| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP000731 | 6,552 | +TCTCCAGGCACTTGTGCATATTCTGAAA | 100% | intergenic (+1069/‑419) | cadX → / → USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 6552 | 0 (0.000) | 443 (1.210) +TCTCCAGGCACTTGTGCATATTCTGAAA |
126/190 | NT | 100% | intergenic (+1069/‑419) | cadX/USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator |
| ? | CP000731 | 6553 = | 0 (0.000) | intergenic (+1070/‑418) | cadX/USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator | |||||
Only 100 of 638 total aligned reads displayed.
AATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATT > CP000731/6420‑6686 | ccatatttttctagttcaaaaattgataatgctgctgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaa < 1:1563321‑M2/1‑1 (MQ=255)ccatatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgtcatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaa < 1:2433782‑M2/1‑1 (MQ=255)ccatatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaa > 2:1575493‑M2/134‑134 (MQ=255) catatttttctatttcaaaatttgataacgttgtcgtaaaacctgctgtcgcatataccatagactctttaatagacatttctgggggaataggaacaatcctctctccaggcacttgtgcatattctgaaaAt < 2:25584‑M2/2‑1 (MQ=255) catatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaattgacatttcttggggtataggaacaattcactctccaggcaattgtgcatattctgaaaAt > 1:1115930‑M2/133‑134 (MQ=255) catatttttctagttcaaaaattgataataatgcagtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaAt < 2:510131‑M2/2‑1 (MQ=255) atatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATc > 1:480307‑M2/132‑134 (MQ=255) tatttttctagttcaaaaattgataatgctgccgtaaaaccggctgtgacatataccatagactctttaatagacatttcttgggcaataggaacaatccactctccaggcacttgcgcatattctgaaaATcc > 2:1247824‑M2/131‑134 (MQ=255) tgctagttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTg < 2:2233335‑M2/9‑1 (MQ=255) gtctagttcaaaaatggatagtgcggcggtaaaaccggctgggccatatatcatagagtctttaatagacatttcgtggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCGCCTg < 2:1107455‑M2/9‑1 (MQ=255) gttcaaaaattgataatgctgccgtaaaaccgtctgtgccatatactatagactctttaataaacatttattgaggaataggaacaattcactctacatgcacttgtgcatattctgaaaATACACCTGtattt > 1:297478‑M2/121‑132 (MQ=255) gttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTAtgt > 1:2545265‑M2/121‑134 (MQ=255) ttcaaaaattgataatgctgccgtaaaaccggctgtgccatataccattgactcttttatagacatttcggggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTAtgtg < 1:260153‑M2/15‑1 (MQ=255) tcaaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATgtgt > 2:2521085‑M2/119‑134 (MQ=255) ccaaaaattgataatgctgccgtaaaaccggctttgccatataccatagactcttaaatggacatgggttggtgaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATgtgt < 2:334944‑M2/16‑1 (MQ=255) aaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCa < 1:2239109‑M2/18‑1 (MQ=255) aaaaattgataatgctgccgtaaaaccggctgtgccatataccatagactcgttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattccgaaaATCCACCTGTATGTGTCa > 2:2406544‑M2/117‑134 (MQ=255) aattgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCAACCTGTCTGTGTCACGc > 1:2632708‑M2/114‑134 (MQ=255) ttgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCa > 1:2787722‑M2/112‑134 (MQ=255) ttgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatcaactatctaggcacatgtgaataccccaaaaATTCACCTGTATGTGTCACGCCa > 1:1805791‑M2/112‑134 (MQ=255) tgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCaa > 2:2815520‑M2/111‑134 (MQ=255) tgataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggcgaatcggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCaa < 2:2329312‑M2/24‑1 (MQ=255) ataatgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAAca < 1:2219943‑M2/26‑1 (MQ=255) aattctgtcttaaaaccggctgtgtcatataccgtagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtctttattctgaaaATCCACCTGTATGTGTCACGCCAAcatc < 2:2056250‑M2/28‑1 (MQ=255) atgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttgggggataggaacaatccactctccaggcacttgtgcatattttgaaaATCCACCTGTATATGTAAAACCAAcatca > 1:1265539‑M2/106‑134 (MQ=255) atgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAAcatca < 2:1682669‑M2/29‑1 (MQ=255) tgctgccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAAcatcat < 2:963124‑M2/30‑1 (MQ=255) gccgtaaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAAcc > 1:73661‑M2/101‑134 (MQ=255) ccgtaaaaccggctgtgccatatatcatagactctttattagacatttcttggggaataggaacaatccactctccagtcacttgtgcatattctgaaaATCCAGCTGTATGTGTCACGCCAACATCATAACCa < 2:115511‑M2/35‑1 (MQ=255) ccgtaaaaccggctgtgccatataccatagactctttaatagacatttctttgggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCa < 1:1406327‑M2/35‑1 (MQ=255) gtaaaaccggttgttccatataacattttttttttaatatacatttctttgggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGt < 1:1929395‑M2/37‑1 (MQ=255) taaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTa > 2:1208082‑M2/97‑134 (MQ=255) taaaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaagcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAgtt > 1:640920‑M2/97‑133 (MQ=255) aaaaccggctgtgccatataccatagactctttaatagacatttcttgggaaataggaacaatccactctcaaagcacttgtgaatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACAAGTaa > 1:792059‑M2/96‑134 (MQ=255) aaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAAc < 1:1886134‑M2/40‑1 (MQ=255) aaaccggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACAAGTAAc > 2:1140606‑M2/95‑134 (MQ=255) accggctgtgccatataccatagactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTa > 2:649868‑M2/93‑134 (MQ=255) tataccatagactctttaatagacatttcttgggggataggtacaaaccactctgctggttcttctacatatactgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGcc < 1:1087240‑M2/55‑1 (MQ=255) ccagagactcttgaagatgcatttcttgggaaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCcttct < 2:2291240‑M2/59‑1 (MQ=255) agactctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTaa > 2:2448039‑M2/72‑134 (MQ=255) agactctttaatagacatttcttggggaataggaacaatccactctccaggcacttctgcatattctgaaaATCCACCTGTATATATAACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTaa > 1:120075‑M2/72‑134 (MQ=255) ctctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACt > 1:1691613‑M2/69‑134 (MQ=255) ctttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTa > 2:2749545‑M2/67‑134 (MQ=255) ctgtaagaggcatttctgggggaataggaacaatccactctcgaggcacttgtgcatattctgaaaATCCACCTGTATGTGGCACGCCAACATCATAACCAGTAGCTAATACATTATCGCCTTCTTTAAACTTa < 2:577825‑M2/68‑1 (MQ=255) tttaatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTAt > 1:2394346‑M2/66‑134 (MQ=255) aatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATTATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCAt > 1:1959901‑M2/63‑134 (MQ=255) aatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCAt > 2:1932018‑M2/63‑134 (MQ=255) aatagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattatgaaaATCCAACTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCAt > 1:1432721‑M2/63‑134 (MQ=255) atagacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTAACGCCAACATCATAACCAGTAACTAATCCATTATCGCCTTCTTTAAACTTATCAtt > 1:1535890‑M2/62‑134 (MQ=255) agacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCg < 1:1625416‑M2/75‑1 (MQ=255) gacatttcttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATGATCGCCTTCTTTAAACTTATCATTCGa > 1:2006227‑M2/59‑134 (MQ=255) atttcttggggaataggaacaatccactctccaggtacttgtgcatattctgaaaATCCGGCTGTCTATGAAACGCCAAAATACTAACCAGCAATCAATACATTATCGCCTTCTTTAAACTTATCATTCGAACt < 1:2861164‑M2/79‑1 (MQ=255) tttcttggggaataggaacaatcctctctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACtt < 2:2851687‑M2/80‑1 (MQ=255) cttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGAt < 1:2154826‑M2/83‑1 (MQ=255) cttggggaataggaacaatccactctacaggcacttgtacatattctgaaaATCCACCTGTATGTGTCACGCCACCATCATAACCAGTCACTAAAACATCAAAGCCTTCTTTAAACATATCATCCGAACTTAAt > 2:1820221‑M2/52‑134 (MQ=255) ttggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTCTGTGTCACGCCAACATCATAACCAGTAACTAATACATTCTCGCCTTCTTTACACTTATCATTCGAACTTGAtt > 2:861048‑M2/51‑134 (MQ=255) tggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTc > 2:2150839‑M2/50‑134 (MQ=255) tggggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAATAAATAATAAAATATCAAATTCTTTGATCTTAACATACGAACTTgatac > 1:520080‑M2/50‑132 (MQ=255) ggggaataggaaacatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGTCAACATCATAACCAGTAGCTAATACATTATCGCCTTCTTTAAACTTATCATTCGGACTTGATCca < 2:756138‑M2/86‑1 (MQ=255) ggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTcaac < 1:2287712‑M2/88‑1 (MQ=255) ggaataggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTaaac > 1:983363‑M2/47‑134 (MQ=255) aggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCTACATCATAACCAGTAACTAATACATTATCGTCTTCTTTAAACTTATCATTCGAACTTTATTCAACaattc > 2:792754‑M2/42‑132 (MQ=255) aggaacaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTAATTCAACAATAc > 2:1959642‑M2/42‑134 (MQ=255) ggaacaatcccctctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACCTTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAcc < 2:1471049‑M2/94‑1 (MQ=255) ggaacaatccacgctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAcc < 1:1737720‑M2/94‑1 (MQ=255) gaacaatccactctccaggaaattgtggagaggcagaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCAAACTTGATTCAACAATACCt > 2:1753921‑M2/40‑134 (MQ=255) acaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGc < 2:267552‑M2/97‑1 (MQ=255) acaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCACTCGAACTTGATTCAACAATACCTGc < 1:1489232‑M2/97‑1 (MQ=255) acaatccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTATTTAAACTTATCATTCGAACTTTATTCAACAATACCTGc > 1:907491‑M2/38‑134 (MQ=255) caatccactctctatgcatttgtgtattttctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACAAGTAGCTAAGACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCa < 1:1171387‑M2/98‑1 (MQ=255) caatccactctccaggcacttgtgtatattctgaaaATCCACCTGTATGTGTCATGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCa < 1:1844818‑M2/98‑1 (MQ=255) ccactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTACATTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAAt > 1:1768559‑M2/33‑134 (MQ=255) cactctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTAGAACTTAATTCAACAATACCTgaaaaaac > 1:1320323‑M2/32‑132 (MQ=255) actctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAAcatcat < 2:385408‑M2/30‑1 (MQ=255) actctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAcatat > 2:1498830‑M2/31‑132 (MQ=255) actctccaggcacttgtgcatatccggaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCt > 2:1914614‑M2/31‑134 (MQ=255) ctctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCta < 1:34173‑M2/105‑1 (MQ=255) ctcccggcagttgtgcatattctgaaaAGCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCtata < 2:2014441‑M2/107‑1 (MQ=255) ctccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCtata < 1:2329651‑M2/107‑1 (MQ=255) tccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATAc < 1:2295947‑M2/108‑1 (MQ=255) ccaggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAACCTATAcc > 2:1270151‑M2/26‑134 (MQ=255) ccaggcacttgtgcatattatcgaaCGCCACCAGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAAtccataac > 2:903039‑M2/26‑132 (MQ=255) ggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAgg < 1:600459‑M2/112‑1 (MQ=255) ggcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAgg < 2:1326576‑M2/112‑1 (MQ=255) agcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTTAACATTACCTGCAAAATCTATACCAgg < 2:1440024‑M2/112‑1 (MQ=255) gcacttgtgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGa > 1:2508174‑M2/22‑134 (MQ=255) ccacttgtgcatattctgaaaATCCACCTGTATTTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGa < 1:2711926‑M2/113‑1 (MQ=255) tgcatattctgaaaATCCACCTTTATGTGTCACGCCAACATCAAAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAg < 1:2669086‑M2/120‑1 (MQ=255) tgcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATTACTAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACGTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAg < 1:430932‑M2/120‑1 (MQ=255) gcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTTATTCAACAATACCTGCAAAATCTATACCAGGAATCATAgg < 2:1533668‑M2/121‑1 (MQ=255) gcatattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAgg < 1:866416‑M2/121‑1 (MQ=255) atattctgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAACCTCTACACCAGGAATCATAGGAt < 2:1048951‑M2/123‑1 (MQ=255) attctgaaaATCCATCTGTATGTGTTACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATATCTGCAAAATCTATACCAGGAATCATAGGATaa < 2:450523‑M2/125‑1 (MQ=255) tgaaaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACAAGGAATCATAGGATAAtctc > 1:1000000‑M2/6‑134 (MQ=255) aaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTaa < 2:1643650‑M2/132‑1 (MQ=255) aaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAACCATAGAGtactctctca > 2:2614861‑M2/3‑132 (MQ=255) aaATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAAATGCAAAATCTATACCAGGAATCATAGAATAATCTCTaa > 1:2072399‑M2/3‑134 (MQ=255) aATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAt > 1:2743188‑M2/2‑134 (MQ=255) atccacCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAtt < 1:1023230/134‑1 (MQ=255) atccacCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATACAACAAAACATGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAtt > 1:399919/1‑134 (MQ=255) | AATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATT > CP000731/6420‑6686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |