| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP000731 | 6,552 | +TCTCCAGGCACTTGTGCATATTCTGAAA | 100% | intergenic (+1069/‑419) | cadX → / → USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 6552 | 0 (0.000) | 443 (1.210) +TCTCCAGGCACTTGTGCATATTCTGAAA |
126/190 | NT | 100% | intergenic (+1069/‑419) | cadX/USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator |
| ? | CP000731 | 6553 = | 0 (0.000) | intergenic (+1070/‑418) | cadX/USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator | |||||
Only 100 of 610 total aligned reads displayed.
AAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT > CP000731/6419‑6685 | aTTTCAGGTTGTTATTTGCTATTCTTTCCCATTAAATGTAGTTTGAATATTGATAATGCTGCCGTAAAACAGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAatccactc < 2:599469/134‑3 (MQ=255) aTTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCAGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGCATAGCAACAATCCACtc > 2:1682785‑M1/1‑132 (MQ=255) ttgaggtTGTGATTTGATATTGATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctc < 2:910875‑M1/131‑5 (MQ=255) ttgaggtTGTAATTGGATATTTATTCCATATTTTTCTAGTTCAAAAATTAATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGTAATAGGAACAATCCACtctc < 2:2301451‑M1/131‑5 (MQ=255) cAGGTTGTTTTTTTTTATTTATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctcca < 1:1796202‑M1/134‑7 (MQ=255) cAGGTTGTGATTTGATATTCATTCCATTTTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctcca < 1:1565498‑M1/134‑7 (MQ=255) aGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccag > 1:2295426‑M1/1‑127 (MQ=255) aGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCAACtctccag > 1:1545191‑M1/1‑127 (MQ=255) aGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACAGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccag > 1:12957‑M1/1‑127 (MQ=255) aGGTTGTGATTTGATAATCATTCCAGCATTTTCTAGGTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccag > 1:2733439‑M1/1‑127 (MQ=255) gTTCTGATTTAATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACTGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctctaggc < 2:2108296‑M1/134‑10 (MQ=255) gtgATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTACCATATACCATAGACTCATTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcact > 1:2662530‑M1/1‑122 (MQ=255) gATTTTATATTCATTCCATATTTTTCTACTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttg < 2:779593‑M1/134‑15 (MQ=255) tGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgca > 2:1713116‑M1/1‑116 (MQ=255) atatTCATTCCATATTTTTCTATTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATATCATAGATTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcata < 1:758553‑M1/134‑21 (MQ=255) atatTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGTGGAATAGGAACAATCCACtctccaggcacttgtgcata < 2:1373929‑M1/134‑21 (MQ=255) ttcattcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTATTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattc > 1:450523‑M1/1‑111 (MQ=255) tcattcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAAAAATCCAAtctccaggcacttgtgcatattct > 1:1326576‑M1/1‑110 (MQ=255) gccaTGTTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaa < 2:249073‑M1/133‑29 (MQ=255) ccATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGTCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaa < 1:2433782‑M1/134‑30 (MQ=255) atatTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATTGTTTTATGTTCATACATTTCTTGGGGAACAAGAACAATCCACtctccaggcacttgtgcatattctgaaaatc < 1:2113535‑M1/134‑32 (MQ=255) atatTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatc > 1:480307‑M1/1‑103 (MQ=255) atTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatcca < 2:151150‑M1/134‑34 (MQ=255) atTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCCGCTGTGCCATATACCATAGGCTATTTAATACCCATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatcca > 1:957272‑M1/1‑101 (MQ=255) ttttCTAGTTCAAAAATTGATAATGCTGCCGCAAAACCGGCTGTGCCATATACCATAGAAAAATAAAAAAACAAATCTTGGGGAATAGAAACAATCCACtctccaggcacttgtgcatattctgaaaatccacc > 1:798222‑M1/1‑99 (MQ=255) tttCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttatgcatattctgaaaatcaacct > 2:1121976‑M1/1‑98 (MQ=255) tttCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTCTGACATGTACCAAAGAATCATATATATACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtacatattctgaaaatccacct > 2:1305901‑M1/1‑98 (MQ=255) tAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtat > 1:2577056‑M1/1‑94 (MQ=255) tAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtat < 1:1931231‑M1/134‑41 (MQ=255) tCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGTTTTTTTAATTGATATTTCTTTGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgt < 1:110729‑M1/134‑45 (MQ=255) ccaAAAATTGATAATGCTGCCGTAAAACCGGCTTTGCCATATACCATAGACTCTTAAATGGACATGGGTTGGTGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgt < 2:334944‑M1/133‑45 (MQ=255) aaaTTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacg > 2:2679720‑M1/1‑86 (MQ=255) aaTTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATCGACTCTTTAATATACATTTCTTGGGGAATAGGAACAATCCAAtatccagacacttgtgcatattctgaaaatccacctgtatgtgtcacgc > 1:995303‑M1/1‑85 (MQ=255) ttGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatcaacctgtatgtgtcacgcaa > 2:2589141‑M1/1‑83 (MQ=255) tGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATGTCTTGGGGAATAGGAACAATCCACtctccaggcacttgttcatattctgaaaatccacctctatctctcacgccac > 2:275495‑M1/1‑82 (MQ=255) aTAATGCTGCCGGAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaaca < 2:1548188‑M1/134‑55 (MQ=255) tAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctcaaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacat > 1:1894497‑M1/1‑79 (MQ=255) tAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGAGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacat > 1:1478373‑M1/1‑79 (MQ=255) aaTGCTGCCGTAAAACCGGCTGTGCCATATACAATAGACTCTTTAATAAACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctatatgtgtcacgccaacatc > 2:501884‑M1/1‑78 (MQ=255) ctgcCGTAAAATCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctttatgtgtcacgccaacatcataa < 2:1659379‑M1/134‑61 (MQ=255) ccGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTTGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataacca < 1:1406327‑M1/134‑64 (MQ=255) gTAGAACCGGGTGTGCCATATGCCATAGTCTGTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagt < 2:1098587‑M1/134‑66 (MQ=255) aaaaCCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATTCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaa < 1:120434‑M1/134‑68 (MQ=255) ggCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtaacgccaacatcataaccagtaactaata > 1:2632205‑M1/1‑61 (MQ=255) gCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatac > 1:613064‑M1/1‑60 (MQ=255) gCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatac < 1:2874961‑M1/134‑75 (MQ=255) gtgCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGTATATGAACAATCCCCtctcctgccacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacatt < 1:1087838‑M1/134‑78 (MQ=255) gtgCCAGATTCCATAGTCTCTTTAATAGACATTTCTTGTGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacatt < 1:2493516‑M1/134‑78 (MQ=255) ccATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCTTCtttccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatc < 1:2221905‑M1/134‑81 (MQ=255) cATAGACTCTTTAAAAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatcttctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccatctt > 2:2388880‑M1/1‑46 (MQ=255) aTAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttcttt < 1:2792538‑M1/134‑90 (MQ=255) aGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaa > 2:2448039‑M1/1‑43 (MQ=255) aGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaa < 1:2521085‑M1/134‑92 (MQ=255) ctctTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccactaactaataaattatcgccttctttaaact > 2:1981548‑M1/1‑40 (MQ=255) ctTTAATAGACATTTCTTTGGGAATATAAACATCCGACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcactccaacatcataaccagtaactaatacattatcgccttctttaaactta < 2:2026993‑M1/134‑97 (MQ=255) tttAATTGACATTTCTTGGGGAATATTAACAATCCACtctccagttacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttat < 1:2691648‑M1/134‑98 (MQ=255) tttAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttat > 1:2394346‑M1/1‑37 (MQ=255) aaTAGACATTTCTTTGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcat < 2:1440594‑M1/134‑101 (MQ=255) aaTAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttataat > 2:1950572‑M1/1‑34 (MQ=255) aaTAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattatgaaaatccaactgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcat > 1:1432721‑M1/1‑34 (MQ=255) aTAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttattatt > 2:365595‑M1/1‑33 (MQ=255) aTAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcatt > 2:2268884‑M1/1‑33 (MQ=255) tAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattc < 1:1685199‑M1/134‑103 (MQ=255) aGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcg < 2:1243071‑M1/134‑104 (MQ=255) aGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcg < 1:1625416‑M1/134‑104 (MQ=255) gACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcga > 1:319623‑M1/1‑30 (MQ=255) gACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcga < 2:115174‑M1/134‑105 (MQ=255) cATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaac < 2:2646771‑M1/134‑107 (MQ=255) cATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaaa > 2:462636‑M1/1‑28 (MQ=255) cATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcaagccaacatcataaccaataactaatacaatatagccttctttaaacttatcattcgaac > 1:887582‑M1/1‑28 (MQ=255) aTTTCTTGGGGAATAGGAACAATCCACtctccaggtacttgtgcatattctgaaaatccggctgtctatgaaacgccaaaatactaaccagcaatcaatacattatcgccttctttaaacttatcattcgaact < 1:2861164‑M1/134‑108 (MQ=255) aTTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttagcattcgaact < 2:635539‑M1/134‑108 (MQ=255) tCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttga > 1:2285819‑M1/1‑24 (MQ=255) cTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatagccttctttaaactgatcattcaaacttgat > 1:928366‑M1/1‑23 (MQ=255) cTTGGGGAATAGGAACAATCCACtctacaggcacttgtacatattctgaaaatccacctgtatgtgtcacgccaccatcataaccagtcactaaaacatcaaagccttctttaaacatatcatccgaacttaat > 2:1820221‑M1/1‑23 (MQ=255) ttGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtctgtgtcacgccaacatcataaccagtaactaatacattctcgccttctttacacttatcattcgaacttgatt > 2:861048‑M1/1‑22 (MQ=255) ttGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgatt > 1:2059851‑M1/1‑22 (MQ=255) tGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattc > 1:2240270‑M1/1‑21 (MQ=255) tGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccaataaataataaaatatcaaattctttgatcttaacatacgaacttgatac > 1:520080‑M1/1‑21 (MQ=255) ggAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagaaactaataaattatcgccttctttaaacttatcattcgaacttgattcaac > 1:2162676‑M1/1‑18 (MQ=255) aGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgtcaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatac < 1:1002148‑M1/134‑122 (MQ=255) ggAACAATCCACgctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacc < 1:1737720‑M1/134‑123 (MQ=255) cgaACAATCCACtctccagtcacttgtgcatattctgattattcttctttatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacc < 1:10349‑M1/133‑123 (MQ=255) gAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacct > 2:191819‑M1/1‑11 (MQ=255) cacAATCCACtcgccaggctgctgtgtatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtatataatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctg < 2:1199193‑M1/133‑125 (MQ=255) agcaaTCCACgctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctg < 2:73921‑M1/132‑125 (MQ=255) aCAATCCACtctacaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgatctttattcaacaatacctgc < 2:54906‑M1/134‑126 (MQ=255) cAATCCACtctctatgcatttgtgtattttctgaaaatccacctgtatgtgtcacgccaacatcataacaagtagctaagacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgca < 1:1171387‑M1/134‑127 (MQ=255) cAATCCACtctccaggcacttgtgtatattctgaaaatccacctgtatgtgtcatgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgca < 1:1844818‑M1/134‑127 (MQ=255) aaTCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttcttttcactcatcacacgaacgtgattcaacaatacctgcaa < 1:1982096‑M1/134‑128 (MQ=255) tCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgttcggattctcacaaaaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaa < 1:665240‑M1/134‑130 (MQ=255) tCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtctcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaa > 2:1471132‑M1/1‑5 (MQ=255) ccACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaat < 2:2844708‑M1/134‑131 (MQ=255) ccACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaat < 1:2324449‑M1/134‑131 (MQ=255) ccACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgcctacattaaacttatcattcgaacttgattcaacaatacctgcaaaat > 1:1768559‑M1/1‑4 (MQ=255) cACtctcgaggcacttgtgcgtattcggaaaatccagctgtatgtgtcacgccaacatcagaaccagtaactaatacattatcgccttctttaaacttatcgttcgaacttgattcaacaatacctgcaaaatc < 2:2530367‑M1/134‑132 (MQ=255) cACtctccaggcacttgtgcagattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaaccatacctgcaaaatc > 2:1590421‑M1/1‑3 (MQ=255) aCtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcat > 1:385408‑M1/1‑2 (MQ=255) ctctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatcta < 1:1518640‑M1/134‑134 (MQ=255) ctctccaggcacttgtgcatattcgtaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatcta < 2:2233112‑M1/134‑134 (MQ=255) | AAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAAT > CP000731/6419‑6685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |