New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 618066174 (0.910)24 (0.140) 14/170 16.2 13.4% intergenic (+28/‑188) entF/fepE enterobactin synthase multienzyme complex component, ATP‑dependent/regulator of length of O‑antigen component of lipopolysaccharide chains
?NC_000913_3_bme_pgi = 618073 160 (0.960)intergenic (+35/‑181) entF/fepE enterobactin synthase multienzyme complex component, ATP‑dependent/regulator of length of O‑antigen component of lipopolysaccharide chains
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_bme_pgi/617956‑618066
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccataattaTTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATAATA  <  NC_000913_3_bme_pgi/618073‑617975
                                                                                                                                                                                                                  
AGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGTGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAA                                                                                                                <  2:2810934/100‑1
AGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATA                                                                                                                 <  1:2095327/99‑1
AGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATA                                                                                                                 <  2:1809028/99‑1
 GGATTGTGCGCATGTGGATATTATCTCTCCTGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAA                                                                                                               <  1:4441085/100‑1
 GGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAA                                                                                                               >  2:4682536/1‑100
 GGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAA                                                                                                               >  1:2687259/1‑100
   ATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACC                                                                                                             <  2:986892/100‑1
   ATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACC                                                                                                             >  2:4457479/1‑100
   ATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACC                                                                                                             <  2:2670119/100‑1
      GTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCA                                                                                                           >  1:1231545/1‑99
      GTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCA                                                                                                           <  2:1657678/99‑1
       TGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCAT                                                                                                          <  2:3377464/99‑1
       TGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCAT                                                                                                          >  2:3758548/1‑99
        GCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAA                                                                                                        >  2:452586/1‑100
         CGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAAT                                                                                                       >  2:839281/1‑100
         CGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAAT                                                                                                       >  2:1417483/1‑100
         CGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAAT                                                                                                       <  2:1109237/100‑1
         CGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATA                                                                                                         <  1:587683/98‑1
           CATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTA                                                                                                     >  1:192529/1‑100
             TGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTA                                                                                                     >  1:3555695/1‑98
             TGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCAGATTATTCGCGCAACGCTAAACAGGAAAATTAATATTATTTATAAACCCATAATTA                                                                                                     >  1:4374100/1‑98
              GTGGATATTATCTCTCCAGGGACGTTTGAAAAGATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAACTTAATATTATTTATACACCCATAATTA                                                                                                     >  2:3633364/1‑97
              GTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTA                                                                                                     >  2:2315669/1‑97
              GTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTA                                                                                                     >  1:3207093/1‑97
                     TTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTA                                                                                            <  2:1040185/99‑1
                              CAGGGANGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTT                                                                                  <  1:4023143/100‑1
                              CAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTT                                                                                  <  1:1555269/100‑1
                              CAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTT                                                                                  <  1:2944097/100‑1
                              CAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTT                                                                                  <  1:1895009/100‑1
                              CAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTT                                                                                  <  1:3382330/100‑1
                              CAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTT                                                                                  <  1:2616785/100‑1
                              CAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTT                                                                                  <  1:386212/100‑1
                              CAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGT                                                                                   <  2:975792/99‑1
                              CAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGT                                                                                   <  2:947300/99‑1
                              CAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGG                                                                                    <  1:660060/98‑1
                               AGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTT                                                                                 <  2:3367613/100‑1
                               AGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTT                                                                                 <  1:2312753/100‑1
                               AGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTT                                                                                 <  1:247432/100‑1
                                GGGGCGTTTGAAAAAAGTGAGCCGATAATTCGCGCAACGCTAAACAGGTATATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTA                                                                                <  1:2282156/100‑1
                                GGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTA                                                                                <  1:2841346/100‑1
                                 GGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTAT                                                                               <  1:3756865/100‑1
                                  GACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATA                                                                              <  1:2125918/100‑1
                                    CGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAA                                                                             <  2:1453151/99‑1
                                    CGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAAGTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAA                                                                            <  2:4396165/100‑1
                                      TTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTGAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAAT                                                                           <  2:4613715/99‑1
                                           AAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATT                                                                     <  1:678257/100‑1
                                                   GGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACC                                                             <  1:1017187/100‑1
                                                     CCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAATCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTG                                                           <  2:4404322/100‑1
                                                                                                  AAACCCAGAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCT              <  2:4134062/100‑1
                                                                                                   AACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTG             >  1:891796/1‑100
                                                                                                   AACCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTC                 >  2:2504588/1‑96
                                                                                                     CCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGACTAATCGTCCAAATTTTTTCAAACGTCCCTG             >  2:1279729/1‑98
                                                                                                     CCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGA           <  2:4562003/100‑1
                                                                                                     CCCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTG             >  2:1577436/1‑98
                                                                                                      CCATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAG          <  2:3179676/100‑1
                                                                                                       CATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGA         <  1:497927/100‑1
                                                                                                       CATAATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGA           >  2:1080055/1‑98
                                                                                                           ATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATA     <  2:3492264/100‑1
                                                                                                           ATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATA     <  2:2683576/100‑1
                                                                                                           ATTATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGAT      >  2:1227850/1‑99
                                                                                                              ATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATAATA  >  2:1112870/1‑100
                                                                                                              ATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATAAT   <  1:2009756/99‑1
                                                                                                              ATTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATAA    <  2:4134354/98‑1
                                                                                                                                                                                                                  
AGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAAATTAATATTATTTATAAACCCATAATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_bme_pgi/617956‑618066
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacccataattaTTTTCTGTAATTATGGGTTTATAAATAATATTAATTTACCTGTTTAGCGTTGCGCGAATAATCGGCCCAATTTTTTCAAACGTCCCTGGAGAGATAATA  <  NC_000913_3_bme_pgi/618073‑617975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.