| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | = 3159421 | 18 (0.730) | 4 (0.170) | 4/272 | 2.8 | 17.7% | coding (1726/2220 nt) | ygiQ | Radical SAM superfamily protein |
| ? | NC_000913_3_hsa_tpiA | = 3159442 | 20 (0.850) | coding (1705/2220 nt) | ygiQ | Radical SAM superfamily protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGTTTTTCCCGGTGTAATACATGGTGGTTGAGTTCGCCAGCGGCGACGGATAGAAGTTCTGCACCTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCATGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTT > NC_000913_3_hsa_tpiA/3159298‑3159586 | ggTTTTTCCCGGTGTAATACATGGTGGTTGAGTTGGCCAGCGGCGACGGATAGAAGTGCTGCACCTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAgatg > 1:376411‑M2/1‑145 (MQ=255) ttttCCCGGTGTAATACATGGTGGTTGAGTTCGCCAGCGGCGACGGATAGAAGTTCTGCACCTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAgatgaga < 1:143400‑M2/149‑8 (MQ=255) ccGGTGTAATACATGGTGGTTGAGTTCGCCAGCGGCGACGGATAGAAGTTCTGCACCTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAggg < 1:242122/149‑1 (MQ=255) ccGGTGTAATACATGGTGGTTGAGTTCGCCAGCGGCGACGGATAGAAGTTCTGCACCTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAggg < 2:46454/149‑1 (MQ=255) gctGAGGTCGGCAGCGGCGACGTATCGAAGTGCTGCCCCTGGGCGAGGCGGAAGCGGTGCTTTTTCAGCCATAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCttt < 2:189360/147‑1 (MQ=255) cGCCAGCGGCGACGGATAGAAGTTCTGCACCTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAAATACTGCTCTTTAcctgcct > 1:246116/1‑149 (MQ=255) cggcgACGGATAGAAGTTCTGCACCTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTg < 1:411974/149‑1 (MQ=255) ggATAGAAGTTCTGCACCTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGagtaagt > 1:368379/1‑149 (MQ=255) cTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCAAACAGCTCTTTaa > 2:81687/1‑149 (MQ=255) tGGTCGAGGCGGCAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTaaa < 1:285981/149‑1 (MQ=255) gAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGt > 1:289035/1‑149 (MQ=255) ggAAGCTGTGCTTTTACAGCCACAGGGCCAGAGCCACCACATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGTGATCAGATACTGTTCTTTACTTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAg < 2:193157/149‑1 (MQ=255) gTGCTTTTTCAGCCACAGCGCCAGATTCACCTTATCTTCATCACGCGTACCGGGGTGCGCGGAGCTGAAATCGGGGATCAGATACTGCTTTTTACCGGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCa > 1:16954/1‑149 (MQ=255) tGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCAt > 2:207112/1‑149 (MQ=255) cTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAAAAGCTCTTTAAAGCGGTCATGGCTGCCCATGc > 1:154995/1‑149 (MQ=255) aGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCATGCCCGGCtt > 1:231676/1‑149 (MQ=255) tccAGACTCACCATATCTTCATCACGCGTACCGGGGTGCGCTGAGATGAAATACGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTTCCCATGCCCGGCTTCATCATCtt < 1:398701/148‑1 (MQ=255) atatCTTCATCACGCGTACCGGGGTGCGCGGAgatgaagatatggtgaatctggcgctgtggctgaaaaagcaccgcttccgcctcgaccaggtgcagaacttctatccgtcgccgctggcgaact < 2:148038‑M2/126‑95 (MQ=255) atatCTTCATCACGCGTACCGGGGTGCGCGGAgatgaagatatggtgaatctggcgctgtggctgaaaaagcaccgcttccgcctcgaccaggtgcagaacttctatccgtcgccgctggcgaact > 1:148038‑M2/1‑32 (MQ=255) ttCATCGCGCGTACCGGGGTGCGCGGAGATGAAATAGGGTATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTCAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCATGTCCGGCTTCATCATCTTCGATAACGGCCcttctt < 1:61072/149‑1 (MQ=255) tcaCGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCATGCCCGGCTTCATCCTCTTCGATAACCGCCCTTCATCGGt > 1:97190/1‑149 (MQ=255) aCGCGTACCGGGGTGCGCGTatgaagatatggtgaatctggcgctgtggctgaaaaagcaccgcttccgcctcgaccaggtgcagaacttctatccgtcgccgctggcgaac < 2:294117‑M2/113‑93 (MQ=255) aCGCGTACCGGGGTGCGCGTatgaagatatggtgaatctggcgctgtggctgaaaaagcaccgcttccgcctcgaccaggtgcagaacttctatccgtcgccgctggcgaac > 1:294117‑M2/1‑21 (MQ=255) cGGGGTGCGGGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCATGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCggg < 2:16954/149‑1 (MQ=255) gcgGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCATGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCtt < 2:143400/149‑1 (MQ=255) gcgGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCATGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCtt > 1:306597/1‑149 (MQ=255) | GGTTTTTCCCGGTGTAATACATGGTGGTTGAGTTCGCCAGCGGCGACGGATAGAAGTTCTGCACCTGGTCGAGGCGGAAGCGGTGCTTTTTCAGCCACAGCGCCAGATTCACCATATCTTCATCACGCGTACCGGGGTGCGCGGAGATGAAATAGGGGATCAGATACTGCTCTTTACCTGCCTGTTTTGAGTAAGTATCGAACAGCTCTTTAAAGCGGTCATAGCTGCCCATGCCCGGCTTCATCATCTTCGATAACGGCCCTTCTTCGGTATGTTCCGGGGCAATCTT > NC_000913_3_hsa_tpiA/3159298‑3159586 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |