BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 311170	1612 (0.330)	1632 (0.340)	171/252	17.8	51.5%	intergenic (‑93/‑221)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
*	?	CP016816	311174 =	1461 (0.300)	1632 (0.340)	171/252	17.8	51.5%	intergenic (‑97/‑217)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 3212 total aligned reads displayed.

CCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAATTAT  >  CP016816/311043‑311297

 aaaaTTAACTTAAAATTGTATTTATAATTTTAATATTAAACACACCATATTAAAAAATAAAATACTTTTTACATACTATTCAAAAAATATATATCATACATTAAT‑‑tatatatatatatatatatatat                                                                                                                                <  1:6243656/127‑1 (MQ=255)

  aaattaaattAAAATTGTTATTAACTTTTTATTTTTACACACCACTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatata                                                                                                                               <  1:3114678/128‑1 (MQ=255)

  aaaTTAACTTAAAAATGTAAATAAATTTTTCATTTTAAACACAACTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatata                                                                                                                               <  1:719413/128‑1 (MQ=255)

    aTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataat                                                                                                                             >  1:1767105/1‑126 (MQ=255)

     tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATaa                                                                                                                            >  2:2721511/1‑128 (MQ=255)

     tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTAAAAACAGAAATAACATACATTCAT‑‑tatataaataataaaaaatatatatta                                                                                                                            >  2:6580504/1‑126 (MQ=255)

         cTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataatgcaat                                                                                                                        >  2:736225/1‑121 (MQ=255)

           tAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataattcaatat                                                                                                                      >  2:4746516/1‑119 (MQ=255)

             aaattttttttAAATTTTTTATTTTACACACAAATTATTAAAAAATAAAATAATTGTTAAATAATATTAAAAACATATATAACATAAATTGAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGt                                                                                                                  <  1:10447757/119‑1 (MQ=255)

             aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑AA‑GCAATATGt                                                                                                                  >  2:1602372/1‑128 (MQ=255)

              aaTTTTAATTAAATATTTAATTTTTCACACACATTATTATAAAATAAAATATTTGTTATATAATATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTa                                                                                                                 <  2:6124857/128‑1 (MQ=255)

                ttGTAATTATATTTTAATTTTTTATCACCCTTTATTAAAAAAAAAAATAGATGTTACATAAGATTCAAAAAATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTaaa                                                                                                               <  1:4664730/128‑1 (MQ=255)

                 tGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑AA‑GAAATATGTAAAt                                                                                                              >  2:9058486/1‑128 (MQ=255)

                 tGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATAT‑T‑ATTCAATATATAAAt                                                                                                              >  2:3237663/1‑128 (MQ=255)

                 tGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAAt                                                                                                              >  1:4097142/1‑128 (MQ=255)

                        aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATTaaaa                                                                                                         >  2:8474182/1‑128 (MQ=255)

                        aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATACAATATTTAaaaaaaaa                                                                                                         >  1:10022038/1‑128 (MQ=255)

                         aCTTTTTCATTTTACACCCCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATTTAAATGAAAatat                                                                                                      >  1:8849164/1‑128 (MQ=255)

                            ttttAATTTTACACACCACTTATTAAAAAATAAAATAATTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGtat                                                                                                 <  1:6651480/128‑1 (MQ=255)

                              ttCAATTTAAATACACATTATTATAAAAAAAAATACTTTTTAAATACTTATAAAAATATATATAAAATACATTCAT‑‑TA‑A‑ATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGtat                                                                                                 <  1:9773727/128‑1 (MQ=255)

                               tCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATAATTCAATATGTAAAAGAAAATATTTTATAATAg                                                                                            >  2:4271362/1‑128 (MQ=255)

                                  ttttACACACAACTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTataata                                                                                             <  2:9624718/128‑1 (MQ=255)

                                   tttAGACACTACTTATTAAAAAATAAAATAATTTTTAAATAAGATTTAAAAAATATATAATATTCATTCTTTATATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGtata                                                                                                <  1:4455559/128‑1 (MQ=255)

                                   tttACACACCCCTTATTAAAAAATAAAATACTTGTTAAATACGATTCAAAACATATATAACATACATT‑AT‑‑T‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCa                                                                                          <  1:1094630/128‑1 (MQ=255)

                                   tttAAACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAg                                                                                            <  1:5602295/128‑1 (MQ=255)

                                     aacaaacCACTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAg                                                                                            <  1:8988880/127‑1 (MQ=255)

                                      acacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATTCAATATATAAAAGAAAATATTTTATAATAGCAAca                                                                                       >  2:6272137/1‑127 (MQ=255)

                                        acacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAAAATGCAATATGTAAATGAAAATATGGTATAATAGCaa                                                                                         >  1:7372795/1‑128 (MQ=255)

                                           ccccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATTGATTAATATACACCGtt                                                                                    >  2:5578964/1‑128 (MQ=255)

                                            aacatattaAAAAATATAATTCTTGTTAGATACGATTCAAAACATATATAACATACATTTAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGttt                                                                                   <  2:4447874/124‑1 (MQ=255)

                                               ttattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTAAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                                  <  2:9395360/128‑1 (MQ=255)

                                               gtattaAAAAATAAAATACTTGTTAAATACTATTCAAAACATATATAAAATACATTCAT‑‑TATATATATAGATATAAATATA‑ATAAT‑CAATATAAAAATAAATATAAGTTATAATAGAAACCGTCtata                                                                                >  1:6840012/2‑128 (MQ=255)

                                                     aaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                                            <  2:8206436/128‑1 (MQ=255)

                                                     aaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATA‑ATTA‑‑‑AAAATATATATTAAAATATTGTATAATAGCAACCGATTATAAATTaaaa                                                                        >  1:5080631/1‑128 (MQ=255)

                                                      aaaatataatAATTTTTATATAAGATTATAAAAATATATAAAATAAATTTAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaa                                                                         <  1:2741500/128‑1 (MQ=255)

                                                        aataaaataCTTTTTACATACGATTAAAAAAATATATATCATAAATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                                       <  2:5174487/128‑1 (MQ=255)

                                                        aataaaataCTTGTTACATACTATTAAAAACATATATAACATACATTAAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaaa                                                                     <  1:8682775/128‑1 (MQ=255)

                                                        aaaaaaaaaCTAGTAACATACGATTACAAAAATATATAACATACAGTCA‑‑‑TA‑ATATATATATATATATATATATAATGCAATATGAAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                                       <  1:5936363/125‑1 (MQ=255)

                                                                aattGTTACATATGATTCAAAACATATATAACATAAATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAat                                                             <  1:3451879/126‑1 (MQ=255)

                                                                 cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatata                                                                                                                               <  2:1389395/65‑1 (MQ=255)

                                                                 cTTGTTACATACGATTAAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                                            <  1:9914697/128‑1 (MQ=255)

                                                                  ttGTTACATACTATTCAAAAAATATATAACATAATTTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                                           <  1:9578758/128‑1 (MQ=255)

                                                                  ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATCGCAACCGTTTATAATGAAAAAAAATAGTAAat                                                             >  1:6425813/1‑128 (MQ=255)

                                                                  ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATATAAAACGTTTATAAAGTAAAAAAATAGTAAat                                                             >  2:6405107/1‑128 (MQ=255)

                                                                  ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATTGTATAATAGCAACATTTTATAAATTAAAAAAATATTAAat                                                             >  2:6819438/1‑128 (MQ=255)

                                                                   ttttagataataTTTAAAAAATATATAATATAAATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                                            <  1:7627193/117‑1 (MQ=255)

                                                                   tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATTCAATATGTAAATGAAAATATTGTATAATATCAACCTTTTATAAAGTAAAAAAATAGTAAAtata                                                          >  2:10082554/1‑128 (MQ=255)

                                                                    gTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGAAATATATAATTGAAAATATTGTATAATAGCACCCGTATATAAATTAAAAAAATAGTAAatat                                                           >  1:5750365/1‑128 (MQ=255)

                                                                    gTTACATAAGATTCAAAACATATATATCATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                                           <  2:3037101/128‑1 (MQ=255)

                                                                      tACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATA‑A‑ATAATGCAATATTTAAATAAAAATATTGTATAATATCAAACTTTTATAAAATAAAAAAATAGTAAataaaa                                                         >  2:9231214/1‑125 (MQ=255)

                                                                        taaactaTTAAAAAAATATATAAAATATAATATT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtac                                                         <  1:1959485/122‑1 (MQ=255)

                                                                        cATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATA‑A‑AATTCAATATATAAATGAAAATATTGTATAATATAAACATTTTATAAAGAATAAAAATATTAAATAtacta                                                       >  2:2167560/1‑128 (MQ=255)

                                                                        cATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATATCAAACGTTTATAAAGTAAAAAAATAGTAAATAtacta                                                       >  2:2524000/1‑128 (MQ=255)

                                                                         aTACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAATTAAAAAAATAGTAAATAtactac                                                      >  1:489116/1‑128 (MQ=255)

                                                                          taataTTCAAAACATATATAACATACATTTAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATactact                                                     <  1:3604272/124‑1 (MQ=255)

                                                                             taTTCAAAAAATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAt                                                  <  2:4018124/127‑1 (MQ=255)

                                                                                tCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTa                                               <  1:1607833/128‑1 (MQ=255)

                                                                                   aaaaATATATAAAATAAATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACta                                            <  1:7782327/128‑1 (MQ=255)

                                                                                    aaCATATATAACATAAATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                                           <  1:8528108/128‑1 (MQ=255)

                                                                                     aCATATATAACATACATTCAT‑‑TATATATATATATATATATATAT‑T‑ATGCAATATGTAAATTAAAATATTGTATAATAGCAACAGTTTATATAGATAAATAATAGTATATATAATACATATTAACtaat                                          >  1:6104289/1‑128 (MQ=255)

                                                                                     aCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCTATATGTAAATTAAAATATGTTATAATAGCAACCGTTTATAAATTAAAAAAATATTAAATATACTTCTAATTTACtaat                                          >  1:5231805/1‑128 (MQ=255)

                                                                                      tatatatAAAATAAATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaata                                         <  1:10228156/127‑1 (MQ=255)

                                                                                       atatatAACATACATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                                        <  2:1043756/128‑1 (MQ=255)

                                                                                        tatataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATTTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTAAAAATaaa                                       >  1:705864/1‑128 (MQ=255)

                                                                                        tatataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATATCAACATTTTATAAAGTAAAAAAATAGTAAATATAATAATTATTTACTAATaaa                                       >  2:3631716/1‑128 (MQ=255)

                                                                                        tatataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATATAATAATTATTAACTAATaaa                                       >  2:2844246/1‑128 (MQ=255)

                                                                                         atataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATTAAAATATGTTATAATAGCAACAGTTTATAAATTAAAAAAATATTAAATATACTAATTATTTACTAATaaaa                                      >  1:928497/1‑128 (MQ=255)

                                                                                           ataACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACATTTTATAAATAAAAAAAATAGTAAATAAACTACTTATTTACTAATaaaa                                      >  2:497817/1‑128 (MQ=39)

                                                                                            taACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                                   <  2:8867804/128‑1 (MQ=255)

                                                                                             aaCATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGAAACAGTTTAAAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAAta                                    >  2:5772167/1‑127 (MQ=255)

                                                                                                atacatTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGAAACAGTTTATAAATAAAAAATATAGTAAATATACTAATTTTTTAATAATAAAATCTAt                                 >  1:2187001/1‑128 (MQ=38)

                                                                                                atacatTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGATATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATATAATAATTATTTACTAATAAAATCTAt                                 >  1:9124070/1‑128 (MQ=39)

                                                                                                     ttcat‑‑tATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTTTATAATAGCAACAGTATATAAAGTAAAAAAATAGTAAATATACTACTAATTTACTAATAAAATCTATTttta                            >  1:3834210/1‑128 (MQ=39)

                                                                                                        attatttatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttat                           <  1:3296711/122‑1 (MQ=255)

                                                                                                        attaataatatatatatatatatatatataATGCAATATTTAAATGAAAATATTGTATAATATCAAACGTTTATAAATTAAAAAAAAAGTAAATATACTACTTATTTACTAATAAAATCTATTtttat                           <  2:7707223/121‑1 (MQ=255)

                                                                                                           cattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATATCAACCGTTTATAAAGTAAAAAAATAGTATATATACTACTTATTTACTAATAAAATCTATTtttattta                        >  2:5940440/4‑128 (MQ=255)

                                                                                                           cattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATAAAACTTATATACTAATAAAATCTATTtttattta                        >  1:1343662/4‑128 (MQ=255)

                                                                                                             ttatatatatatatatatatatataATGCAATATGTATATGAAAATATGGGATAATAGCAACCGTTTATAAAGTAAAAAATTAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaa                      <  1:8198506/127‑1 (MQ=255)

                                                                                                              tatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTAATAATAAAATCTATTTTTATTTaaaa                     >  2:3464948/1‑128 (MQ=255)

                                                                                                               atatatatatatatatatatataATGAAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGAAAATATAATAATTATTTAATAAAAAAATCTATTTTTATTaaaaaa                    >  1:2388982/1‑128 (MQ=255)

                                                                                                                tatatatatatatatatatataATGCAATATGTAAATGAAAATATGTTATAATATAAACAGTTTATAAATTAAAAAAATATTAAATATAATACTTATTTAATAATAAAATATATTTATATATaaaata                   >  2:7966093/1‑126 (MQ=255)

                                                                                                                 atatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAg                  <  2:3766207/128‑1 (MQ=255)

                                                                                                                 atatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAg                  <  2:9806570/128‑1 (MQ=255)

                                                                                                                  tatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGt                 <  1:2543645/128‑1 (MQ=255)

                                                                                                                  tatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTAATAATAAAATCTATTTTTATTTaaaaaatt                 >  1:2935867/1‑126 (MQ=255)

                                                                                                                   atatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATATCAACAGTTTATAAAGTAAAAAAATAGAAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAATTa                >  2:8655257/1‑128 (MQ=255)

                                                                                                                    tatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATATCAAGCGTTTATATAGTAAAAATATATTATATATAATAATTATTTACTAATAAAATCTATTTTTATATAAAAAATTaa               >  2:1821688/1‑128 (MQ=255)

                                                                                                                    tatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTaa               <  2:7567335/128‑1 (MQ=255)

                                                                                                                     atatatatatatatataATTCAATATGTAAATGAAAATATGTTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATAAAAATTATTTAATAATAAAATCTATTTTTATTTAAAAAATTAAt              >  1:9428216/1‑128 (MQ=255)

                                                                                                                       atatatatatatatatTGCAATATGTAAATGAAAATATGGTATAATAGCCACCGGTTATAAAGTAAAAAAATAGTAAATATAATAATTATTTAATAATAAAATCTATATTTATTTATAAAAGTAAttt            >  2:5395744/1‑128 (MQ=255)

                                                                                                                       atatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAttt            <  2:10256389/128‑1 (MQ=255)

                                                                                                                         atatatatatataATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGa          <  2:2393283/128‑1 (MQ=255)

                                                                                                                         atatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAAAAGTTTATAAAGTAAAAAAATAGTAAATATACTAATTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGa          >  2:7201799/1‑128 (MQ=255)

                                                                                                                          tatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAATTAATTTGaa         >  2:122401/1‑128 (MQ=255)

                                                                                                                            tatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGaaaa       <  1:7982824/128‑1 (MQ=255)

                                                                                                                             atatatataATGCAATATGTAACTGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGaaaaa      <  2:1998072/128‑1 (MQ=255)

                                                                                                                             atatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGaaaaa      <  1:542472/128‑1 (MQ=255)

                                                                                                                              tatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAat     <  1:8349121/128‑1 (MQ=255)

                                                                                                                               atatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAatt    <  2:7033752/128‑1 (MQ=255)

                                                                                                                               atatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAatt    <  1:4304556/128‑1 (MQ=255)

CCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAATTAT  >  CP016816/311043‑311297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.