| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 4419 | 10 (1.720) | 14 (0.010) | 7/262 | 0.4 | 0.75% | intergenic (+384/‑81) | USA300HOU_pUSA300HOUMR0006/cadR | hypothetical protein/cadmium binding protein |
| ? | NC_012417 | = 1946 | 3682 (1.040) | intergenic (+179/+147) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 255 total aligned reads displayed.
TTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTGCTACAGCAGTTGATTTATT > CP000731/4280‑4558 | ttATGCCGATAAAATTTATTGATGTTGAGAAGAACCCTTAACTAACCTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAA < 2:115835‑M1/140‑1 (MQ=255) atgcatgaaaaaTTTATTGAAGTTGAGAAGAACCCTGAATTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGc < 2:870943/133‑1 (MQ=11) gAAAAAATTTAGTCATGATTAGAGGAACCCGTAACTAAGCTTGTAGATGAATGTCGGCATGGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTg < 2:480769/140‑1 (MQ=11) aaaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGa < 2:809270/140‑1 (MQ=11) aatgTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATa > 2:348504‑M1/5‑140 (MQ=255) aacTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATa > 2:596030‑M1/4‑140 (MQ=255) agTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaa < 2:973345‑M1/138‑1 (MQ=255) TTTATTTATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 2:934303‑M1/1‑140 (MQ=255) TTTATTGATGTTGGTAAGAACCCTTAACGAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCTACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 2:387673‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTATCTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTTCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 2:601616‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCGATTGGAATaaa < 1:87109‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCACTTGGAATaaa > 1:728050‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 1:803872‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 1:397213‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 1:18169‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 2:176767‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 2:929078‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGAGTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 2:458302‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGGTTAGGGCTTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAGTTGTAATaaa < 2:428264‑M1/140‑1 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGAAAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa > 1:211516‑M1/1‑140 (MQ=255) TTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAACCGACCATTCGACAAGGTTTGGGATTGTTATGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 1:576619‑M1/140‑1 (MQ=255) TTTAATGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGAATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATaaa < 2:611251‑M1/140‑1 (MQ=255) TTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGGTTAGGGAGTGTTAAGGGTTCCGAGGCTCACCGTCAATAAAGCAATTGGAataact < 2:553863‑M1/140‑3 (MQ=255) ATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTCAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGaataaaaag < 1:250474‑M1/140‑4 (MQ=255) TTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCCATTGgaataaatggt < 2:892525‑M1/140‑5 (MQ=255) agaaCCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAAttttctcggcataaaagcgtcgtctatttttta > 2:281790‑M1/1‑107 (MQ=255) cTTAACTAAACTTGCAGAAGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAAttttctcgacataaatgcgtcgtctattttttattatct > 1:487488‑M1/1‑101 (MQ=255) aaCTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgata > 1:275974‑M1/1‑93 (MQ=255) aaTGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatattt > 1:450867‑M1/1‑84 (MQ=255) cAACCTCAATAAAttttctccgcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaatcaacaagaccaataggaataa < 2:689498‑M1/140‑128 (MQ=255) acagcaataAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaa > 2:367438‑M1/5‑11 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggactaaaaaaa > 2:39872‑M1/1‑8 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaa > 1:952545‑M1/1‑8 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaa > 2:992396‑M1/1‑8 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaa > 2:84150‑M1/1‑8 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaa > 1:280174‑M1/1‑8 (MQ=255) tCAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaaacaacaacaccaataggaataaaaaaa > 1:769095‑M1/1‑8 (MQ=255) taatAAAttttctcggtataaagtcgtcgtctattttttattatcttcttgttaatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaac < 2:3181‑M1/139‑134 (MQ=255) taatAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaatgtcagcgacaacaccaataggaataaaaaaac < 2:664934‑M1/139‑134 (MQ=255) cAATAAAttttttcgacataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagtaacaacaccaataggaataaaaaaac < 2:622988‑M1/140‑134 (MQ=255) cAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacctataggaataaaaaaac < 1:596548‑M1/140‑134 (MQ=255) cAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaac < 1:334089‑M1/140‑134 (MQ=255) cAATAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaac < 2:146829‑M1/140‑134 (MQ=255) aaTAAAttttctcggcattattgcctcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaaca < 2:496256‑M1/140‑135 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttttttttttttttcaaaagcatcatctttatagaaaaacaaaaagtaagcaaaaacaccaataggaattaaaaaaca > 2:726825‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaacagtaagcaaaaacaccaataggaataaaaaaaaa > 2:683520‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaaca > 2:469725‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaaca > 2:765344‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaaca > 2:164528‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaaca > 1:662209‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagaaataaaaaaaca > 1:948281‑M1/1‑6 (MQ=255) aaTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatcattatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaaca < 2:659412‑M1/140‑135 (MQ=255) aaTAAAtttactcggcataaatgcgtcgtctattttttattatctccatcataatcatatttttcttccatctcgtcaaaagcatcatcttaaaaaaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaaca < 2:758530‑M1/140‑135 (MQ=255) ctaAAttttctcggcatagatgcgtcgtctcttcttgattatcttcatgataatcatatttttcttccatctcgtcaaacgcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 1:679505‑M1/139‑136 (MQ=255) aTAATttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 1:929371‑M1/140‑136 (MQ=255) aTAAAttttctctgcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 2:185356‑M1/140‑136 (MQ=255) aTAAAttttctcggcatagatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaactacaccaataggaataaaaaaacag < 1:640948‑M1/140‑136 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacgaataggaataaaaaaacag < 1:749584‑M1/140‑136 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 1:1000356‑M1/140‑136 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag > 1:158073‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag > 1:300616‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 1:468726‑M1/140‑136 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag > 2:692470‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 1:577561‑M1/140‑136 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 1:882155‑M1/140‑136 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 1:957143‑M1/140‑136 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacag < 1:939484‑M1/140‑136 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaatagaaataaaaaaacag > 1:10570‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacaaataggaataaaaaaacag > 1:365244‑M1/1‑5 (MQ=255) aTAAAttttctcggcataaatgcgtcgactattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaaaccacaacacaaaaaggaataacaaaacag > 1:695828‑M1/1‑5 (MQ=255) aTAAAtttactcggcataaatgcggcgtctagtttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatccgctttatagaaaaacaaaaaggaagcaacaacaccaataggaataaaaaaacag < 1:892367‑M1/140‑136 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataattatatctttcttccatctcgtcaaaataatcatctttatagaaaaacaaaaaataagcaacaacacaaataagaaaaaaaaaacagt > 2:69970‑M1/1‑4 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacatt > 1:82287‑M1/1‑4 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagt > 2:205607‑M1/1‑4 (MQ=255) tAAAttttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaaataagcaacaacacaaataggaataaaaaaacagt > 1:588405‑M1/1‑4 (MQ=255) acatttcctcggaatgaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtacgcaacaccaccaataggaattaaaaagcagtg < 2:90960‑M1/138‑138 (MQ=255) aaattttctcggcatgaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcagctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 2:222206‑M1/140‑138 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatctttatgataatcatatttttcttccatctcgtcaaaagcaacgtctttacagaaaaacaaaaagtcagcaacacaaccaataagaataaaaaaacaaag > 2:530388‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttctatctcgtcaaaagcatcatctttatagaaaaacacaaagtaagcaacaacaccaataggaataaaaaaacagtg > 2:510947‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaaccaaaagtaagcaacaacaccaataggaataaaaaaacagtg > 2:325721‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaacgtaagcaacaccaccaaaaggattaaaaaaacagag > 2:42120‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaccaccaccaataggaatcaaaaaacagag > 2:245796‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacccatcggaataaaaaaacagag > 1:491412‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccactaggcataaaaaaacagtg < 1:552798‑M1/140‑138 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaatcaaaaaacagtg > 2:602687‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg > 1:922525‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 1:984565‑M1/140‑138 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg > 1:193039‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg > 1:540292‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg > 2:610205‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagta > 1:395559‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaaaaacaccaataagaataaaaaaacagta > 2:264560‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcacctttatagcaaaaccaaaagtcagcagcaacaccaatacgaataaaaaaacagtg > 1:23733‑M1/1‑3 (MQ=255) aaattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttctcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtg < 1:755325‑M1/140‑138 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt < 1:723324‑M1/140‑139 (MQ=255) aattttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgt < 2:853916‑M1/140‑139 (MQ=255) aattttatcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacacctataggaataaaaaaacagtgt < 1:516877‑M1/140‑139 (MQ=255) attttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg > 2:744771‑M1/1‑1 (MQ=255) attttctcggcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg < 1:967065‑M1/140‑140 (MQ=255) attttctccgcataaatgcgtcgtctattttttattatcttcatgataatcatatttttcttccatctcgtcaaaagcatcatctttatagaaaaacaaaaagtaagcaacaacaccaataggaataaaaaaacagtgtg < 2:579061‑M1/140‑140 (MQ=255) | TTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAGCACCTATGATTATTTAAAAATATAAGTTATAATACATTCAAAAATATTTTTGAATGAGGTGTATTATGATTCAAACGGTTGTTGCTGCTGCTGTTCTTTATATTGCTACAGCAGTTGATTTATT > CP000731/4280‑4558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |