New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 3895222 =37 (0.880)6 (0.160) 6/258 4.4 13.8% intergenic (+4/+50) chrR/adeP chromate reductase, Class I, flavoprotein/adenine permease, high affinity; adenine:H+ symporter
?NC_000913_3_hsa_tpiA 3895257 = 41 (1.070)intergenic (+39/+15) chrR/adeP chromate reductase, Class I, flavoprotein/adenine permease, high affinity; adenine:H+ symporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACTGCGTGATGAAAATCGGTACCGGACGTCTGCGTGATCTAAGCCCGTGCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/3895378‑3895222
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggtttttAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGA  >  NC_000913_3_hsa_tpiA/3895257‑3895399
                                                                                                                                                                                                                                                                                                            
ACTGCGTGCTGAAAATCGGTACCGGACGTCTGCGTGATCTAAGCCCGTGCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGC                                                                                                                                                         <  1:214768/149‑1
ACTGCGTGATGAAAATCGGTACCGGACGTCTGCGTGATCTAAGCCCGTGCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGC                                                                                                                                                         <  2:141009/149‑1
  TGCGTGATGAAAATCGGTACCGGACGTCTGCGTGATCTAAGCCCGTGCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGG                                                                                                                                                       <  1:433354/149‑1
      TGATGGAAATCGGTACCGGACGTCTGCGTGATCTAAGCCCGTGCGTAATCATCGTTGCGCTGCTGTTTATCCTGAGGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTT                                                                                                                                                   <  2:506208/149‑1
      TGATGAAAATCGGTACCGGACATCTGCGTGATCTAAGCCCGTGCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAACACCAGCCATGCATGATTGCTGCCGGGTTT                                                                                                                                                   >  2:484887/1‑149
       gagtAAAATCGGGACCGGACGTCTGCGTGACCTAAGCCCGTGCGTAAGCATCGTTGTGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTT                                                                                                                                                  <  2:34669/145‑1
                                                                                                                       GTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCA                                                     <  1:64894/130‑1
                                                                                                                       GTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCA                                                     >  2:64894/1‑130
                                                                                                                             AACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATC                                                          >  1:295077/1‑119
                                                                                                                             AACCCGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATC                                                          <  2:295077/119‑1
                                                                                                                                CCGCCATGCATGATTGCTGGCGGGGTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAGGACAATCTTCGGGATAAACAGCAGCGCACCGATGATTACGCACGGGCTTAGATCACGCAGCGGTTCGGTACCGATTGTCATCAtgga                         >  1:285911/1‑145
                                                                                                                                 CGCCATGCATGATTGCTGGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCCTAGATCACGCAGCCGTCCGGTACCGATTTTCATCACGCcg                        >  2:684688/1‑147
                                                                                                                                                  GGCGGGTTTTTAACGCGCTATCGATTTTAGTGAGGGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGTCGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAG       >  2:586664/1‑149
                                                                                                                                                       GTTTTTAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGA  >  1:362064/1‑149
                                                                                                                                                                                                                                                                                                            
ACTGCGTGATGAAAATCGGTACCGGACGTCTGCGTGATCTAAGCCCGTGCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAAAATCGATAGCGCGTTAAAAACCCGCCATGCATGATTGCTGGCGGGTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_hsa_tpiA/3895378‑3895222
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggtttttAACGCGCTATCGATTTTAGTGAGCGTCGATAAAGACAATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGA  >  NC_000913_3_hsa_tpiA/3895257‑3895399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.