754/1‑134
                        CATTCCATATTTTGCTAGTACAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                           <  1:2873005/134‑1
                           TCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAATACAGGATATTCCATATACTATATTCTCTTTTATAGACATTTCTTGGGGAATAGGAACAATCCGCTCTCCAGGCACTTGTGCATATTCTGAAA                                                                                                                                        <  1:1809801/134‑1
                            CCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAA                                                                                                                                       >  2:1575493/1‑134
                            CCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTATACATATTCTGAAAA                                                                                                                                       >  1:1304538/1‑134
                             CATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACTGGGTGTACCATATACCATCGACTCTTTAATAGACATGTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAAT                                                                                                                                      <  1:1090216/134‑1
                                   TTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTATGCATATTCTGAAAATCAACCT                                                                                                                                >  2:1121976/1‑134
                                      ccAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAAGCACTTGTGCATATTCTCAAAATCCACCTATA                                                                                                                             >  2:2522173/3‑134
                                      CTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTA                                                                                                                             >  1:2033893/1‑134
                                        AGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTCTATG                                                                                                                           >  2:2566615/1‑134
                                         GTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTACTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGT                                                                                                                          <  1:610338/134‑1
                                                AATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATTCCATATACTTTTTAATATTCTTTTTTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGC                                                                                                                  <  1:1139754/134‑1
                                                AATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATCGACTCTTTAATATACATTTCTTGGGGAATAGGAACAATCCAATATCCAGACACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGC                                                                                                                  >  1:995303/1‑134
                                                   TGATATTGCTGCCGTAAAACCGGCTGTGCCATATTCCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAA                                                                                                               <  1:2222607/134‑1
                                                   TGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAA                                                                                                               <  1:430609/134‑1
                                                   TGATAATGCTGCCGTAAAACCGGCTGTGCCATATACAATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGCATGCGCCACGCCAA                                                                                                               >  2:2008313/1‑134
                                                      TAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCAAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACAT                                                                                                            >  1:1894497/1‑134
                                                      TAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAAGCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACAT                                                                                                            <  2:343963/134‑1
                                                        ATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCA                                                                                                          <  2:1682669/134‑1
                                                          gaTGCCGTAAAACCGGCTGTGCCATATACGATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATA                                                                                                        <  2:1428856/132‑1
                                                          GCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGTGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATA                                                                                                        <  1:2291758/134‑1
                                                               CGTAAAACCGGTTGTGCCATATACCATAGACTTTTTATTAGTCATTTCTTGGGGAATAGGAACAATGCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAG                                                                                                   <  1:1776326/134‑1
                                                                GTAGAACCGGGTGTGCCATATGCCATAGTCTGTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGT                                                                                                  <  2:1098587/134‑1
                                                                   AAACCTGCTGTGACATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAAC                                                                                               <  1:2313635/134‑1
                                                                            gttCCAGATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATT                                                                                      <  2:2750803/131‑1
                                                                              GCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCTCTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTAT                                                                                    <  1:1518257/134‑1
                                                                                  TATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCC                                                                                <  1:1857900/134‑1
                                                                                      CCATAGACTCTTTAATAGACATTTCTTGGGGAATAGAAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCT                                                                            <  1:2629776/134‑1
                                                                                        ATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTg                                                                          >  2:1707362/1‑133
                                                                                          AGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCAACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAA                                                                        >  1:276608/1‑134
                                                                                             CTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACT                                                                     >  1:1691613/1‑134
                                                                                                TTTAATAGTCATTTCTTGGGGAATAGGAACAATCCACTTTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTAT                                                                  <  1:2563451/134‑1
                                                                                                     TAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTC                                                             <  1:2687536/134‑1
                                                                                                       GACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGA                                                           >  1:1634830/1‑134
                                                                                                       GACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGA                                                           >  1:319623/1‑134
                                                                                                       GACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGA                                                           <  2:115174/134‑1
                                                                                                         CATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAACTGCACCTGTATGTATCAGCGGCGCACCATAAACAGTAACTAATACATTATCGAATTCTTTAAACTTATCATTCGAAC                                                         >  1:2101311/1‑134
                                                                                                          ATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATTCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACT                                                        <  1:2512086/134‑1
                                                                                                          ATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACT                                                        <  1:2247441/134‑1
                                                                                                          ATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACT                                                        <  1:1182167/134‑1
                                                                                                            TTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGACATCTTTAAACATATCATACGAACTTG                                                      >  1:2349557/1‑134
                                                                                                               TTGGGGAATAGGAACAATCCACTCACCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATT                                                   >  1:2418107/1‑134
                                                                                                                TGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAATAAATAATAAAATATCAAATTCTTTGATCTTAACATACGAACTTGATac                                                  >  1:520080/1‑132
                                                                                                                 GGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCA                                                 <  1:65265/134‑1
                                                                                                                   GGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTATACTCATCCTTCGAAATTGATTCAAt                                               >  2:2114274/1‑133
                                                                                                                   GGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGAAACTAATAAATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAAC                                               >  1:2162676/1‑134
                                                                                                                       TAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATA                                           <  2:899541/134‑1
                                                                                                                        AGGAACAATCCACTCTCCAGGCACTTGTGCCTATTCTGATAATCCACCTGTATATATCACACAAACATAATAACAAATAACTAAAACATTAACGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAC                                          >  1:461/1‑134
                                                                                                                         cGAACAATCCACTCTCCAGTCACTTGTGCATATTCTGATTATTCTTCTTTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACC                                         <  1:10349/133‑1
                                                                                                                         GGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACC                                         <  1:2471401/134‑1
                                                                                                                          GAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTACACTTATCATTCGAACTTGATTCAACAATAACT                                        >  2:860503/1‑134
                                                                                                                          GAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCT                                        <  2:2863108/134‑1
                                                                                                                           cACAATCCACTCGCCAGGCTGCTGTGTATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTATATAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTG                                       <  2:1199193/133‑1
                                                                                                                           agCAATCCACGCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTG                                       <  2:73921/132‑1
                                                                                                                            ACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGC                                      <  2:267552/134‑1
                                                                                                                             CAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCA                                     <  2:1269259/134‑1
                                                                                                                             CAACCCACTTTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGTACTTGATTCAACAATACCTGCA                                     <  2:192241/134‑1
                                                                                                                                TCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTCTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAA                                  >  2:1471132/1‑134
                                                                                                                                  CACTCTCCAGGCACTTGTGCATATTATGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCACAAATAACTCCACAATC                                >  2:1959014/1‑134
                                                                                                                                   ACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCT                               >  2:962812/1‑134
                                                                                                                                   ACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAATAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCT                               >  1:1428310/1‑134
                                                                                                                                    CTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTACTACATTATCGCCTTCTTTAAACTCATCATTCGAACTTGATTCAACAATACCTGCACCATCTA                              >  2:1535056/1‑134
                                                                                                                                    CTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTTAACTTATCATTCGAACTTGATTAAACAATACCTGCAAAATCat                              >  1:1329941/1‑132
                                                                                                                                    CTCTCCAGGCACTTGTGCATATTCGTAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTA                              <  2:2233112/134‑1
                                                                                                                                     TCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTCAACTTATCTTTCCAACGTTATTCAACAATACCTGCAAAATCTAT                             <  1:1981548/134‑1
                                                                                                                                       TCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATAC                           <  2:2039707/134‑1
                                                                                                                                        CCAGGCGCTTGTGCATATTCTGAAAATCCTCCTGTATGTGTCACGCCAACATCATAACCTGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACC                          <  1:1744518/134‑1
                                                                                                                                         CAGGCACTTGTGTATATTCTGAAAATCCACCTGTATGTGTCTTGCGTGCATCATAACCAGTAACTAAGACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCA                         <  1:1232501/134‑1
                                                                                                                                          AGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAG                        <  2:2632205/134‑1
                                                                                                                                           GGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTGAACAATACCTGCAAAATCTATACCAGG                       <  1:2731500/134‑1
                                                                                                                                           GGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGG                       <  2:1326576/134‑1
                                                                                                                                           GGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGG                       >  2:2311148/1‑134
                                                                                                                                            GCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTATACTTATCATTCGAACTTGATTCAACAATAACTGCAAAATCTATACCAGGA                      <  2:767045/134‑1
                                                                                                                                             CACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATAATTCGAACTTAATTCAACAATACCTGCAAAATCTATACCCGGAA                     >  1:375215/1‑134
                                                                                                                                             CACGTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAA                     <  2:2429104/134‑1
                                                                                                                                                TTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCA                  <  1:791228/134‑1
                                                                                                                                                   TGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACAAGGAATCATAG               >  1:1938465/1‑134
                                                                                                                                                    GCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGG              <  1:866416/134‑1
                                                                                                                                                      ATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGTAT            <  2:575822/134‑1
                                                                                                                                                          TCTGACAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAATTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATC        <  1:158341/134‑1
                                                                                                                                                           CTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCT       >  2:1798494/1‑134
                                                                                                                                                           CTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACAATATCGAATTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCT       >  1:746751/1‑134
                                                                                                                                                            TGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTACACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTC      <  2:391365/134‑1
                                                                                                                                                            TGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACAAGGAATCATAGGATAATCTC      >  1:1000000/1‑134
                                                                                                                                                                AATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT  <  2:2816612/134‑1
                                                                                                                                     ||||||||||||||||||||||||||||                                                                                                                                      
AATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000731/6420‑6552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT  >  CP000731/6553‑6685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.