New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 202486342 (0.080)709 (0.160) 114/252 18.1 65.9% intergenic (+264/‑411) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
?CP016816 202490 = 391 (0.090)intergenic (+268/‑407) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 709 total aligned reads displayed.

GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202360‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTAT  >  CP016816/202490‑202615
                                                                                                                                                                                                                                                                   
GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTA                                                                                                                                    >  1:7364265/1‑128
 TTATTGTTAATAATTATGTTAAGGGTAATTAAAATACCATAAACTTAAAAATTCTTATAATGTACAACCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAA                                                                                                                                   <  1:8512342/128‑1
 TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAACAATACCATTAAA                                                                                                                                  >  2:9473473/1‑128
  TAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGAGATCTATTTTTTTAATTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAA                                                                                                                                  >  2:2514186/1‑128
   AGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATCTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTAACAAATAAAAAAAAAAAAATCACCTAAAAA                                                                                                                                 >  2:8892536/1‑128
        AAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAAAAAAACCATAAAAAAT‑‑AAA                                                                                                                        >  1:7854286/1‑128
        AAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAAATCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACACCTAAAAAAT‑‑AAA                                                                                                                        >  1:7243335/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCAACTAAAAAAT‑‑AAAA                                                                                                                       >  1:7152349/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTAACAAATAAAAAAAAAACAAACACCATAAAAAA‑‑AAAA                                                                                                                       >  1:6309285/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTATATCTTCACAAATAAAAAAAAACAAACCAATAAAAAAT‑‑AAAAA                                                                                                                      >  2:2790982/1‑128
         AATAATAGAGTTAAGGTAAATTAAAATACTATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACAAATAAAAAAT‑‑AAAA                                                                                                                       >  2:4481545/1‑128
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGCTCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTAAAATAT‑‑AAAA                                                                                                                       >  2:8609081/1‑128
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATAACATTAAAAAT‑‑TAAAA                                                                                                                      >  1:1199557/1‑128
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATACCCTTAAAAAT‑‑TAAAA                                                                                                                      >  2:483881/1‑128
           TAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAAAAATCCCATAAAAAAA‑‑TAAAAA                                                                                                                     >  2:9126588/1‑128
            AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTATTTATCTTCACAAATAAAAAAAAAACAAAAACCTAAAAAAT‑‑TAAAAAA                                                                                                                    >  1:888092/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCATTAAAAAT‑‑TAAAAAAAA                                                                                                                 >  2:5098119/1‑128
               AGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAAAAAACCCCTTAAAAAT‑‑TAAAAAAAAA                                                                                                                >  2:2104037/1‑128
               AGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTTATCTATTTTTTTATTTATTTATATTCACAAATAAAAAAAAAACAAACACATAAAAAAA‑‑AAAAAAAAAA                                                                                                                >  2:4286502/1‑128
               AGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAAACCCAAAAAAAA‑‑TAAAAAAAAA                                                                                                                >  2:6082849/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TATAAAAAAAAAAA                                                                                                            >  2:8657213/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAA                                                                                                            >  2:3373525/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAACAATACCCTTAAAAAT‑‑AAAAAAAAAAAAAAA                                                                                                           >  2:9264446/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTACACAAATAAAAAAAAAACAATACACTAAAAAAA‑‑AAAAAAAAAAAAAA                                                                                                            >  2:3910972/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTATTGATCTATTTTTTTATTTGTTTATCTTAACAAATAAAAAAAAAACAATAACATAAAAAAT‑‑TAAAAAAAAAAAAA                                                                                                            >  1:7473720/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAA                                                                                                          >  1:1035038/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATCACATTAAAAAT‑‑TAAAAAAAAAAAAAAA                                                                                                          >  1:7277164/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAATCCAATAAAAAAT‑‑AAAAAAAAAAAAAAAAA                                                                                                         >  1:8252151/1‑128
                       tGTTAAATAAAATAACATAAAATTAAAAAATCTTAAAATGTATATCATCGTGATATATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        <  1:6849842/127‑1
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATATTCACAAATAAAAAAAAAACAATCCACATAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        >  2:6344218/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        >  1:8109831/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAAAACATTAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        >  2:9360642/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTAAAAAATAAAAAAAAAACAATCAAATTAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        >  1:8439354/1‑128
                          TAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAACAATCCCATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAa                                                                                                    >  1:2432259/1‑127
                           AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAAACCACTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAa                                                                                                    >  1:9047121/1‑127
                           AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAa                                                                                                    >  2:7268987/1‑127
                           AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCACTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAa                                                                                                    >  2:2356655/1‑127
                            ATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAACAAACCACTAAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAaaa                                                                                                  >  2:3081405/1‑125
                             TTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATATTTTTATTTTTTTATATTAAAAAATAAAAAAAAAAAAAAAACAATAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAAaaa                                                                                                  >  2:1448032/1‑125
                             TTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAACAATCCCATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAaaaa                                                                                                 >  1:8203634/1‑124
                               AAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATCCACTAAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAaaaaa                                                                                                >  2:7916733/1‑123
                                AAATACCATAAACTTAATAATTCTTATAATGTATATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACAAAAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAATAAAAA                                                                                              >  2:466573/1‑128
                                 AATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTAAAAAATT‑‑AAAAAAAAAAAATAAAAAAAAATAAAA                                                                                               >  2:7476321/1‑128
                                 AATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAAACCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAAAAAAAA                                                                                              >  2:5262963/1‑128
                                      CATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTAATTTTTTATTTGTTTATCTTCACAAATTAAAAAAAAACAATAACCTTAAAATA‑‑AAAAAAAAAAAAAAAAAAAAAATAAACACAAAa                                                                                         >  2:5024110/1‑127
                                                  AATTCTTATAATTTATATCCTCGTGATCTATTTTTTTATTTTTTTATATTAAAAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑‑‑TAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAAT                                                                          <  1:472189/128‑1
                                                     TCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACAAAAAAAAAACTAAATTTATTAAAAT                                                                          >  2:7197485/1‑128
                                                                tatTCCTCGTTATTAATTTTTTTATTTTTTTAAATTAAAAAAAAAAAAAAAAACAAACCCCTTAAAAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATAC                                                              <  2:562859/125‑1
                                                                   taCTCGTTATCTATTTTTTTATTTTTTTATCATTAAAAAAAAAAAAAAAAAAAATACCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCA                                                            <  1:3222672/126‑1
                                                                    tctagtttttttTTTTTTTTTTTTTTTATTTTCAAAAATAAAAAAAAAAAAATTACCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCAC                                                           <  2:8321074/116‑1
                                                                       cttttttTATTTTTTTATTTTTTTAATTTAAAAAAAAAAAAAAAAAAAAACCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATT                                                        <  1:7731394/121‑1
                                                                        gtttttTATTTTTTTATTTTTTTTTTTTAAAAAATAAAAAAAAAAAAATCCCCTTAAAAT‑‑TTAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTT                                                      <  2:7991321/122‑1
                                                                         TGATCTATTTTTTTATTTGTTTATATTAACAAAAAAAAAAAAAAAAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTT                                                      <  1:9236117/128‑1
                                                                          tataaATTTTTTTATTTTTTTATATTAAAAAATAAAAAAAAAAAAAACCCATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTA                                                     <  1:9574356/123‑1
                                                                           ttaTATTTTTTTAATTTTTTATATTAACAAAAAAAAAAAAAACAAACCCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTA                                                     <  1:868405/125‑1
                                                                             tttTTTTTTTTTTTTTTTAAATTAAAAAAAAAAAAAAAAAAAATCACCATAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTT                                                  <  2:8146734/125‑1
                                                                             attTTTATTTATTTTTATATATTAAAAAATAAAAAAAAAAAAAAACCCTTAAAAA‑‑ATAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTT                                                 <  1:3846473/125‑1
                                                                              TATTTTTTTATTTTTTTTTTATAAAAAAATAAAAAAAAACAATCCACTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                                <  1:3504933/128‑1
                                                                              TATTTTTTTATTTTTTTATATTAAAAAATAAAAAAAAAAAAAACCCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTAaaa                                                  <  2:7622630/128‑4
                                                                              TATTTTTTTATTTGTTTATCTTCAAAAATAAAAAAAAAAAATACCATTAAAA‑‑AATAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAA                                              <  1:523466/128‑1
                                                                                TTTTTTTATTTTTTTAACTTAAAAAAAAAAAAAAAAAAAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTA                                               <  1:2870273/128‑1
                                                                                 TTTTTTATTTTTTTAAAATAAAAAAAAAAAAAAAAAAAAACCCCTTAAAAAA‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAA                                              <  1:2195509/128‑1
                                                                                  TTTTTAATTTTTTAAATTAAAAAATAAAAAAAAAAAAATACCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAA                                             <  1:8325962/128‑1
                                                                                      ttaTTGTTTAACTTAAAAAAAAAAAAAAAAAAAAACCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAG                                        <  2:1098591/125‑1
                                                                                      ttTTTTTTTATCTTAAAAAATAAAAAAAAAAAAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAG                                        <  1:3692427/126‑1
                                                                                      TATTTTTTTATCTTAAAAAAAAAAAAAAAAAAAATACCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAG                                        <  1:7945990/128‑1
                                                                                      TATTTTTTTAAATTTAAAAAAAAAAAAAAAAAAATCACCATAAAAA‑‑ATAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAG                                        <  1:1982974/128‑1
                                                                                       ATTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAATACCCTTAAAAAT‑‑TTAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAG                                        <  2:8762615/128‑1
                                                                                        TTTTTTTATATTAACAAATAAAAAAAAAAAAATACACTTTAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGA                                       <  1:4955385/128‑1
                                                                                         tttTTTATCTTCAAAAATAAAAAAAAAAAAAACCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                     <  1:7321251/125‑1
                                                                                           tTTTATATTCAAAAAAAAAAAAAAAAAAAAAACCTTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                   <  1:9459323/127‑1
                                                                                           tTTTATATTAAAAAATAAAAAAAAAAAAATACAATTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                     <  1:6594323/127‑1
                                                                                            gttttatataaaAAATAAAAAAAAAAAAAATCACTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                     <  1:8635502/116‑1
                                                                                            TTTATCTTCACAAATAAAAAAAAAAAAAAACCCTTAAAAATT‑‑AAAAAAAATAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                     <  2:3262083/128‑1
                                                                                             tttatttaataAAAAAAAAAAAAAAAAATACCATTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTG                                  <  1:3082460/117‑1
                                                                                             taaaaaaaaaaAAAAAAAAAAAAAAAAACCCCTTTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                   <  2:9589453/117‑1
                                                                                              ttaaattaaaAAAAAAAAAAAAAAAAAAACACTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                   <  1:2728347/118‑1
                                                                                                atattaaaAAAAAAAAAAAAAAAAATACCAATAAAAAT‑‑‑‑TAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                              <  1:2514186/120‑1
                                                                                                 tataaACAAAAAAAAAAAAAAAAAACCCAATAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                               <  1:6084508/123‑1
                                                                                                 taataaaAAATAAAAAAAAAAAAATACAATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                               <  1:4405866/121‑1
                                                                                                  ttcaaaataaAAAAAAAAAAAAAACCCTATAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAATATATTGACA                               <  1:580915/118‑1
                                                                                                    aaaaAAATAAAAAAAAAAAATCCCCTTAAAAAT‑‑‑‑‑TAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                        <  2:7377978/124‑1
                                                                                                      ACAAAAAAAAAAAAAACAATAACCTTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACAACATTTTATTTTTAAAATAAGATATTGACATAA                            <  1:5470962/128‑1
                                                                                                          aaAAAAAAAAAAAAATTAAATTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                        <  2:1035321/126‑1
                                                                                                           TAAAAAATAAACAATTCCCTTAAAAATT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACAACATTTTATTTTTAAAATAAGATATTGACATAATATATA                      <  1:8756373/128‑1
                                                                                                            tAAAAAAAAAAAATACCATTAAAAAT‑‑‑‑TAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTA                  <  2:8237176/127‑1
                                                                                                            AAAAAAAAAAAAATAAACTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATAT                     <  2:8056037/128‑1
                                                                                                             aatAAAAAAAAATACCCTTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTA                  <  1:7401347/125‑1
                                                                                                              AAAAAAAAAAATAACCATAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAA                 <  2:7776736/128‑1
                                                                                                              AAAAAAAAAAAAACACTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAA                 <  2:3438013/128‑1
                                                                                                               AAAAAAAAAATTCAATTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTA                  <  1:9331119/128‑1
                                                                                                                AAAAAAAAATAACCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAATACAAACTCTATTTCTTAAAATTACCTATTATAACACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAA                 <  1:1486441/128‑1
                                                                                                                  aaaaaaaaacaaTTAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATA               <  1:1831377/116‑1
                                                                                                                   AAACAATACACTTAAAAAA‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATA             <  1:415737/128‑1
                                                                                                                        ataccaTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAA        <  1:7623790/122‑1
                                                                                                                         aaCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCACTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATA      <  1:5084876/126‑1
                                                                                                                           caaTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACT    <  2:8439354/125‑1
                                                                                                                            caTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAAATCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACT    <  1:4853969/126‑1
                                                                                                                              cTAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTA   <  2:1759714/127‑1
                                                                                                                              TTAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTA   <  2:4955770/128‑1
                                                                                                                                                                                                                                                                   
GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202360‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTAT  >  CP016816/202490‑202615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.