New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 4150329	63 (1.800)	5 (0.150)	5/266	3.9	7.7%	intergenic (‑148/+34)	eptC/ppc	LPS heptose I phosphoethanolamine transferase/phosphoenolpyruvate carboxylase
	?	NC_000913_3_pae_tpiA	= 4150339	61 (1.860)					intergenic (‑158/+24)	eptC/ppc	LPS heptose I phosphoethanolamine transferase/phosphoenolpyruvate carboxylase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGC  >  NC_000913_3_pae_tpiA/4150183‑4150477                                                                                                                                                   |                                                                                                                                                     gTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTcgcg                                                                                                                                                    >  1:521904/1‑149 (MQ=255)         cTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCa                                                                                                                                            >  2:485679/1‑149 (MQ=255)              ttGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAgg                                                                                                                                       >  1:108084/1‑149 (MQ=255)              ttGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAgg                                                                                                                                       <  2:316164/149‑1 (MQ=255)                  aagaaTAGCGGCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGttt                                                                                                                                   <  2:405374/146‑1 (MQ=255)                   aaaaTATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAAAAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTg                                                                                                                                  >  1:14533/1‑149 (MQ=255)                        atCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCagaa                                                                                                                             <  1:207980/149‑1 (MQ=255)                          cGCCGAATTCAACGACAATTCCTTAATGATAGCTGAAGGTATATTCAGAATTAGAATAAAATGCAGACAGAAATATATTGAACACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCagaaga                                                                                                                           <  1:309243/149‑1 (MQ=255)                          cGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCagaaga                                                                                                                           <  1:211986/149‑1 (MQ=255)                          cGCCCAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCagaaga                                                                                                                           <  2:185229/149‑1 (MQ=255)                            ccGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAgg                                                                                                                         >  2:94832/1‑149 (MQ=255)                             cGAATGCAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAGACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGa                                                                                                                        <  1:20574/149‑1 (MQ=255)                                aTGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGa                                                                                                                     >  2:397884/1‑149 (MQ=255)                                     aCGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGc                                                                                                                <  1:6899/149‑1 (MQ=255)                                     aCGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGc                                                                                                                <  1:397884/149‑1 (MQ=255)                                       gACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCg                                                                                                              >  1:65023/1‑149 (MQ=255)                                          aaTTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTa                                                                                                           >  2:514072/1‑149 (MQ=255)                                               cctAAAGATATATGAAGGTAAACTGGGAAGAGTAATAAAAAGCAGACAGAGATATATGGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAATCCGCGCGCAAAAGCACGGGTGTTTGCAGAAGAGGAAGATTAGCCGGTATTACg                                                                                                      <  2:410711/147‑1 (MQ=255)                                               cTTAAGGATATCTGAAGATATATTCAGAATTTGAATAAAATGCAGACAGAAAGATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGACACCCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACg                                                                                                      >  2:111122/1‑149 (MQ=255)                                                  aaGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAGAACCCTCGCGCAAAAGCACGAGGGATTGCAGAAGAGGAAGATTAGCAGGTATTACGCAt                                                                                                   >  1:392300/1‑149 (MQ=255)                                                   aGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATa                                                                                                  >  2:226319/1‑149 (MQ=255)                                                    agATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACGCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGAGTAGCCGGTATTACGCATAc                                                                                                 >  1:588215/2‑149 (MQ=255)                                                         tCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGcc                                                                                            <  1:219368/149‑1 (MQ=255)                                                         tCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGcc                                                                                            >  1:5431/1‑149 (MQ=255)                                                            gAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCa                                                                                         >  1:592503/1‑149 (MQ=255)                                                             aaGGTATATTCAGAATTTGAATAGAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTTAGAAAACACTCGCGCAAAAGCACAAGGGTTGGCAGAAGAGGAAGATTAGCCAGTATAAAGCAGAGTTGTCGCaa                                                                                        >  2:252774/1‑149 (MQ=255)                                                             aaGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCaa                                                                                        >  1:511216/1‑149 (MQ=255)                                                                gTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTGTTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGGCGAGGACGAGTAGCCGGTATTACGCATACCTGCCGCAATcc                                                                                     >  1:171586/1‑149 (MQ=255)                                                                gTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATcc                                                                                     >  2:269048/1‑149 (MQ=255)                                                                  agatcaaGAATTCGAAAAAAAGGAAGACAGAAATATATGGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAACAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCg                                                                                   <  2:588215/143‑1 (MQ=255)                                                                   tatTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCgg                                                                                  <  2:108084/149‑1 (MQ=255)                                                                     ttCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCa                                                                                >  1:126692/1‑149 (MQ=255)                                                                               gAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCa                                                                      <  1:1436/149‑1 (MQ=255)                                                                               gAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTACCCGGTATTACGCATACCTGCCGCAATCCCGTCAATAGTGAcaa                                                                      >  1:446204/1‑147 (MQ=255)                                                                                  tAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCACCCCGGGCAATACTGACCCTTa                                                                   >  2:619831/1‑149 (MQ=255)                                                                                   aaaaTGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGACGGTATTACGCAAACCAGCCGCAATCCCGGTAATAGTGACCATTaa                                                                  <  2:521904/149‑1 (MQ=255)                                                                                            acagaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCGATCCCGGCAATAGTGACCATTAACGCTTGTTc                                                         >  1:53767/1‑149 (MQ=255)                                                                                            acagaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTc                                                         <  1:89999/149‑1 (MQ=255)                                                                                            acagaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTc                                                         >  1:507509/1‑149 (MQ=255)                                                                                            acagaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCATgctt                                                         >  1:295373/1‑146 (MQ=255)                                                                                               gaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAAAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCAGCCATAGTGACCATTAACGCTTGTTCGAc                                                      <  2:5431/149‑1 (MQ=255)                                                                                                    atatTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAg                                                 <  1:165083/149‑1 (MQ=255)                                                                                                            aaCGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCGGCCGCAATCCCGGCCATAGTGACCATTAACGCTTGCTCGACGCCAGGATCCGGt                                         >  2:547616/1‑149 (MQ=255)                                                                                                            aaCGAGGGTGTTAGAACACAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGt                                         <  1:76960/149‑1 (MQ=255)                                                                                                              cGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTc                                       <  1:466200/149‑1 (MQ=255)                                                                                                                aGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCt                                     <  1:94832/149‑1 (MQ=255)                                                                                                                aGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCt                                     <  2:511216/149‑1 (MQ=255)                                                                                                                    tgtTATAACAGAATTATGTGAGAAAACCCGCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGCTCAGCCGGTATTACGCCTGCCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGcc                                 <  2:459147/149‑1 (MQ=255)                                                                                                                          aaCAGAAGTATTTCAGAAAACCCCCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCttt                           <  1:365401/149‑1 (MQ=255)                                                                                                                             aGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTc                        >  2:94773/1‑149 (MQ=255)                                                                                                                             aGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTc                        >  1:486121/1‑149 (MQ=255)                                                                                                                                aGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCCTACCTGCCGCAATACCGGAACAACACACCAGGAACGCTTGTTCGACGCGCGGCTCCGGTTCCTGGCCTTCTTTTACTGc                     >  1:118160/1‑149 (MQ=255)                                                                                                                                    tttCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCTGGTATTCCGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTgg                 <  2:471853/149‑1 (MQ=255)                                                                                                                                    tttCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTgg                 >  2:457182/1‑149 (MQ=255)                                                                                                                                       cAGAAAACCCCCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTAAACATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCgg              <  1:120808/149‑1 (MQ=255)                                                                                                                                        aGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTAAAAAGCGATTAGTCGGTTCCTGGCCTTCTTTTTCTGCCTGGCggg             <  1:305021/149‑1 (MQ=255)                                                                                                                                         gAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGa            <  1:542365/149‑1 (MQ=255)                                                                                                                                           aaaCCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGc          <  2:65023/149‑1 (MQ=255)                                                                                                                                              cccTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGt       <  1:485679/149‑1 (MQ=255)                                                                                                                                               ccTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTg      <  2:14533/149‑1 (MQ=255)                                                                                                                                                cTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGGGAGGTTCCGGGTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTgc     >  1:359392/1‑149 (MQ=255)                                                                                                                                                 tCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCGTTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTgca    >  1:134278/1‑149 (MQ=255)                                                                                                                                                   gcgcAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTgcagc  <  1:175286/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     GTAAGAACCTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGC  >  NC_000913_3_pae_tpiA/4150183‑4150477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.