New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 1263650 =62 (1.060)40 (0.700) 36/258 0.9 40.1% intergenic (‑150/‑64) lolB/hemA lipoprotein localization factor/glutamyl tRNA reductase
?NC_000913_3_pae_tpiA = 1263818 59 (1.030)coding (105/1257 nt) hemA glutamyl tRNA reductase

Only 100 of 103 total aligned reads displayed.

GCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGATCT  >  NC_000913_3_pae_tpiA/1263673‑1263964
                                                                                                                                                 |                                                                                                                                                  
gCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCTCCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGctta                                                                                                                                                >  1:412125‑M2/1‑146 (MQ=255)
gCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTg                                                                                                                                                >  3:232944/1‑150 (MQ=255)
 cAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttac                                                                                                                                               >  1:537053‑M2/1‑145 (MQ=255)
   gACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgc                                                                                                                                             <  2:216816‑M2/150‑8 (MQ=255)
     cTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAg                                                                                                                                           >  2:367104/1‑150 (MQ=255)
      tAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGc                                                                                                                                          >  1:169864/1‑150 (MQ=255)
      tAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCATATTAGCACTCGGTATCCACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGCATCGTTTTCGCCGGATAAGCTCGATCATGCGCTTGACAGCCTGcattcgcatc                                                                                                                                          <  3:335413‑M2/150‑11 (MQ=255)
       aaCCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTCTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcc                                                                                                                                         <  4:57801‑M2/150‑12 (MQ=255)
        aCCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcct                                                                                                                                        >  4:33322‑M2/1‑138 (MQ=255)
        aCCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcct                                                                                                                                        >  3:139339‑M2/1‑138 (MQ=255)
         cccTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGa                                                                                                                                       >  2:621431/1‑150 (MQ=255)
           ctctCAACGTTGGTATTATTTCCCGCGGACATGACCCTTTTTGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATg                                                                                                                                     <  2:218645/147‑1 (MQ=255)
            tATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATgg                                                                                                                                    >  2:181871/1‑150 (MQ=255)
                aaCGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatg                                                                                                                                >  1:216816‑M2/1‑130 (MQ=255)
                         attattTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCgt                                                                                                                       >  1:38958/1‑150 (MQ=255)
                          ttattTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagact                                                                                                                      >  3:403026‑M2/1‑120 (MQ=255)
                          ttattTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGc                                                                                                                                          >  3:339117/1‑130 (MQ=255)
                          ttattTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGc                                                                                                                                          <  4:339117/130‑1 (MQ=255)
                             tttCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGctt                                                                                                                                                 >  1:410476‑M2/1‑117 (MQ=255)
                             tttCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGctt                                                                                                                                                 <  2:410476‑M2/120‑4 (MQ=255)
                              ttCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGc                                                                                                                  >  3:16914/1‑150 (MQ=255)
                                 ccGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGt                                                                                                               >  4:275254/1‑150 (MQ=255)
                                 ccGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGt                                                                                                               >  2:87208/1‑150 (MQ=255)
                                   gCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatc                                                                                                             <  3:371250‑M2/150‑40 (MQ=255)
                                   gCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatc                                                                                                             <  3:121824‑M2/150‑40 (MQ=255)
                                       aCATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGt                                                                                                         <  1:181871/150‑1 (MQ=255)
                                        cATGACCCTTTTAGCACTCGGTATCACCCACAAACCGGCTCCCGGACCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgt                                                                                                        >  1:635261‑M2/1‑106 (MQ=255)
                                         aTGTCGCTTTTAGGACTCGGTATCACCCATATAACGGCATCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGTCAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgtt                                                                                                       >  4:276689‑M2/1‑105 (MQ=255)
                                         aTGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgtt                                                                                                       <  2:338001‑M2/150‑46 (MQ=255)
                                          tGACCCTTTTAGCACTCGGTATCAACCATAAATCGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgaggcaagcagactaaccctatcaacgttg                                                                                                      >  1:484252‑M2/1‑104 (MQ=255)
                                           gACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCaa                                                                                                     >  4:26033/1‑150 (MQ=255)
                                           gACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCaa                                                                                                     >  3:378011/1‑150 (MQ=255)
                                              ccTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGa                                                                                                                                       <  1:460052/113‑1 (MQ=255)
                                              ccTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCCGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGa                                                                                                                                       >  2:460052/1‑113 (MQ=255)
                                                ttttAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttac                                                                                                                                               <  4:169245‑M2/103‑6 (MQ=255)
                                                ttttAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttac                                                                                                                                               >  3:169245‑M2/1‑98 (MQ=255)
                                                 tttAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCAc                                                                                               <  1:367104/150‑1 (MQ=255)
                                                    aGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttc                                                                                            >  3:57801‑M2/1‑94 (MQ=255)
                                                      cACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttccc                                                                                          >  4:371250‑M2/1‑92 (MQ=255)
                                                       aCTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACt                                                                                         >  1:547739/1‑150 (MQ=255)
                                                        cTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACtt                                                                                        >  1:49923/1‑150 (MQ=255)
                                                         tCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACttt                                                                                       >  3:269026/1‑150 (MQ=255)
                                                         tCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACttt                                                                                       >  4:15142/1‑150 (MQ=255)
                                                             tATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTg                                                                                                                                                <  4:91380/89‑1 (MQ=255)
                                                             tATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTg                                                                                                                                                >  3:91380/1‑89 (MQ=255)
                                                                  aCCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacc                                                                              <  1:431895‑M2/150‑71 (MQ=255)
                                                                  aCCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCg                                                                              >  2:349229/1‑150 (MQ=255)
                                                                  aCCATAAAACGCCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTGGCGCAGCCGATGGTGCAGGCCGGCGTGGTGCCGTCGACGTGCAACCGCACGGAACTTTATCGTAGCg                                                                              >  4:90230/1‑150 (MQ=255)
                                                                   ccATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatga                                                                                <  2:143445‑M2/147‑69 (MQ=255)
                                                                   ccATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatga                                                                                >  1:143445‑M2/1‑79 (MQ=255)
                                                                      tAACACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGAACCGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttt                                                                          >  1:518124‑M2/1‑76 (MQ=255)
                                                                       aaaaCGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGaa                                                                         >  2:613997/1‑150 (MQ=255)
                                                                       aaaaCGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTACTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGaa                                                                         <  3:15787/150‑1 (MQ=255)
                                                                        aaaCGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgaccctttta                                                                        >  1:338001‑M2/1‑74 (MQ=255)
                                                                             gCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAg                                                                   >  3:398879/1‑150 (MQ=255)
                                                                              cACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAgg                                                                  <  4:378011/150‑1 (MQ=255)
                                                                               aCCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcg                                                                 >  2:431895‑M2/1‑67 (MQ=255)
                                                                                 cTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGGCAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGt                                                                                                         <  2:295909/108‑1 (MQ=255)
                                                                                 cTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGGCAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGt                                                                                                         >  1:295909/1‑108 (MQ=255)
                                                                                 cTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGc                                                                     <  4:180975/144‑1 (MQ=255)
                                                                                 cTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGc                                                                     >  3:180975/1‑144 (MQ=255)
                                                                                   gTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcagcctgtattatgcaagcagactaaccctatcaacgtcggtcttatttcccgcagacatgacccttttgacactcggtat                                                             <  4:15787‑M2/150‑88 (MQ=255)
                                                                                    tATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttc                                                                                            >  1:544905‑M2/1‑62 (MQ=255)
                                                                                    tATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttc                                                                                            <  2:544905‑M2/118‑57 (MQ=255)
                                                                                     aTCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatca                                                           <  1:605486‑M2/150‑90 (MQ=255)
                                                                                        gCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCa                                                        <  3:275254/150‑1 (MQ=255)
                                                                                                      tATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaacc                                                                                                                  >  1:531157‑M2/1‑44 (MQ=255)
                                                                                                      tATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaacc                                                                                                                  <  2:531157‑M2/78‑35 (MQ=255)
                                                                                                      gatCGTGGTCGTTGGTTAAGATCGATGAGGCGCCTGATAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacct                                          >  2:276026‑M2/2‑44 (MQ=255)
                                                                                                        tCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGGTAATCCGc                                        >  4:205092/1‑150 (MQ=255)
                                                                                                         cGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCt                                       <  2:49923/150‑1 (MQ=255)
                                                                                                         cGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCt                                       >  2:300517/1‑150 (MQ=255)
                                                                                                          gTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtat                                      >  3:377504‑M2/1‑40 (MQ=255)
                                                                                                           ttttCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGc                                                                                                                                                   >  2:329852‑M2/1‑39 (MQ=255)
                                                                                                           ttttCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGc                                                                                                                                                   <  1:329852‑M2/40‑2 (MQ=255)
                                                                                                                gCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTg                                <  2:605486/150‑1 (MQ=255)
                                                                                                                     aTAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGAtt                           <  4:269026/150‑1 (MQ=255)
                                                                                                                         gCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcaga                                                                                     >  2:194148‑M2/1‑25 (MQ=255)
                                                                                                                         gCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcaga                                                                                     <  1:194148‑M2/88‑64 (MQ=255)
                                                                                                                         gCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATca                       >  2:219279/1‑150 (MQ=255)
                                                                                                                          cTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATcac                      >  2:235796/1‑150 (MQ=255)
                                                                                                                          cTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATcac                      >  4:171827/1‑150 (MQ=255)
                                                                                                                             gATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAAt                   >  4:56951/1‑150 (MQ=255)
                                                                                                                               tCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCt                 >  4:236653/1‑150 (MQ=255)
                                                                                                                                 aGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGc                                                                                                 >  2:547624/1‑68 (MQ=255)
                                                                                                                                 aGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGc                                                                                                 <  1:547624/68‑1 (MQ=255)
                                                                                                                                   gcgcTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAAt             <  3:98127/150‑1 (MQ=255)
                                                                                                                                   gcgcTTGACAGCCCGcttacgcatcctgtatgatgcaagcagactaaccctat                                                                                                              <  2:6470‑M2/53‑39 (MQ=255)
                                                                                                                                   gcgcTTGACAGCCCGcttacgcatcctgtatgatgcaagcagactaaccctat                                                                                                              >  1:6470‑M2/1‑15 (MQ=255)
                                                                                                                                     gcTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATga           <  1:621431/150‑1 (MQ=255)
                                                                                                                                      cTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATgaa          <  1:87208/150‑1 (MQ=255)
                                                                                                                                         gACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATgaagaa       <  3:236653/150‑1 (MQ=255)
                                                                                                                                         gACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATgaagaa       <  4:398879/150‑1 (MQ=255)
                                                                                                                                          aCAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTg                                                                           <  3:238037/81‑1 (MQ=255)
                                                                                                                                          aCAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTg                                                                           >  4:238037/1‑81 (MQ=255)
                                                                                                                                           cAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAagaaga     >  3:110615/1‑150 (MQ=255)
                                                                                                                                            aGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtatcgctgcgagaacgtgtatcgttttcgcc          >  3:20603‑M2/1‑6 (MQ=255)
                                                                                                                                            aGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtatcgctgcgagaacgtgtatcgttttcgcc          <  4:20603‑M2/144‑139 (MQ=255)
                                                                                                                                            aGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGATCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGAt    <  4:16914/150‑1 (MQ=255)
                                                                                                                                              ccTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGAAGTGCAACCGCACGGAACTTTATAATCGAATTGAAGCGAAGAAAAACCTGCAAGAGGCGTTAATCAGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGATCt  <  3:205007/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
GCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGATCT  >  NC_000913_3_pae_tpiA/1263673‑1263964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.