| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | = 3548549 | 38 (0.770) | 9 (0.220) +TTTTTTTTTAATGATACGGCGAC |
8/236 | 4.2 | 22.5% | coding (1522/2085 nt) | malQ | 4‑alpha‑glucanotransferase (amylomaltase) |
| ? | NC_000913_3_hsa_tpiA | 3548573 = | 36 (0.730) | coding (1498/2085 nt) | malQ | 4‑alpha‑glucanotransferase (amylomaltase) | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_tpiA/3548439‑3548549‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGA > NC_000913_3_hsa_tpiA/3548573‑3548652 ||||||||||||||||||||||| cgtAACCGCCATCGACTGCTGCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCTAAATAGAGCATTTTGTAAGAGTACACTCCGCTGCTGCTCAGCTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACAC < 2:129183/146‑1CGCAACCGCCATCGACTGTTCCGGATTCGCTTTCGGTTCACGGAACTGCTTCTCGTGGTCGTTGTCGAAATAGAGCATTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACAC < 2:745317/149‑1 ttctATCGACTGCTGCGGTTACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCTCTTTTTAAGAGTACACACCGCTGCTGCGCAGCTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACCAATCA < 2:386356/145‑1 CATCGAGTGTGCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACTCCCCGCTGCTGCGCAGCTTTTTTTTTTTCTCGACCCGGCGGCTACCGAGATCTACACCAATCACCA < 2:434535/149‑1 TTCGGTGCAGGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTTTTTTTTTTTCATGATACGGCGGCCACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTC < 2:825658/149‑1 GAACGTCTTCTCTTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACTGCTGCTGCGCAGCTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAA < 2:174396/149‑1 TCTTCGCGTGTGCGTTTTCGAGATAGAGCATTTTGTAAGAGTACACACCGCTGCTGCGCAGTTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAG < 2:852402/149‑1 TTCTCGTGCTCCTTCTCGAAATAGAGAACTTTCTAAGAGTACACACCCCTGCTTCGCAGCTTTTTTTTTTTAATGATACGGCGACCACCGAGATCTACACCAATCACCATAAAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAG < 2:279329/149‑1 CGAAATCGGGCATTTTTTGAGAGTAGAGACGGCTCCTGGGCAGCTTTTTTTTTTTAATGATCGGGCGACCACCGAGATCTACACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGA < 2:341055/149‑1 ||||||||||||||||||||||| CGCAACCGCCATCGACTGCTCCGGATACGCTTTCGGTGCACGGAACGTCTTCTCGTGGTCGTTTTCGAAATAGAGCACTTTGTAAGAGTACACACCGCTGCTGCGCAGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_tpiA/3548439‑3548549‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACCGAGATCTTCACCAATCACCATACAGCGATGACGTTTACTTTCGAGTGCCAGAATCGAGAGCAGATCATCCACCGGA > NC_000913_3_hsa_tpiA/3548573‑3548652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |