| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913_3_pae_tpiA | 1,756,121 | Δ557 bp | coding (424‑980/1413 nt) | pykF → | pyruvate kinase I |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913_3_pae_tpiA | 1756121 | 1756677 | 557 | 42 [0] | [0] 42 | pykF | pyruvate kinase I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 1756120 | 0 (0.000) | 42 (1.280) | 37/286 | 0.1 | 100% | coding (423/1413 nt) | pykF | pyruvate kinase I |
| ? | NC_000913_3_pae_tpiA | 1756678 = | 0 (0.000) | coding (981/1413 nt) | pykF | pyruvate kinase I | |||||
CCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAGTTATCTGTAAAGTGCTGAACAACGGTGACCTGGGCGAAAACAAAGGTGTGAACCTGCCTGGCGTTTCCATTGCTCTGCCAGCACTGGCTGAAAAAGACAAACAGGACCTGATCTTTGGTTGCGAACAAGGCGTAGACTTTGTTGCT > NC_000913_3_pae_tpiA/1755978‑1756267 | ccacTGATAAATCTGTTCTCTGGAACAGCGGACTTGTGTCGGGAACGTAGGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggc < 1:220910‑M1/149‑7 (MQ=255) cacTGATAAATCTGTTACCGCCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcg > 2:182621‑M1/1‑142 (MQ=255) acTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcga > 2:398358‑M1/1‑141 (MQ=255) tCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCCTTGAAGGTACCAAAcatggcgcccatctccg > 2:349649‑M1/1‑132 (MQ=255) cTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcga < 1:433735‑M1/149‑19 (MQ=255) aTCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGGAGGTAACAAAcatggcgaccatctgcgaacgta > 1:142967‑M1/1‑126 (MQ=255) tCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtac < 1:389913‑M1/149‑25 (MQ=255) aCAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCAATTGAAGGTAACAAAcatggcgaccatcttcgaacgtaccaaccg > 1:96011‑M1/1‑119 (MQ=255) aGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTGTGGAAGTTACCGGCATTGAAGGTAACAAAcatggcgaccatctgcgactgtaccgggcggg > 2:156077‑M1/1‑117 (MQ=255) aGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcg > 1:442153‑M1/1‑117 (MQ=255) gAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgccaccgtaccgaccgcgtga > 2:399898‑M1/1‑114 (MQ=255) aaaTGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgat > 2:463707‑M1/1‑113 (MQ=255) gTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcagggcgaccatctgcgaacgtaccgaccgcgtgatgaaca < 1:190114‑M1/149‑42 (MQ=255) gTTGCGGTAACGTATGAAGGTTTCACTACCGAGCTGGAAATGGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaaca > 1:137549‑M1/1‑108 (MQ=255) gCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagcc < 1:180143‑M1/149‑45 (MQ=255) cGTATCGAGGTTTCACTCCTGACCTGTCTGTGGGCAACACCGTACGGGTCGACGATGGTCTGTTCGGTATGGAAGGTACCGCCACTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtcccaa < 2:387952‑M1/149‑52 (MQ=255) aTGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgcaatgaacagccgtcgagagtt > 2:478416‑M1/1‑95 (MQ=255) aaGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaa > 2:195846‑M1/1‑92 (MQ=255) aaGGTTTCACTACTGACCAGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcagggcgaccatctgcgaacgtcccgaccgcgtgctgaacagccgtcgcgagttcta > 2:451647‑M1/1‑92 (MQ=255) ggTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaaca < 1:340350‑M1/149‑60 (MQ=255) tttCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaat < 1:554630‑M1/149‑62 (MQ=255) tCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatga < 1:195846‑M1/149‑64 (MQ=255) tactGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaac > 1:66354‑M1/1‑82 (MQ=255) tGACCTGTCTGTTGGCAACACCGTACTGGTTAAAGAAGTTCTGATCGGAATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgcctcgagttcaaccatgacaaccgc > 2:123729‑M1/1‑79 (MQ=255) ttGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaa < 2:288160‑M1/87‑20 (MQ=255) ttGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaa > 1:288160‑M1/1‑68 (MQ=255) tgggcaACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatgtcgaccatctgcgaacgtaccgaccgcgtgatgaccagccgtctcgagctcaacaatgacaaccgtaaactacccat > 2:364790‑M1/3‑68 (MQ=255) cGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaacggcgcattaccgaggcg > 1:149542‑M1/1‑58 (MQ=255) gACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtg < 1:85265‑M1/149‑102 (MQ=255) cGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggt < 1:398358‑M1/149‑104 (MQ=255) tCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgtt < 1:64473‑M1/149‑110 (MQ=255) tCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgtt > 2:535539‑M1/1‑40 (MQ=255) tGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttga < 1:535539‑M1/149‑112 (MQ=255) aTCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccggtgaaa > 1:16217‑M1/1‑36 (MQ=255) tGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctga > 1:300142‑M1/1‑29 (MQ=255) tGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccatggagcagatgaaactgctgc > 2:376634‑M1/1‑29 (MQ=255) aTTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaaaactggatgctc < 2:300142‑M1/149‑135 (MQ=255) aaGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacactgacaaccgtaaactgcgcattaccgaagcgggatgccgtggtcacgttgaacctgctgaaaaactggctgctccgct > 2:333533‑M1/1‑11 (MQ=255) aacaaacatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtctgcagtggtgccgttgaaactgctgaaaaacgggatgctcccctgatcg > 2:324483‑M1/1‑6 (MQ=255) aaacatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcatt > 2:72569‑M1/1‑3 (MQ=255) aaacatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcatt < 1:72569‑M1/85‑83 (MQ=255) aacatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaaaactggatgccccgctgatcgtggt > 1:9427‑M1/1‑2 (MQ=255) | CCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAGTTATCTGTAAAGTGCTGAACAACGGTGACCTGGGCGAAAACAAAGGTGTGAACCTGCCTGGCGTTTCCATTGCTCTGCCAGCACTGGCTGAAAAAGACAAACAGGACCTGATCTTTGGTTGCGAACAAGGCGTAGACTTTGTTGCT > NC_000913_3_pae_tpiA/1755978‑1756267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |