| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2762148 = | 367 (1.010) | 5 (0.010) | 3/252 | NT | 1.3% | intergenic (‑52/+11) | sirC/cysJ | Precorrin‑2 dehydrogenase/Sulfite reductase [NADPH] flavoprotein alpha‑component |
| ? | USA300TCH1516_ALE | 2762191 = | 380 (1.080) | coding (1849/1881 nt) | cysJ | Sulfite reductase [NADPH] flavoprotein alpha‑component | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 444 total aligned reads displayed.
TGACGACATTTTTATTTGTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGATTGCTGCGCCTTGCTCA > USA300TCH1516_ALE/2762051‑2762330 | tGACGACATTTTTATTTGTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCgttgttgttg > 1:2964930/1‑141 (MQ=255) acgacATTTTTATTTGTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCgttgttgttgtt < 1:1538514/141‑1 (MQ=255) acgacATTTTTATTTGTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCgttgttgttgtt < 1:3339631/141‑1 (MQ=255) acgacATTTTTATTTGTTAAATCTAACCTTAAGTGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCgttgttgttgtt < 1:4135078/141‑1 (MQ=255) cgacATTTTTATTTGTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGttt > 1:2248156/1‑141 (MQ=255) cATTTTTATTTGTTAAATCTATCATTAATGGCATATTCGTGTTCAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTTATAGCGTTGTTGTTGTTTCAt < 2:1491905/141‑1 (MQ=255) tagttGTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCg < 2:3025573/138‑1 (MQ=255) tATTTGTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCg < 2:2242635/141‑1 (MQ=255) tGTTAAATCTATCATTAATGGCATATTCATGTTTAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACAAATCGCTAATAAACATAACATTGATATAGTTGTTATTATTTCATTTGTcaaaat > 2:1323967/1‑136 (MQ=255) tGTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATGTAACACCAATCGCTAATAAACATCATGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCaat < 2:3606898/141‑1 (MQ=255) gTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCaata > 1:1971758/1‑141 (MQ=255) tCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAAct < 1:1083082/141‑1 (MQ=255) ccaTCATTAATGGGGTTTATATTTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAActc < 2:3275381/139‑1 (MQ=255) cTATCATTAATGGCATATGCATGTTGAGCAATATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAActc < 2:1140664/141‑1 (MQ=255) tATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAActct < 2:2392454/141‑1 (MQ=255) cATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAACATCTATAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGct < 1:2088991/141‑1 (MQ=255) aTTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAACTATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATACTAACTcttctt > 1:4062559/1‑141 (MQ=255) tAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGcttat > 1:1806654/1‑139 (MQ=255) ggCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATACCTCTGcttcttctt > 1:3896680/1‑141 (MQ=255) atatTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTtag > 1:3706012/1‑141 (MQ=255) ttCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGATCCTACTCGCGTGCAGGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGaaa > 1:1026240/1‑141 (MQ=255) tCATGTTGAGCAACATCCTTTATATTTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTCACCAACATCACGTTGATAGCGTTCTCCTTGTTTCATTTGTCGCAATAATAATTCCGCTTCTTCTTGTTAAat > 2:2198267/1‑141 (MQ=255) cATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGTGaattt > 2:2967219/1‑138 (MQ=255) ttGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATgcc > 1:697550/1‑139 (MQ=255) gCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTc < 1:4382126/141‑1 (MQ=255) gCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTc > 1:3391605/1‑141 (MQ=255) aaCATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTGTTCTTGAGAAATATGACggtgtt > 1:943592/1‑136 (MQ=255) aaCATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCtt < 1:2322818/141‑1 (MQ=255) ccTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATCTACATCACGTTGATCGCGTTGTTGTTGTTTCATTTGTCGCAATAATCACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTAcc > 2:748010/1‑141 (MQ=255) ccTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATTACGTTCTTTTAcc > 1:56452/1‑141 (MQ=255) cTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCa < 2:2948576/141‑1 (MQ=255) tttATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCCTTTACCaa > 1:3199003/1‑141 (MQ=255) ttATATCTTTTTACATCATTACACCATAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTGGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAAt < 2:6770/141‑1 (MQ=255) tataTCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACATTGATAGCGTTGTTGTTGTTTCATTTTTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTTCCCATa > 2:1875480/1‑141 (MQ=255) agtagaagcagtgttatcattgcgacaaatgcaacTACTCCAATCGCTAATAATCATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATa > 1:3805517‑M1/36‑141 (MQ=255) atatCCTTTTACATCACTACACCTTAATATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATAc < 2:506568/141‑1 (MQ=255) cTTTTTACATCATTACACCGTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCt < 2:1410686/141‑1 (MQ=255) tttttACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCTCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCtt < 2:393617/141‑1 (MQ=255) ttACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTaa < 1:1988888/141‑1 (MQ=255) ttACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTaa > 1:2927481/1‑141 (MQ=255) ttACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTaa < 2:2091868/141‑1 (MQ=255) ttACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTATTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACTAATACATCTTTaa > 2:2776420/1‑141 (MQ=255) ttACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTGGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTaa < 1:312896/141‑1 (MQ=255) aCATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATg > 2:4400332/1‑141 (MQ=255) aCATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATg > 1:2560739/1‑141 (MQ=255) aCATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATAAATCTTTAATg > 1:1289980/1‑141 (MQ=255) catcatTACACCTTAAAATATTTAACACCATTCGCTAATAAACATCACGTTAATAGCGTTGTGGTTGTTTCATTTTTCGCAATAATAAATCTGCTTCTTCGTGAGAAATATTACGTTCTTTTACCAAAACATATTTAAtag > 2:2537699/1‑139 (MQ=255) catTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTCTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATCAATCTTTAATCGCtt > 2:4103824/1‑141 (MQ=255) atTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTg < 2:1716798/141‑1 (MQ=255) cacCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATgg > 2:3882211/1‑141 (MQ=255) tacTTTAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGa < 1:235479/139‑1 (MQ=255) ccTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGAc < 2:1525516/141‑1 (MQ=255) ccTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGAc > 1:3483591/1‑141 (MQ=255) cTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACa > 1:3072238/1‑141 (MQ=255) cTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACa < 1:3285775/141‑1 (MQ=255) ttAAAATATTTAACATCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACAt < 2:2273792/141‑1 (MQ=255) ttAAAATATCTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACAt < 1:851201/141‑1 (MQ=255) aaaaTATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTCCCAATACATCTTTAATGCCTTGATGGACATCt > 1:3828509/1‑141 (MQ=255) aaaTATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCtt < 1:2548091/141‑1 (MQ=255) atatTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTc > 1:1661896/1‑141 (MQ=255) tatTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTGTTGAGAAATATGACGTTCTTTTACCAATGCATCTTTAATGGTTTGGTGGACAACTTTCg > 1:4228039/1‑141 (MQ=255) tatTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCg > 2:2820268/1‑141 (MQ=255) tatTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTAGCAATAATAACTCTGCTTCTTCTTGAGATATATGACGTTATTTTACGAATACATCTTTAATGCATTGATGGACATCTTTCg > 1:377343/1‑141 (MQ=255) atTTAACACCAATCGCTAATAAACATCACGTTGATAGCGATATTATTGTTTCATTTGTCGCAATAATAAATCTGCTTCTTCTTGAAAAATATAACGTTCTTTTACTAATACATCTTTAATGACTTGATGACCATCTTTCGc > 2:3454180/1‑141 (MQ=255) tttAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGATTGATGGACATCTTTCGcc > 2:3208939/1‑141 (MQ=255) ACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTTTCGCAATAATAAATCTGCTTCTTCTTGAGAAATATTACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCCTAc < 1:1233626‑M1/141‑1 (MQ=255) ACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATAc > 1:1761478‑M1/1‑141 (MQ=255) ACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTATTTTACCAATATATCTTTAATGGCTTGATGGACATCTTTCGCCATAc < 2:4357897‑M1/141‑1 (MQ=255) CACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACGAATACGTCTTTAATGGCTTGATGGACATCTTTCGCCATACa < 1:147904‑M1/141‑1 (MQ=255) CACCAATCACTAATAAACATCACGTTGATATCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACa > 2:4173172‑M1/1‑141 (MQ=255) aTCGCTAATAAACAGCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACAttttt < 2:607811/141‑1 (MQ=255) tCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTc > 1:467708/1‑141 (MQ=255) ttcTAATAATCATCACTTTGATAGCGTTTTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCa < 2:1016843/139‑1 (MQ=255) cGCTAATAAACATCACGTTGATAGCGGTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACTAATCCATCTTTAATGGCTTGATGGACATCTTACGCCATACATTTTTCa > 2:70591/1‑141 (MQ=255) ccTAATAATCATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCAt < 1:117512/140‑1 (MQ=255) ccTAATAAACATCACGTTTATAGCGTTTTTGTTTTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTTATGAACATCTTTCGCCATACATTTTTCAt < 2:3814517/140‑1 (MQ=255) cTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATTCATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATc < 2:3762801/141‑1 (MQ=255) taataaACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGCGAAATATGACGGTCTTTTACTAATCCATCTTTAATGGCTTGATGGACAGCTTTCGCCATACATTTTTCATCg > 1:397687/1‑141 (MQ=255) taataaACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACCTTTTTCATCg > 1:3617009/1‑141 (MQ=255) taataaACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCg > 1:2674145/1‑141 (MQ=255) taataaACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATCGACATCTTTCCGCATACAATTTTCATCg > 2:157129/1‑141 (MQ=255) aatatAGATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGc < 2:1958394/141‑1 (MQ=255) ataaACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATCCATCTTTAATGGCTTGAGGGACATCTTTCCCCATACTTTTTTCATccac > 2:817724/1‑138 (MQ=255) ataaACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGcc < 2:3391605/141‑1 (MQ=255) ataaACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGcc > 1:1720942/1‑141 (MQ=255) taaACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCca < 1:830642/141‑1 (MQ=255) aCGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAAtata > 1:744259/1‑141 (MQ=255) cGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAg > 1:3241605/1‑141 (MQ=255) ttGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGAt > 1:3516404/1‑141 (MQ=255) ttGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGAt > 1:216517/1‑141 (MQ=255) ttGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGAt > 2:940417/1‑141 (MQ=255) ttGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATACCCACAACtatattt > 2:2638332/1‑138 (MQ=255) tGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCTACAAAtctacttt > 2:3493976/1‑137 (MQ=255) tcgCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACGAATACATCTTTAATTGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGATtgct < 2:3656054/139‑1 (MQ=255) tAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGATtgct > 2:16350/1‑141 (MQ=255) tAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGATtgct < 1:4107826/141‑1 (MQ=255) gttgttgttgttTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGATTGCTgcgc > 1:2848600/1‑141 (MQ=255) ttGTTTCATTTGGCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGATTGCTGCGCCTTGCTc < 2:1209927‑M2/139‑1 (MQ=255) tGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGATTGCTGCGCCTTGCTCa < 1:2773571‑M2/140‑1 (MQ=255) tGTGTCATTTGTATGAATAATTACTTTGCTTTTTCTTACGAAATATGAAACTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCTCCATACATTTTTCATCGCCACAAATATAGATTGCTGCGCCTTGCTCa < 2:107176‑M2/140‑1 (MQ=255) | TGACGACATTTTTATTTGTTAAATCTATCATTAATGGCATATTCATGTTGAGCAACATCCTTTATATCTTTTTACATCATTACACCTTAAAATATTTAACACCAATCGCTAATAAACATCACGTTGATAGCGTTGTTGTTGTTTCATTTGTCGCAATAATAACTCTGCTTCTTCTTGAGAAATATGACGTTCTTTTACCAATACATCTTTAATGGCTTGATGGACATCTTTCGCCATACATTTTTCATCGCCACAAATATAGATTGCTGCGCCTTGCTCA > USA300TCH1516_ALE/2762051‑2762330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |