New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 3111701612 (0.330)1632 (0.340) 171/252 17.8 51.5% intergenic (‑93/‑221) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 311174 = 1461 (0.300)intergenic (‑97/‑217) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1632 total aligned reads displayed.

CAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/311044‑311170
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311174‑311280
                                                                                                                                                                                                                                            
       aaTTAAAATTTTAATTAAATTTTTCATTTTAAAAACACCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAA                                                                                                      <  1:9560174/126‑1
       ACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATA                                                                                                    >  2:2138055/1‑128
         TTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATA                                                                                                    >  1:706784/1‑128
          TAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATAT                                                                                                   <  2:6862689/128‑1
           AAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATG                                                                                                  >  1:667254/1‑128
           AAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATG                                                                                                  >  2:5593084/1‑128
             AATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAA                                                                                              >  2:22646/1‑128
               TTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGAAATATGTAAATG                                                                                            >  2:8218438/1‑128
                TGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATGTATATATATATAT‑ATAATGCAATATGTATAT                                                                                             >  1:8548127/1‑128
                TGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCTATATCTTAAT                                                                                             >  1:4214161/1‑128
                  TAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGA                                                                                           >  1:1982677/1‑128
                     TTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAA                                                                                        <  2:6114464/128‑1
                     TTAACTTTTTCATTTTAAACACAACTTATTATAAAATAAAATATTTGTTACATACTATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAA                                                                                        <  2:2759545/128‑1
                      TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATAA‑AATAAAATAAATAAATTAAAAT                                                                                       >  2:4154022/1‑128
                      TAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCTATATGTAAATGAAAAT                                                                                       >  2:5425611/1‑128
                       AACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGAAATATATAAATGAAAATATG                                                                                    >  2:10198949/1‑128
                       AACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTAAATATATATATATATATAT‑ATAATTCAATATATAAATGAAAATA                                                                                      >  2:5092601/1‑128
                       AACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACAAATATAACATACATTCATTATATATATATATATATATAT‑A‑AAT‑AAATATATAAATTAAAAgttt                                                                                    >  1:2150156/1‑124
                        ACTTTTTCATTTTACACCCCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATTTAAATGAAAATAT                                                                                     >  1:8849164/1‑128
                         CTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATTCAATATATAAAATAAAATATt                                                                                    >  1:6288823/1‑127
                         CTTTTTCATTTTAAACACACATTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATAAATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATG                                                                                    <  1:3197834/128‑1
                          TTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATTAAATATATATATTAAAATAatg                                                                                   >  1:3417625/1‑125
                           TTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGT                                                                                  <  2:1256438/128‑1
                            TTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGAAATATTTAAATGAAAATATttta                                                                                 >  2:7970985/1‑124
                             TTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATTAAATATGTAAATTAAAATATGTTATAA                                                                              >  1:10197495/1‑128
                                   ttatactcacaTTATTAAAAAATAAAATAGTTGTTACATACGATTCAAATAATATATAACATAAATTAATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGC                                                                          <  1:2775756/117‑1
                                   TTACACACCCCTTATTAAAAAATAAAATACTTGTTAGATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATTCTATATGTATATTAAAATATGGTATAATAACAA                                                                        >  1:1608406/1‑128
                                   TTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCTATATGTATATGAATATATGGTAGATTAGa                                                                          >  1:4035516/1‑127
                                     ACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATTTAAATTAAAATATGGTATAATAGCAA                                                                        >  1:4873330/1‑128
                                     ACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAATGAAAATATGTTATAATAGCAACC                                                                      >  1:1373579/1‑128
                                     ACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATAAATTCATTATATATATATATATATATAT‑ATAATTAAATATTAAAAAGAAAATATTGTATAATAGCAA                                                                        >  2:4348294/1‑128
                                      CACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATAA‑AATTCAATATGTAAATTAAAATATGTTATAATAGCAAC                                                                       >  1:9777085/1‑128
                                        CACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTT                                                                   >  1:9907130/1‑128
                                          CCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATTCAATATGTAAAAGAAAATATGGTATAATAGCAACCGTTTA                                                                 >  1:5099787/1‑128
                                          CCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTaa                                                                 >  2:9850327/1‑126
                                           CCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCTTTT                                                                  >  1:4651716/1‑128
                                            aaTTATTAAAAAATAAAATAATTGTTACATAATATTAAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTA                                                                 <  1:9037972/126‑1
                                             aTTATTAATAAATAAAATAATTTTTAAATAAGATTAAAAACATATATAAAATAAATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTAT                                                                <  2:1392925/127‑1
                                               TATTAAAAAATAAAATACTTCTTACATAAGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAG                                                            <  1:782435/128‑1
                                                 TTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATTCAATATGTAAATGAAAATATTGTATAATAGCAACCGTGTATATAGTA                                                          >  1:9180763/1‑128
                                                  TAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑A‑AAT‑CAATATGTAAAATAAAATATTGTATAATAAAAAACTTATATAAAATAA                                                         >  2:1933625/1‑128
                                                   aatAAATAAAATACTTGTTAGATAAGATTCAATACATATATAATATAAATTTATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTA                                                          <  1:1772222/125‑1
                                                   AAAAAATAAAATACTGTTTACATAATAATAAAAAAATATATAAAATAAATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTA                                                          <  1:6901645/128‑1
                                                     AAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATTCAATATGTAAATGAAAATATGTTATAATATCAACCTTTTATAAATTAAA                                                        >  2:8598904/1‑128
                                                     AAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTATATGAAAATATTGTATAATAGCAACCGTTTATAAAATAAA                                                        >  2:2431822/1‑128
                                                     AAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAA                                                      <  2:7040445/128‑1
                                                     AAAATAAAATAATTGTTACATAAGATTCAAAACATATATAAAATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAA                                                        <  1:2337468/128‑1
                                                      aaaaatAATACTTTTTACATAATATTAAAAAAATATATAACATACAATCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAA                                                       <  2:7340167/122‑1
                                                       aaattAATAATTGTTAAATAATATTAAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAATAAAA                                                    <  2:3577404/123‑1
                                                       aaaAAAAAACTAGTAACATACGATTACAAAAATATATAACATACAGTCATAATATATATATATATATATAT‑ATAATGCAATATGAAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAA                                                      <  1:5936363/125‑1
                                                       AATAAAATACATGTTACATACGATTCAAAACATATATAAAATAAATTAATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAA                                                      <  2:9433944/128‑1
                                                          AAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATTAAAATATAGGATAATATAAACACTAAATAAAATAAAAAAAT                                                   >  2:3120150/1‑128
                                                           AAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑A‑AA‑GCAATATGTAAATGAAAATATGGTATAATAGCACCCGTTTATAAAGTAAAAAAAAAGT                                                >  1:10047366/1‑128
                                                           AAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑A‑AA‑GAAATATGTAAATGAAAATATTGTATAATATCACAAGTTTATAAAGTAAAAAAATAGa                                                >  2:4830681/1‑127
                                                            AATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATTCAATATGTAAATGAAAATATGTTATAATAGCAACCTTTTATAAAGTAAAAAAATAG                                                 >  1:3799247/1‑128
                                                              TACTTGTTTCATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATATCAACCTTTTATAAATTAAAAAAATAGTAAA                                             >  2:3713482/1‑128
                                                               ACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAA                                              >  1:6458074/1‑128
                                                               ACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATAT                                                                                                   <  2:9660937/75‑1
                                                                CTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAAAGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAA                                             >  2:6003487/1‑128
                                                                 TTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATTGTATAATAGAAACAGTTTATAAAGTAAAAAAATATAAAAT                                            >  2:1734606/1‑128
                                                                 TTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGTTATAATATAAAACGTTTATAAAGTAAAAAAATAGTAAAT                                            >  2:6405107/1‑128
                                                                 TTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAAT                                            >  1:3551883/1‑128
                                                                  TGTTACATAAGATTCAAAAAATATATAAAATAAATTAATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATA                                           <  1:5422570/128‑1
                                                                   tttatataatATTCAAAACATATATAAAATATATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATAC                                        <  2:7194297/118‑1
                                                                   tTTAAATACTATTCATAACATATATAACATAAAATCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAT                                          <  2:3920309/127‑1
                                                                   GTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATAT‑‑‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATATCAACATTTTATAAAGTAAAAAAATAGTAAATATACTA                                      >  2:7786777/1‑128
                                                                   GTTAAATAATATTAAAAAAATATATAACATAAATTTATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAT                                          <  1:5784520/128‑1
                                                                     TACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAA‑ATAATGCAATATTTAAATAAAAATATTGTATAATATCAAACTTTTATAAAATAAAAAAATAGTAAATAaaa                                        >  2:9231214/1‑125
                                                                       cataatATTAAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTA                                      <  1:6111866/122‑1
                                                                       CATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAAAGAAATATCTAAATGAAAATATGGTATAATAGCAAAAGTATATAAAGTAAAAAAATACTAAATATACaa                                      >  2:5769959/1‑126
                                                                         taaGATTCAAAACATATATAAAATACATTAATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACT                                    <  2:1526913/125‑1
                                                                          ACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAACAAAATAGTAAATATACTACTTAT                                 >  2:10500993/1‑128
                                                                           CGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATGAAATATGTAAATTAAAATATGGTATAATATCAACAGTTTATAAAGTATAAAAATAGTAAATATACTACTTATT                                >  1:1082313/1‑128
                                                                               TCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACAACTTATTTA                              >  1:2991300/1‑128
                                                                               TCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTA                              <  2:8853374/128‑1
                                                                               TCAAAAAATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTA                              <  1:8250782/128‑1
                                                                                 AAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACT                            <  2:9024561/128‑1
                                                                                 AAAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGAAACCGTTTATAAAGTAAAAAAATAGTAAATATACTAATTATTTAat                            >  1:8669680/1‑126
                                                                                  AAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTA                           >  1:8357945/1‑128
                                                                                  AAACATATATAACATACATTCATTATATATATATATATATATAT‑ATAAAGCAATATGTAAATGAAAATATTTTATAATAGCAACCGTTTATAAATTAAAAAAATAAAAAATATACTACTAATTaaaaa                           >  1:8075744/1‑123
                                                                                    ACATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCTATATGTAAATTAAAATATGTTATAATAGCAACCGTTTATAAATTAAAAAAATATTAAATATACTTCTAATTTACTAAT                         >  1:5231805/1‑128
                                                                                    ACATATATAACATACATTCATTATATATATATATATATATAT‑ATAAGTCAATATGTAAATGAAAATATGTTATAATAGCACCCTTATATAAAGTAAAAAAATAGTAAATATACTACTTATTTAATAAT                         >  2:7600729/1‑128
                                                                                      ATATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAA                       >  2:10060164/1‑128
                                                                                      ATATATAACATACATTCATTATATATATATATATATATAT‑‑‑AATTAAATATGTAAATGAAAATATTTTATAATAGAAACATTTTATAAAGTAAAAAAATAATAAATATACTAATAATTTACTAATAAAA                     >  2:8448857/1‑128
                                                                                        ATATAACATACATTCATTATATATATATATATATATAT‑ATAATTCAAAATTTAAATTAAAATATTTTATAATAACAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTAATAATAAta                     >  2:6598484/1‑126
                                                                                        ATATAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAATTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAA                     >  1:10332774/1‑128
                                                                                           TAACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATATACTAATAAAATCT                  >  2:2980390/1‑128
                                                                                           TAACATACATTCATTATATATATATATATATATAT‑ATAATGAAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAATTATAAAAATAGTATATATAATACTTATTTACTAATAAAATCT                  >  2:3396475/1‑128
                                                                                             aaATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAT                <  1:5623302/126‑1
                                                                                             ACATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAT                <  2:10362570/128‑1
                                                                                              CATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTA                                  >  1:7221235/1‑109
                                                                                              CATAAATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATT               <  2:2610849/128‑1
                                                                                               ATACATTTATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTT              <  1:4441179/128‑1
                                                                                               ATACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATAAACTACTTATTTAATAATAAAATCTATTT              >  1:2578349/1‑128
                                                                                                TACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGTTATAATATCAACCGTTTATAAAGTAAAAATATAGTAAATATAATACTTATTTACTAATAAAATCTATTTT             >  2:5271137/1‑128
                                                                                                TACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATATAAACCTTTTATAAATTAAAAAAATAGTAAATATACTAAATATATACTAATAAAATCTATTTT             >  1:7662944/1‑128
                                                                                                TACATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGAAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTT             >  2:6286411/1‑128
                                                                                                 atATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTT            <  1:9362387/126‑1
                                                                                                  CATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTA           >  1:7470537/1‑128
                                                                                                  CATTCATTATATATATATATATATATAT‑ATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATAAAATAATTATATACTAATAAAATCTATTTTTA           >  2:4527802/1‑128
                                                                                                                                                                                                                                            
CAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATAT‑A‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/311044‑311170
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311174‑311280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.