New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 4150329	63 (1.800)	5 (0.150)	5/266	3.9	7.7%	intergenic (‑148/+34)	eptC/ppc	LPS heptose I phosphoethanolamine transferase/phosphoenolpyruvate carboxylase
	?	NC_000913_3_pae_tpiA	= 4150339	61 (1.860)					intergenic (‑158/+24)	eptC/ppc	LPS heptose I phosphoethanolamine transferase/phosphoenolpyruvate carboxylase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAAC  >  NC_000913_3_pae_tpiA/4150191‑4150480                                                                                                                                                     |                                                                                                                                              cTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCa                                                                                                                                               >  2:485679/1‑149 (MQ=255)      ttGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAgg                                                                                                                                          >  1:108084/1‑149 (MQ=255)      ttGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAgg                                                                                                                                          <  2:316164/149‑1 (MQ=255)          aagaaTAGCGGCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGttt                                                                                                                                      <  2:405374/146‑1 (MQ=255)           aaaaTATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAAAAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTg                                                                                                                                     >  1:14533/1‑149 (MQ=255)                atCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCagaa                                                                                                                                <  1:207980/149‑1 (MQ=255)                  cGCCGAATTCAACGACAATTCCTTAATGATAGCTGAAGGTATATTCAGAATTAGAATAAAATGCAGACAGAAATATATTGAACACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCagaaga                                                                                                                              <  1:309243/149‑1 (MQ=255)                  cGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCagaaga                                                                                                                              <  1:211986/149‑1 (MQ=255)                  cGCCCAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCagaaga                                                                                                                              <  2:185229/149‑1 (MQ=255)                    ccGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAgg                                                                                                                            >  2:94832/1‑149 (MQ=255)                     cGAATGCAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAGACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGa                                                                                                                           <  1:20574/149‑1 (MQ=255)                        aTGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGa                                                                                                                        >  2:397884/1‑149 (MQ=255)                             aCGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGc                                                                                                                   <  1:6899/149‑1 (MQ=255)                             aCGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGc                                                                                                                   <  1:397884/149‑1 (MQ=255)                               gACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCg                                                                                                                 >  1:65023/1‑149 (MQ=255)                                  aaTTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTa                                                                                                              >  2:514072/1‑149 (MQ=255)                                       cctAAAGATATATGAAGGTAAACTGGGAAGAGTAATAAAAAGCAGACAGAGATATATGGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAATCCGCGCGCAAAAGCACGGGTGTTTGCAGAAGAGGAAGATTAGCCGGTATTACg                                                                                                         <  2:410711/147‑1 (MQ=255)                                       cTTAAGGATATCTGAAGATATATTCAGAATTTGAATAAAATGCAGACAGAAAGATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGACACCCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACg                                                                                                         >  2:111122/1‑149 (MQ=255)                                          aaGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAGAACCCTCGCGCAAAAGCACGAGGGATTGCAGAAGAGGAAGATTAGCAGGTATTACGCAt                                                                                                      >  1:392300/1‑149 (MQ=255)                                           aGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATa                                                                                                     >  2:226319/1‑149 (MQ=255)                                            agATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACGCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGAGTAGCCGGTATTACGCATAc                                                                                                    >  1:588215/2‑149 (MQ=255)                                                 tCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGcc                                                                                               <  1:219368/149‑1 (MQ=255)                                                 tCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGcc                                                                                               >  1:5431/1‑149 (MQ=255)                                                    gAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCa                                                                                            >  1:592503/1‑149 (MQ=255)                                                     aaGGTATATTCAGAATTTGAATAGAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTTAGAAAACACTCGCGCAAAAGCACAAGGGTTGGCAGAAGAGGAAGATTAGCCAGTATAAAGCAGAGTTGTCGCaa                                                                                           >  2:252774/1‑149 (MQ=255)                                                     aaGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCaa                                                                                           >  1:511216/1‑149 (MQ=255)                                                        gTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTGTTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGGCGAGGACGAGTAGCCGGTATTACGCATACCTGCCGCAATcc                                                                                        >  1:171586/1‑149 (MQ=255)                                                        gTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATcc                                                                                        >  2:269048/1‑149 (MQ=255)                                                          agatcaaGAATTCGAAAAAAAGGAAGACAGAAATATATGGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAACAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCg                                                                                      <  2:588215/143‑1 (MQ=255)                                                           tatTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCgg                                                                                     <  2:108084/149‑1 (MQ=255)                                                             ttCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCa                                                                                   >  1:126692/1‑149 (MQ=255)                                                                       gAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCa                                                                         <  1:1436/149‑1 (MQ=255)                                                                       gAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTACCCGGTATTACGCATACCTGCCGCAATCCCGTCAATAGTGAcaa                                                                         >  1:446204/1‑147 (MQ=255)                                                                          tAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCACCCCGGGCAATACTGACCCTTa                                                                      >  2:619831/1‑149 (MQ=255)                                                                           aaaaTGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGACGGTATTACGCAAACCAGCCGCAATCCCGGTAATAGTGACCATTaa                                                                     <  2:521904/149‑1 (MQ=255)                                                                                    acagaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCGATCCCGGCAATAGTGACCATTAACGCTTGTTc                                                            >  1:53767/1‑149 (MQ=255)                                                                                    acagaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTc                                                            <  1:89999/149‑1 (MQ=255)                                                                                    acagaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTc                                                            >  1:507509/1‑149 (MQ=255)                                                                                    acagaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCATgctt                                                            >  1:295373/1‑146 (MQ=255)                                                                                       gaAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAAAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCAGCCATAGTGACCATTAACGCTTGTTCGAc                                                         <  2:5431/149‑1 (MQ=255)                                                                                            atatTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAg                                                    <  1:165083/149‑1 (MQ=255)                                                                                                    aaCGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCGGCCGCAATCCCGGCCATAGTGACCATTAACGCTTGCTCGACGCCAGGATCCGGt                                            >  2:547616/1‑149 (MQ=255)                                                                                                    aaCGAGGGTGTTAGAACACAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGt                                            <  1:76960/149‑1 (MQ=255)                                                                                                      cGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTc                                          <  1:466200/149‑1 (MQ=255)                                                                                                        aGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCt                                        <  2:511216/149‑1 (MQ=255)                                                                                                        aGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCt                                        <  1:94832/149‑1 (MQ=255)                                                                                                            tgtTATAACAGAATTATGTGAGAAAACCCGCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGCTCAGCCGGTATTACGCCTGCCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGcc                                    <  2:459147/149‑1 (MQ=255)                                                                                                                  aaCAGAAGTATTTCAGAAAACCCCCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCttt                              <  1:365401/149‑1 (MQ=255)                                                                                                                     aGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTc                           >  1:486121/1‑149 (MQ=255)                                                                                                                     aGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTc                           >  2:94773/1‑149 (MQ=255)                                                                                                                        aGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCCTACCTGCCGCAATACCGGAACAACACACCAGGAACGCTTGTTCGACGCGCGGCTCCGGTTCCTGGCCTTCTTTTACTGc                        >  1:118160/1‑149 (MQ=255)                                                                                                                            tttCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCTGGTATTCCGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTgg                    <  2:471853/149‑1 (MQ=255)                                                                                                                            tttCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTgg                    >  2:457182/1‑149 (MQ=255)                                                                                                                               cAGAAAACCCCCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTAAACATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCgg                 <  1:120808/149‑1 (MQ=255)                                                                                                                                aGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTAAAAAGCGATTAGTCGGTTCCTGGCCTTCTTTTTCTGCCTGGCggg                <  1:305021/149‑1 (MQ=255)                                                                                                                                 gAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGa               <  1:542365/149‑1 (MQ=255)                                                                                                                                   aaaCCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGc             <  2:65023/149‑1 (MQ=255)                                                                                                                                      cccTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGt          <  1:485679/149‑1 (MQ=255)                                                                                                                                       ccTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTg         <  2:14533/149‑1 (MQ=255)                                                                                                                                        cTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGGGAGGTTCCGGGTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTgc        >  1:359392/1‑149 (MQ=255)                                                                                                                                         tCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCGTTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTgca       >  1:134278/1‑149 (MQ=255)                                                                                                                                           gcgcAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTgcagc     <  1:175286/149‑1 (MQ=255)                                                                                                                                             gcAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCaa   >  1:112948/1‑149 (MQ=255)                                                                                                                                             gcAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCGGGCGGGAGCGGTGCAGCaa   <  2:507509/149‑1 (MQ=255)                                                                                                                                              cAAAAGCACGAGGGTGTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAAc  <  2:397768/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                              CTGTCTTGAAAAAATATCGCCGAATGTAACGACAATTCCTTAAGGATATCTGAAGGTATATTCAGAATTTGAATAAAATGCAGACAGAAATATATTGAAAACGAGGGTGTTAGAACAGAAGTATTTCAGAAAACCCTCGCGCAAAAGCACGAGGGTTTGCAGAAGAGGAAGATTAGCCGGTATTACGCATACCTGCCGCAATCCCGGCAATAGTGACCATTAACGCTTGTTCGACGCGAGGATCCGGTTCCTGGCCTTCTTTTTCTGCCTGGCGGGAGCGGTGCAGCAAC  >  NC_000913_3_pae_tpiA/4150191‑4150480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.