New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_KO_pgi	1086010 =	68 (1.340)	6 (0.130)	6/268	6.1	8.2%	coding (1019/1065 nt)	phoH	ATP‑binding protein; putative PhoH family P‑loop ATPase
	?	NC_000913_3_KO_pgi	1086040 =	71 (1.490)					coding (1049/1065 nt)	phoH	ATP‑binding protein; putative PhoH family P‑loop ATPase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTCGGGGAGAACGTGACGGTTATCGTCAACGGTGATATCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGAAACAACCATTTTTATTTGCCCCTGGC  >  NC_000913_3_KO_pgi/1085865‑1086158                                                                                                                                                   |                                                                                                                                                     ctgggggACACCGTGACGGGTATCGTCAACGGTGATATAACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTTGAAGAAGATGAAACGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGCCTGCGt                                                                                                                                                   <  2:293715/146‑1 (MQ=255)    ggggAGAACGTGACGGTTATCGTCAACGGTGATATCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACg                                                                                                                                                >  1:8198/1‑149 (MQ=255)    ggggAGAACGTGACGGTTATCGTCAACGGTGATATCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTAGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGAGTACg                                                                                                                                                >  2:793726/1‑149 (MQ=255)         ggaCGTGACGGTTAGCGTCAACGGGTATATCACGTATTGCGATTTTCCTCGGGGCGTGTCCTTCAGACTGCGGGGCGCGCAGCAACGTGTCGAAGAAGATGCAATGGTGTGTATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCgg                                                                                                                                           <  2:324/147‑1 (MQ=255)          aaCGTGACGGTTATCCTCAACTATGATATCACGCAATGCGATTTGCCTCGCGGCGTGTTCTCCGGATTAAGTGACGCGCTGAAACGTTTCGAAGAAGATGAAAGGGTTGGGATCGTCCGGC‑TCGCTAACGAGGACTGCGTACGTTCGGc                                                                                                                                          >  2:107728/1‑149 (MQ=255)                     tATCGTCAACGGTAATATCACGCCCTGTGTTTGGCCTTGCGACGTTATGGGTGTTTTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAAc                                                                                                                               <  1:658700/149‑1 (MQ=255)                      gtCGTCAACCGTGATATCACCCAATGCGATTTGCCTCGCGGCGTGGGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACg                                                                                                                              <  1:80520/148‑1 (MQ=255)                           cAACGGTGATATCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGc                                                                                                                         >  2:652877/1‑149 (MQ=255)                               ggTGATATCACGCAATGCGATTTGCCTCGCGGGGTGTGCTCTGGATTAAGGTGCTCGCTGGAACTTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGTGGACTGCGTACTTTCGGCTCTTTGCCAACGTACGCTgta                                                                                                                     <  2:109925/149‑3 (MQ=255)                                gTGATATCACGCACTGCGCTGTGCCTTGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGCAGCCCTTTGGACCATCAGCTGGCAGT‑ATTTGGACTGCGTACGTTCCGCACTTTGCCAACGTACGCTGCAt                                                                                                                    <  1:666168/149‑1 (MQ=255)                                     atCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCCCTTAGCCCGCGTACGCTGCATGCCTa                                                                                                               >  2:224166/1‑149 (MQ=255)                                     atCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTa                                                                                                               >  1:243440/1‑149 (MQ=255)                                      tCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGGCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTAc                                                                                                              >  1:243589/1‑149 (MQ=255)                                       cACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGCTCGTCCGGT‑TCGGTAAAGAGGACTGCGTAGGTTAGGCACTTTGCCAACGGTCGCTGCGTGCCTACa                                                                                                             >  2:127150/1‑149 (MQ=255)                                        aCGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCCACGTACGCTGCATGCCTACAg                                                                                                            >  2:885871/1‑149 (MQ=255)                                         cGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGCTTCAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCGGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGt                                                                                                           >  2:418134/1‑149 (MQ=255)                                         cGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGAAACCGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGt                                                                                                           >  2:418123/1‑149 (MQ=255)                                            aaTGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTaa                                                                                                        >  1:249592/1‑149 (MQ=255)                                                      gCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATc                                                                                              >  2:80002/1‑149 (MQ=255)                                                       ccTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCg                                                                                             <  2:601887/149‑1 (MQ=255)                                                        cTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTTCCAACGTACGCTGCATGCCTACAGTTAAGTGTATTATCgg                                                                                            >  2:863356/1‑149 (MQ=255)                                                         tCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGt                                                                                           >  2:67976/1‑149 (MQ=255)                                                                   tgCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCg                                                                                 >  2:677860/1‑149 (MQ=255)                                                                    gCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCgg                                                                                >  1:581459/1‑149 (MQ=255)                                                                     cTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCggg                                                                               <  1:168742/149‑1 (MQ=255)                                                                     cTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGACGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCggg                                                                               >  1:793008/1‑149 (MQ=255)                                                                      tCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGTCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGc                                                                              >  2:512643/1‑149 (MQ=255)                                                                      tCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGc                                                                              >  1:49940/1‑149 (MQ=255)                                                                       ccGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCg                                                                             >  1:480023/1‑149 (MQ=255)                                                                                 tGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGGCCTGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGAGCGAAACgggagt                                                                   >  1:714785/1‑146 (MQ=255)                                                                                  gACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCttt                                                                  <  1:677860/149‑1 (MQ=255)                                                                                   aCGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTACGTGTGTTATCGGTGCAGAGCCCGGGCGCACCGTGCGTTg                                                                 >  2:831657/1‑149 (MQ=255)                                                                                    cgcgCTGGAACGTCTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGt                                                                <  1:604825/149‑1 (MQ=255)                                                                                      cgcTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGttt                                                              <  1:80002/149‑1 (MQ=255)                                                                                       gcTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGtttt                                                             <  1:224166/149‑1 (MQ=255)                                                                                              cGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGtt                                                      <  1:289135/149‑1 (MQ=255)                                                                                                 ttCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTTGGTGTTTAt                                                   >  1:105405/1‑149 (MQ=255)                                                                                                      agaagaTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCg                                              <  1:513546/149‑1 (MQ=255)                                                                                                      agaagaTGAAACGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCg                                              <  2:552331/149‑1 (MQ=255)                                                                                                       gaagaTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGt                                                                                           <  2:418076/103‑1 (MQ=255)                                                                                                       gaagaTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGt                                                                                           >  1:418076/1‑103 (MQ=255)                                                                                                       gaagaTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCgg                                             >  1:469799/1‑149 (MQ=255)                                                                                                        aagaTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGACGAGCCCCGGGGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGa                                            >  1:390893/1‑149 (MQ=255)                                                                                                         agaTGAAATGGTTGGGATCGTCCGGT‑TCGGTACAGAGGACTGCGTACGGTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTACGTGGCTTATCGGTGCAGAGCCCGGGCGAACCGGGCTCGGTTTTGGGGGTTTATGCCCGGAc                                           >  2:457609/1‑149 (MQ=255)                                                                                                          gaTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCg                                              <  2:124343/145‑1 (MQ=255)                                                                                                          gaTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCg                                              >  1:124343/1‑145 (MQ=255)                                                                                                          gaTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACt                                          >  2:810705/1‑149 (MQ=255)                                                                                                           cggAAAGGGGTGGGATGGTCCGGT‑TCGGCAAACAACGCTGCTGGTGGCGGTCAGTTTTCCAACGTACGCTGCATGCCTACAGTTGAGTGTGTTAGCGGTGCAGGGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTa                                         <  2:868063/147‑1 (MQ=255)                                                                                                           aTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTa                                         <  1:810705/149‑1 (MQ=255)                                                                                                           aTGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTATTTTGGGTGTTTATGCCCGGACTa                                         <  1:785109/149‑1 (MQ=255)                                                                                                             gAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAgc                                       <  1:652877/149‑1 (MQ=255)                                                                                                                aTGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAgtgt                                                                                                    <  2:700364/85‑1 (MQ=255)                                                                                                                aTGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAgtgt                                                                                                    >  1:700364/1‑85 (MQ=255)                                                                                                                    ttGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCttttt                                >  2:599150/1‑149 (MQ=255)                                                                                                                        gATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTgg                            >  2:537651/1‑148 (MQ=255)                                                                                                                        gATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGa                            >  2:241084/1‑149 (MQ=255)                                                                                                                           cGTCCGGT‑GCGGGAAAGAGGACTGCGGACGTTCGGCACTTTGCCAACGTAAGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGAaac                         <  1:107728/149‑1 (MQ=255)                                                                                                                             tCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGAaacaa                       <  1:599150/149‑1 (MQ=255)                                                                                                                                 gT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATg                                                  <  2:610257/118‑1 (MQ=255)                                                                                                                                 gT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATg                                                  >  1:610257/1‑118 (MQ=255)                                                                                                                                 gT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGAAACAACCAt                   <  2:560639/149‑1 (MQ=255)                                                                                                                                  t‑tCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGCTAAGGGTGGTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTGTGCCCGGGCTGGCGCTTGTTCTGAAACAACCAta                  >  1:302875/1‑148 (MQ=255)                                                                                                                                     cGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTCAAGTGTGTTATCGGTGCAGAGCCCGGGCTAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGAAACAACCAtttt                <  2:788653/149‑1 (MQ=255)                                                                                                                                       gTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCg                                                                        <  2:458921/91‑1 (MQ=255)                                                                                                                                       gTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCg                                                                        >  1:458921/1‑91 (MQ=255)                                                                                                                                        tAAAGAGGACTGCGTACGTTCGGCACTTGGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCATAGCCCGGGCGAACCGGGCTTGGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGAACCAACCATTTTTAt             <  2:422698/149‑1 (MQ=255)                                                                                                                                            gagGTCTGCGTACGTTCGGCTCTTTGCCAACGTTCGCTGCAGGTCTACAGTTAAGTGTGTTATCGGTGCAGAGCTCGGGCGAACCGGGTTTTGTTTTGGGTGTTTTTGCCCGGACTTGCGCTTTTTCTGAAACAACCATTTTTACTTGc         <  2:899044/149‑1 (MQ=255)                                                                                                                                               gACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGAAACAACCATTTTTCTTTGcccc      >  2:455353/1‑149 (MQ=255)                                                                                                                                                   gCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGAAACAACCATTTTTATTTGCCCctggc  >  1:25178/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                     CTCGGGGAGAACGTGACGGTTATCGTCAACGGTGATATCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGT‑TCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAAGTGTGTTATCGGTGCAGAGCCCGGGCGAACCGGGCTTTGTTTTGGGTGTTTATGCCCGGACTAGCGCTTTTTCTGAAACAACCATTTTTATTTGCCCCTGGC  >  NC_000913_3_KO_pgi/1085865‑1086158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.