| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 4419 | 10 (1.720) | 14 (0.010) | 7/262 | 0.4 | 0.75% | intergenic (+384/‑81) | USA300HOU_pUSA300HOUMR0006/cadR | hypothetical protein/cadmium binding protein |
| ? | NC_012417 | = 1946 | 3682 (1.040) | intergenic (+179/+147) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 199 total aligned reads displayed.
CATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/4277‑4419‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaataaaTTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGTG < NC_012417/1946‑1808 TTATGCCGATAAAATTTATTGATGTTGAGAAGAACCCTTAACTAACCTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA < 2:115835/140‑1 ATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATCAATTTTCTCGTCATAAATGCGac > 2:724633/1‑138 AGAATCCTTAACTCAACTTGCAGACGAATGACGGCATAGCGTGAGCTATTAAGACGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCCAGGCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATGTT > 2:611194/1‑140 AGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAAAGCGTCGTCTATTTTTTA > 2:281790/1‑140 TAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTC > 1:619779/1‑140 AACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATA > 1:275974/1‑140 AACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTAATTATCTTCATGATA > 1:169480/1‑140 AGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGTATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCA < 2:753842/140‑1 AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTT > 1:450867/1‑140 TAAGCCGAACATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCGATAAA‑GCAATTGGAATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATC < 2:584077/140‑1 cttaagaTCAATAAATTTTCTCGGCATAAATGCGTCTGCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAAT < 2:993370/133‑1 CAACCTCAATAAATTTTCTCCGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAATCAACAAG‑ACCA‑ATAGGAATAA < 2:689498/140‑1 acagCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAA > 2:367438/5‑140 TCAATAACTCTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCGTGATAACCATATTTTCCATCCATCTCGTTAAAAGCATCAGCCTTATATAAAAACGCAAAGTAAGCAACAAC‑ACCA‑CTAGGAATAAAAAAA < 1:751011/140‑1 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGACTAAAAAAA > 2:39872/1‑140 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAA > 1:280174/1‑140 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAA > 1:952545/1‑140 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAA < 1:90134/140‑1 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAA < 1:654439/140‑1 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAAAAC‑ACCA‑ATAGGATTATAAAAA > 2:901538/1‑140 TCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCCCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCACATAGAAAAAAAAAA > 1:191330/1‑140 TCAATAAATTTTCACGACATAAATGGGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTGTTACAAAAACAAAAAGTAAACAACAAC‑AACA‑ATCGGAATAAAAAAA > 2:416377/1‑140 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCT‑ATAGGAATAAAAAAAC < 1:596548/140‑1 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAAC > 1:332131/1‑140 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAAC > 1:242599/1‑140 CAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAAC < 2:932327/140‑1 CAATAAATTTTCTCGGCATAAACGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAAC < 1:1000382/140‑1 aaaAAAGTTTCTCGGCATAAAAGCGTCGTCTATTTGTTATTACCTTCAAGATAATCATATTTTTCTTTCATCTCGTCAAAAGCATCATCTTTAAAAAAAAAAAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA < 2:22970/137‑1 AATAAATTTTCTCGGCATTATTGCCTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA < 2:496256/140‑1 AATAAATTTTCTCGGCATAGATGCGTCGTCTATTTTTTATTATCTTCATGCTAATCATATTTTTCTTCCTTCTCGTCCAAAGCTTCATCTTTAAAAAAAAAAAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA < 2:514632/140‑1 AATAAATTTTCTCGGCATAACTGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA < 1:360500/140‑1 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAACAGTAAGCAAAAAC‑ACCA‑ATAGGAATAAAAAAAaa > 2:683520/1‑138 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAATCAACAAC‑ACCA‑ATAGGAATAAAAAAACA > 2:737514/1‑140 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAAag > 2:423709/1‑138 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAAaa > 1:564800/1‑138 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA > 2:622727/1‑140 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA > 2:469725/1‑140 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA > 2:164528/1‑140 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA < 1:859755/140‑1 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA < 1:88964/140‑1 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGAAATAAAAAAACA > 1:948281/1‑140 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAAGCATAAAAAAAaa > 1:374416/1‑138 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAACAACAAC‑ACCA‑ATAGGAATAAAAAAACA > 2:607996/1‑140 AATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTAAAGAAAAACAAAAAGTAAGCAAAAAA‑ACCA‑ATAGTAATAAAAAAAaa > 2:204868/1‑138 AATAAATTTACTCGGCATAAATGCGTCGTCTATTTTTTATTATCTCCATCATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTAAAAAAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACA < 2:758530/140‑1 cTAAATTTTCTCGGCATAGATGCGTCGTCTCTTCTTGATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAACGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:679505/139‑1 ATAATTTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:929371/140‑1 ATAAATTTTCTCTGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 2:185356/140‑1 ATAAATTTTCTCGGCCTAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:582679/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGTATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGTTATAAAAAAACAG < 2:259410/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATATAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG > 1:499139/1‑140 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAATCGACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:738354/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:468726/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:217555/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 2:156889/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 2:545901/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:1000356/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:957143/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG > 1:52294/1‑140 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGAAACAAT‑ACCA‑ATAAGTATCAAAAAAaaa > 2:666021/1‑137 ATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTCATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATGGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGTATAAAAATACAG < 1:708739/140‑1 ATAAATTTTCTCGGCATAAATGCGTCGACTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAACCACAAC‑ACAA‑AAAGGAATAACAAAACAG > 1:695828/1‑140 ATAAATTTTCCCGGCATAAATGCGTCGTCAATTTTTTATGTTCTGCAGGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:936912/140‑1 ATAAATTTGCTCCGCATAATTGCGTCCTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAG < 1:980191/140‑1 gttATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGAAAAAAAAAAACAGc > 2:322731/4‑139 TAAATTTTCTCGTCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGT < 1:206257/140‑1 TAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATTATATCTTTCTTCCATCTCGTCAAAATAATCATCTTTATAGAAAAACAAAAAATAAGCAACAAC‑ACAA‑ATAAGAAAAAAAAAACAGT > 2:69970/1‑140 TAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAACACCAACAAGTAATCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGT > 1:773935/1‑140 TAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAtt > 1:82287/1‑138 TAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGT < 1:48826/140‑1 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGTTAATGATATTTTTCTTGCATTTCGTCAAAATCATCATCTTTATAGAAAAACAAAAAGTAAACAACAAC‑AGCA‑ATCGTCATCAAAAAACActa > 2:34545/1‑137 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATCTTTTTCTCCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTG < 1:478548/140‑1 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCTATCTCGTCAAAAGCATCATCTTTATAGAAAAACACAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTG > 2:510947/1‑140 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑CTAGGCATAAAAAAACAGTG < 1:552798/140‑1 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATCAAAAAACAGTG > 2:602687/1‑140 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAACCAGTG > 1:267988/1‑140 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTa > 1:395559/1‑139 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTG > 1:540292/1‑140 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAAAAAAAAGTAATCAACAAC‑AACA‑ATAGGAACAAAAAAAAAGTG > 2:375144/1‑140 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTATATAGAAAAACAAAAAGAAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTG > 2:837525/1‑140 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTAGTCAAAATAATCATCTTTATAGAAAAACAAACAGTAAGC‑ACAACAACCA‑CTAGGAAATAAAAAACAatt > 2:689885/1‑137 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATAATCTGCGGAATGATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑CCCA‑ATAGGAATAAAAAAACAGTG > 2:659844/1‑140 AAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTAGTATCTTCATGATAATCATATTTTTCTCCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGTAATAAAAAAACAGTG > 1:41667/1‑140 AATTTTCTCGGCATAAATGCTGCGTCTATTTTTTATTATCTTCATGCTAATCATATGTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGT < 2:655446/140‑1 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTGTAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGT > 2:575986/1‑140 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTCTAAAGAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAAaattag > 2:450609/1‑134 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAATCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGT > 2:212228/1‑140 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAcagt > 2:476732/1‑136 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGT < 1:96130/140‑1 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGT < 2:776323/140‑1 AATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGT < 2:856717/140‑1 AATTTTCTCGGCATAAATGCGTCGTCTATTGTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTAAAAAAAAAAAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGT < 2:87518/140‑1 AATTTTCGCGGCATAAATGAGTCGTTCATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATTTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGT < 2:982363/140‑1 ATTTTCTCGGCATAAATGCGTGGTCTATTTTTTATTAACTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGTG < 1:767050/140‑1 ATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGTG < 1:99735/140‑1 ATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGTG < 1:577552/140‑1 ATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGAGTG < 1:723589/140‑1 ATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑AAAGGAATAAAAAAACAatctg > 2:852865/1‑135 ATTTTCCCGGCATAAATGCGTCGTCTCTTCATTCATTCCTTCATGATAATCATATTTTTCTACCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACACTGTG > 1:142665/1‑140 ATTCTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGTG < 1:663063/140‑1 CATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/4277‑4419‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaataaaTTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC‑ACCA‑ATAGGAATAAAAAAACAGTGTG < NC_012417/1946‑1808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |