| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437880 | 859 (0.330) | 634 (0.200) +ATAT |
116/186 | 20.7 | 35.9% | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437881 = | 1231 (0.370) | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 742 total aligned reads displayed.
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑A > 1:6702054/1‑128GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑A < 2:3797200/128‑1 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑AT > 1:2799842/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑AT > 1:6830019/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑AT > 2:5263798/1‑128 ACTTATTTTTGTAGTTGTATGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATAT > 1:2346787/1‑128 CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGAAAATGAAGCAAAGCAAAAACATCCATATTACCTATAGAGTTAATG‑‑ATATA > 1:4965364/1‑128 TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAAGCAAATCAAAAACCTCCATATTAACTATAGATTTAATG‑‑ATATATA > 2:4864095/1‑128 TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATA > 2:5543755/1‑128 TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAAG‑‑ATATATA > 1:5909951/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTTAAATAAATATTTTAGGAAATGAAGCAAAGCATAAACCTCCATATTAGCTATAGAGTTAATG‑‑ATATATAT > 1:1492005/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATAT > 2:3957485/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATAT > 1:4063205/1‑128 tgTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATA > 2:5647379/3‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGATATGAAGCAAAGCAAAAACATACATATTACCTATAGAGTTAATG‑‑ATATATATA > 2:7136427/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAGTTAATG‑‑ATATATATA > 1:1727972/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACATCCATATTACCTATAGAGTTAATG‑‑ATATATATA > 1:4514208/1‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATAT > 2:2905397/1‑128 actacaaaaaTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA > 1:7155546/11‑128 TTTGTAGTTGTAAGTTTCATTTTTTATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACATCCATAATACCTATAGAGTTAATG‑‑ATATATATATA > 1:758001/1‑128 TTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACCTCAATATTACATATAGATTTAATG‑‑ATATATATATA > 2:606684/1‑128 TTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATAT > 2:3424648/1‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATA < 1:3192243/128‑1 caaaaaTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑ATATATATATATATA > 2:3103179/7‑128 attttttAGTTTCATTATTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATAT < 1:3003487/121‑1 AGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATAT > 1:269150/1‑128 AGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATAT > 1:4725424/1‑128 AGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAATCAAAAAACTCCATATTACCTATATAGTTAATG‑‑ATATATATATATATAT > 2:4680667/1‑128 GTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATA < 1:6182757/128‑1 GTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATA > 1:1794700/1‑128 GTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATA > 1:2118477/1‑128 TTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATAT > 2:4558403/1‑128 TTGTAAGTTTCATATTTAATAAATATTAGATATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑ATATATATATATATATAT < 1:1301069/128‑1 TGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATA > 2:5157319/1‑128 ttatGTTTCATTTTTAATAAATATTAGATATAAAAAATGTATATTTTAAATAAATATTTTATTATATGAATCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATAT < 2:1039764/124‑1 GTAATTTTCTTTTTTAATAAATATTTTAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAATAAAAGCAAAAAACTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATAT < 1:5644640/128‑1 GTAAGTTTCATTTTTAATAAATATAAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATAT < 2:5441163/128‑1 TAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA < 2:1844402/128‑1 TAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA < 1:6300748/128‑1 TAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAATG‑‑ATATATATATATATATATATA < 2:3752613/128‑1 aatTTTAATTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATAT < 1:3463666/125‑1 AAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATAT > 2:3286427/1‑128 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATAT > 2:2189528/1‑128 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATAT > 1:2184353/1‑128 TTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATA < 1:6606506/128‑1 TTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATA > 2:5995993/1‑128 TTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATA > 2:85931/1‑128 TTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATA < 1:5236863/128‑1 ATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATTTATATATTTATA > 1:908344/1‑128 TTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑TATATc > 2:2545879/1‑127 atATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTATATGAAGCAAATAAAAAAACTACATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATgcaagcga < 1:3759447/126‑9 TAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATgcaagcga < 1:3316467/128‑9 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATAggcaagcgatc > 2:3564817/1‑117 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATAAATAAATATATATAAATAcaata > 1:204845/1‑123 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAAAATCCATATTACATATAGATATAATG‑‑ATATATATATATATATATATATATATATAaaaaa > 2:2081512/1‑123 AATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATgcaagcgatc > 2:7038183/1‑117 ATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATgaaagcgatc > 2:6713951/1‑118 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATAatctagatca > 2:1283894/1‑118 TAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATTATATCGATCAG > 1:1194025/1‑128 AGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGAAT > 2:6850064/1‑128 gaataAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAACCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATA < 2:5731859/123‑1 AAATAAAAATTGTATATTTAAAATAAATATTTTAGGAAATGAATCAAAGAAAAAAACTACATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAA < 2:2842108/128‑1 ATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGAAAAGCAAAAACCTCAATATTACATATAGAGATAATGATATATATATATATATATATATATATATATATATGCAAGCGATCAGCAT < 2:6381324/128‑1 TAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATAT‑T‑CAAGCGATAAGAATAAAtt > 1:7071084/1‑126 TAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATCAAAGCGATCAGCATAAAAa > 2:4435370/1‑127 TTGTATATTTAAAATAAATATTTTAGGAAATTAATCAAAGAAAAAACCTCCATATTACCTATAGAGATAATG‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTG < 2:5852707/128‑1 ATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATA‑‑CTAGAGATCATAATAAAATGGAGATATat > 1:6040097/1‑126 TTTTTAAAATAAATATTTTAGGATATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATA‑A‑ATATATGCAAGCGATCAAGATAAAATGTTCAAATATA > 1:1956216/1‑128 TAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATAT‑T‑AAAGCTATCAAAATAATATGGTGAAAATTAGATa > 1:1007781/1‑127 TAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATA‑AT‑AAAGCGATAATCATAAAATGGTAAAATTTATATC > 1:5538519/1‑128 ATAAATATTTTATGAAATTAATCAAAGAAAAAACCTCAATATTATCTATAGAGTTAAT‑‑‑‑TATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAG < 2:146660/128‑1 TAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGT < 2:6622919/128‑1 TTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAGTG‑‑‑‑ATATATATATATATATATATATATATATATGAAAGCGATCATCATAAAATGGTGATATTTAGATATGAGTTTGTCTT > 1:6936015/1‑128 TTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAGATA‑A‑GCAAGCGCGCAGCATAAAATGGTGATATTTAGATCTGAGTTTGTCTTA > 2:3650057/1‑128 GGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCACGCGATCAGCATAATATGGTGATATATTGATCTGAGTTGGTATAAAAT > 2:6468355/1‑128 tAAATGAATCAAATCAAAAACCTCAATATTAACTATAGAGTTAAT‑‑‑‑TATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATT < 2:2279627/127‑1 AATGAAGAAAAGAAAAAACCTCAATATTATCTATAGAGTTAAT‑‑‑‑TATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTG < 2:4063205/128‑1 ATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATAT‑T‑AAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTGGGTCTTAAATTTGT > 1:1084556/1‑128 ATGAAGAAAATCAAAAAACTCCATATTATATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGT < 2:2464553/128‑1 AGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGTTGAAATTTATATCTGAGTTTGTCTTAAATTTTTAt > 1:5117906/1‑127 cCAAATCAATATCCTCTATAATTCCTATAGAGTTTATG‑‑ATATATAT‑T‑TATATATATATATATATATATGCTAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTT < 2:1956216/127‑1 GCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGAAATCTATCAGAATAAAATTGTGAAATTTATATCTGAGTTTGTCTTATATTTGTAGATT > 2:6263677/1‑128 AGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATA‑‑CAAGAGATCAGCATAAAATTGTTAAATTTATATCTGAGTTTGTATTAAATTTGTTGATTTTAT > 1:2495111/1‑128 aaaaatctATATTTTCTATAGAGTTAATT‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTA < 2:1133244/120‑1 aaatataataTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTAT < 2:1559812/118‑1 CATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCTATCACAAAAAAATGTTGAAATATAGATCTGAGTTGTTCTTAAATTTGTATTTTATATTTATATTTTATA > 1:6463247/1‑128 TACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAATATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAG > 2:4207498/1‑128 atCTATATAGATAATG‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGT < 1:4375778/126‑1 aCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAA < 2:93450/127‑1 CTATAGAGTTTAT‑‑‑‑TATATATATATATATATATATATATATATATGCAAGCGATCTGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAAT < 2:1705196/128‑1 CTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAAT < 1:5352409/128‑1 atagagatattgATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAA < 1:5765832/116‑1 agataatTATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGA < 2:269150/121‑1 tattTATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTT < 2:6529081/124‑1 taatTATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTT < 1:224829/124‑1 atgATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTT < 2:4988058/125‑1 ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTA < 1:2620271/128‑1 ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTAAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTA < 1:3882019/128‑1 ATATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTTTAGTTTTTATATATATTTTATAAAGATAATAATTTATATTTTTA > 1:4228091/1‑128 TATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTTAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > 2:4319973/1‑128 |||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |