New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 4124692	39 (1.070)	3 (0.080)	3/276	NT	7.1%	coding (2101/2199 nt)	priA	Primosome factor n' (replication factor Y)
	?	NC_000913_3_hsa_tpiA	= 4124710	39 (1.070)					coding (2083/2199 nt)	priA	Primosome factor n' (replication factor Y)

TCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/4124572‑4124692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCCTTCCCGCGTGCGCTTGCAACACAT  <  NC_000913_3_hsa_tpiA/4124710‑4124682                                                                                                                                                        TCCGCCGCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACTTCCAGCACCCATGTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAGCACCCTTCCCGCGTGCGCTTGCAACACA   <  2:396626/149‑1                                                       ATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAACACCCTTCCCGCGTGCGCTTGCAACACAT  >  1:169475/1‑96                                                       ATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAACACCCTTCCCGCGTGCGCTTGCAACACAT  <  2:169475/96‑1                                                                                                                                                        TCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/4124572‑4124692 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCCTTCCCGCGTGCGCTTGCAACACAT  <  NC_000913_3_hsa_tpiA/4124710‑4124682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.