| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 450716 | 30 (0.230) | 95 (0.840) | 75/244 | 0.4 | 76.2% | intergenic (+83/‑281) | speC_3/tst_2 | Exotoxin type C/Toxic shock syndrome toxin‑1 |
| ? | USA300TCH1516_ALE | 451778 = | 33 (0.290) | intergenic (+77/‑369) | tst_2/USA300HOU_RS02140 | Toxic shock syndrome toxin‑1/hypothetical protein | |||||
Only 100 of 139 total aligned reads displayed.
AATTACAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/450560‑450716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcttagcttcttttTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAATTGAGG > USA300TCH1516_ALE/451778‑451917 AATTACAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATG < 1:476793/141‑1AATTACAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATG > 1:338706/1‑141AATTACAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATG < 2:890250/141‑1 TACAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTG > 2:944840/1‑141 CAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCT > 4:443731/1‑141 CAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCT > 1:70931/1‑141 CAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCT > 3:222344/1‑141 CAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCT > 3:222525/1‑141 AAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTT > 4:226955/1‑141 AAGAAAATCGCATGGCAGATGTCATAGATGGCACTAAACGTGAAAACAGTGAAGTAAAAATAAAATAATCATGACATTCTCTAAATAGAAGCTGACAACAGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTT < 2:575201/141‑1 AGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTA > 1:857793/1‑141 AGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTA > 2:68658/1‑141 AGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAAGAGGTGCGGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTA < 1:239439/141‑1 AAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGC < 2:847220/141‑1 CGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTT < 1:696258/141‑1 GCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTT < 2:126880/141‑1 CATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTT < 1:727248/141‑1 ATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTT > 4:107390/1‑141 ATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTT < 1:489507/141‑1 ATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTT > 1:515716/1‑141 ATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTT < 1:933194/141‑1 CAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTG < 3:432878/141‑1 CAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCAGGACATGCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTG < 1:306765/141‑1 AGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGT > 2:4828/1‑141 GTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGA > 3:447515/1‑141 TCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAG > 1:747349/1‑141 AGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGAT < 1:580362/141‑1 GATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATG < 2:894796/141‑1 ACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTTGAGAGATGAAAATG > 4:416690/1‑141 AATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAG < 2:483584/141‑1 TTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTA < 1:41841/141‑1 GATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATC > 4:281331/1‑141 AACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGAT < 2:916330/141‑1 AACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGAT > 2:144161/1‑141 ACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATG > 1:529731/1‑141 ACATTGAAGTAAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATG < 4:441985/141‑1 ATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAA < 3:431938/141‑1 TTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAAT < 3:226955/141‑1 GAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAA < 1:744250/141‑1 GAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAA < 1:132712/141‑1 GAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAA < 2:874425/141‑1 ATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACAC < 1:365097/141‑1 TAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACC < 1:51746/141‑1 TAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACC > 1:883264/1‑141 TAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAA < 1:564051/141‑1 AATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTTTTTTGTTGTGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAA > 2:1018212/1‑141 ATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAA > 3:194102/1‑141 TCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGTCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAA < 2:922084/141‑1 TCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAA < 1:1015610/141‑1 CTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATAAAAAATAAAAACACCAATAAAACTTGTGGAAAT < 2:742229/141‑1 CTAAATAGAAGCTGTCATCGGAAAAACATGAAGTTATGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGGGGAAATAG > 2:442571/1‑141 TAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGT < 2:212173/141‑1 ATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGA < 4:25482/141‑1 ATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGA > 2:1025855/1‑141 ATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGA < 2:576884/141‑1 AGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATA > 2:351522/1‑141 AAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACT > 2:594013/1‑141 AAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACT > 2:547826/1‑141 AAGCTGGTATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACT < 2:680662/141‑1 GCTGTCATCGGAAACACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGGATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTA > 3:253817/1‑141 GCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTA > 2:78440/1‑141 CTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTgt > 3:32656/1‑139 GTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAG < 3:107390/141‑1 TCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGT < 1:325822/141‑1 ATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCG < 4:256113/141‑1 GAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCG < 1:1039042/141‑1 AAAACAAGAAGTTAAGTGACAACGGCCAACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGGGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTT < 1:386406/141‑1 AAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTG < 3:399480/141‑1 AAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGT > 1:693368/1‑110 AACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGT > 3:137709/1‑141 ACAAGAAGTTAAGTGACAACGGCCTACCTGTTGCTTAGCTCCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTC > 4:40307/1‑141 AAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCT < 2:747349/141‑1 AAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCT < 1:86233/141‑1 AGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTT > 4:72803/1‑141 AGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTT < 2:169922/141‑1 GAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTTGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTT > 4:80222/1‑141 GAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTT < 4:192268/141‑1 GTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCG < 1:144161/141‑1 AAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGA < 2:647746/141‑1 TGACAACGGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACAT > 1:205816/1‑141 CAACAGCCTACATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAA > 2:301485/1‑141 CATGTTGCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGA < 1:159012/141‑1 GCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACAT < 2:592246/141‑1 GCTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAAAAT > 4:323495/1‑141 CTTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATA > 1:115644/1‑141 TTAGCTTCTTTTTTGTTTTTGATAGATGAACATGAAGCGTATCGATGAATAATAAAAACACTAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGATATGAAACAATGTGGAAAAAATAG > 2:940430/1‑141 TTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATATTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAG > 3:357512/1‑141 TTAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAG < 1:77904/141‑1 tgGCTTCTTTTTTGTGTTGGGGAGATGAAAATGAAGCGTATCGATGAATAATAATGACACTAATAAGCCTTGTGGAAATAGTTGATTCTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAATCATAGT < 2:794837/139‑1 TAGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGT < 1:4828/141‑1 AGCTTCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTT > 4:154296/1‑141 TCTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAAT < 1:2255/141‑1 CTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAATT > 1:688784/1‑141 CTTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTCAAATT > 4:366692/1‑141 TTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAATTG > 4:122667/1‑141 TTTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAATTG > 1:1010250/1‑141 TTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAATTGA > 4:169619/1‑141 TTTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAATTGA > 3:123088/1‑141 TTTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAATTGAG < 1:1021749/141‑1 TTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAATTGAGG > 1:286629/1‑141 AATTACAAGAAAATCGCATGGCAGATGTCATAGATGGCACTAATATTGATAACATTGAAGTGAATATAAAATAATCATGACATTCTCTAAATAGAAGCTGTCATCGGAAAAACAAGAAGTTAAGTGACAACGGCCTACATGTTGCTTAGCTTCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/450560‑450716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgcttagcttcttttTTGTGTTGGAGAGATGAAAATGAAGCGTATCGATGAATAATAAAAACACCAATAAAACTTGTGGAAATAGTTGATACTTATAGTCGCGCGTTGTCCTTTTCGTGACATGAAACAATGTGGAAAACATAGTTAAATTGAGG > USA300TCH1516_ALE/451778‑451917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |