New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 3111701612 (0.330)1632 (0.340) 171/252 17.8 51.5% intergenic (‑93/‑221) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 311174 = 1461 (0.300)intergenic (‑97/‑217) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 2981 total aligned reads displayed.

ATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAATTATTAAA  >  CP016816/311047‑311301
                                                                                                                                 |                                                                                                                               
 tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTAAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATTTaa                                                                                                                                >  1:7354923/1‑128 (MQ=255)
    aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATaaata                                                                                                                             >  1:4252737/1‑125 (MQ=255)
     cTTAAAATTTTAATAAACTTTTTCATTTTACACACCCCTAATTAAAAAATAAAATAATTTTTACATACGATTCAAAACATATATAACATACAATCAT‑‑TATATATATATATATATATATATATAATGCa                                                                                                                            <  2:6825247/128‑1 (MQ=39)
       tAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAatat                                                                                                                        <  1:9397977/128‑1 (MQ=255)
         aaaTTTTAAATTACTTTTTCATTTTACACACAACTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTAAT‑‑TATATATATATATATATATATATATAATGCAatat                                                                                                                        <  1:9575520/128‑1 (MQ=38)
         aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑AAT‑CAATATGt                                                                                                                      >  1:1086755/1‑128 (MQ=255)
            ttGTATTTAACATTTTCATTTTAAACACCCCTTATAATAAAATAATATACTTGTTACATAAGATTCTAAACATATATAACTTACATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTaaa                                                                                                                   <  1:717157/128‑1 (MQ=255)
              gTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTTTTACATACGATTAAAAACATATATAACATACATTCAT‑‑TATATATAT‑T‑TATATATATATATAATGAAATATATAAATg                                                                                                                 >  1:7755813/1‑128 (MQ=255)
                   tAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGAAATATGTAAATTaaa                                                                                                              >  2:2401444/1‑128 (MQ=255)
                    aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATACAATATTTAaaaaaaaa                                                                                                             >  1:10022038/1‑128 (MQ=255)
                    aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATGAAAata                                                                                                           >  2:8250782/1‑128 (MQ=255)
                      attattaaTTTTAAACACCCCTTATTATAAAATAAAATACTTGTTAAATACGATTCAAAACATATATAAAATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGt                                                                                                       <  1:5187348/121‑1 (MQ=255)
                       tttaataTTTTACACACACCTTATTAAAAAATATAATTATTTTTAAAAACTATTCAAAAAATATATAAAATATATTAAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAatat                                                                                                          <  1:10219666/122‑1 (MQ=25)
                          ttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGaa                                                                                                               >  1:5404698/1‑118 (MQ=255)
                                 tACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGTTTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAgaa                                                                                              >  1:3074340/1‑126 (MQ=255)
                                   cacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑AA‑GAAATATGTAAATGAAAATATTTTATAATAGCAAc                                                                                            >  1:8175354/1‑128 (MQ=255)
                                     cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATA‑‑‑ATA‑‑‑CAATATGTAAATTAAAATATGGTATAATAGCAACCATTta                                                                                      >  1:3583312/1‑128 (MQ=255)
                                     cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATGAAAATATTTTataatataaaacg                                                                                          >  2:8879348/1‑121 (MQ=255)
                                      acCTCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTAAAATAGAAACCtttt                                                                                       >  2:1592756/1‑128 (MQ=255)
                                      acCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGt                                                                                         <  1:8664858/128‑1 (MQ=255)
                                       ccccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATA‑A‑AATTCAATATTTAAATTAAAATATGTTAAAATAGAAACCGta                                                                                        >  1:1615156/1‑127 (MQ=255)
                                       caacatattatAAAAAAAAATAGTTTTTACATACGATTCAAAAAATATATAACATAAATTAAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCg                                                                                          <  1:1983339/123‑1 (MQ=38)
                                       caaattattaAAAAATAAAATACTTTTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                                      <  2:1216684/124‑1 (MQ=255)
                                        cacTTATTAAAAAATAAAATACTTTTTACATAAGATTCAAAACATATATAACATAAATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                                                     <  2:6275518/126‑1 (MQ=255)
                                          attattaAAAAATAAAATACTTTTTACATACGATTAAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                                                     <  2:5619278/127‑1 (MQ=255)
                                            tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATTTGGTATAATATCAACAGttaaaaa                                                                                   >  1:6599797/1‑123 (MQ=255)
                                            tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCTTATATaa                                                                                   >  2:94152/1‑128 (MQ=255)
                                              ttaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGCAACCTTTTATAAAg                                                                                 >  2:3039116/1‑128 (MQ=255)
                                              ttaAAAAATAAAATAATTGTTACATACGATTCAAAAAATATATAACATAGATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAg                                                                                 <  1:6383506/128‑1 (MQ=255)
                                                 aaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACAAACAATCAT‑‑TATATATATATAAATATATAAATA‑AAT‑AAATATAAAAAAAAAAAAATAATATAATATCAAACTATTATaaaaaaa                                                                              >  1:9771099/1‑124 (MQ=255)
                                                  aaaataaaatACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                                           <  2:7040445/128‑1 (MQ=255)
                                                   aaataaaaaaATTTTTAAATAATATTAAAAACATATATAAAATAAAATTAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaa                                                                            <  1:45835/128‑1 (MQ=255)
                                                    aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATGTTATAATAGAAACCGTTTATAAAGTaaaaa                                                                           >  2:7353718/1‑128 (MQ=255)
                                                      taaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATA‑ATTA‑‑‑AATATGTAAATGAAAATATGGTATAATAGAAACCGTTTATTAAGTAAAAAAAtt                                                                       >  1:4839451/1‑127 (MQ=255)
                                                      taaaataCTTGTTACATAAGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaa                                                                             <  2:136682/128‑1 (MQ=255)
                                                        aaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATA‑‑‑AA‑GAAATATGTAAATGAAAATATTGTATAATATCACAAGTTTATAAAGTAAAAAAATAga                                                                     >  2:4830681/1‑127 (MQ=255)
                                                         aataCTTGTTACATAAGATTCAAAAAATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAg                                                                      <  1:7592514/128‑1 (MQ=255)
                                                            aCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTATATAATATCAACCGTTTATAAAGTAAAAAAATAGTaa                                                                   >  2:2847710/1‑128 (MQ=255)
                                                             cTTGATACATAAGATTAAAAACATATATAACATACATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaaa                                                                  <  2:4323161/128‑1 (MQ=255)
                                                               tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATTCAATATATAAATTAAAATATGTTATAATATCAACCTTTTATAAATTAAAAAAATATTaaa                                                                  >  1:8343601/1‑128 (MQ=38)
                                                               tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATA‑AT‑TA‑‑‑‑AATATTTAAATAAAAATATATTATAATAGAAAAAGTTTATATAATATAATAATATAAAAaataat                                                            >  1:8964284/1‑126 (MQ=255)
                                                                tttatataataTTCAAAACATATATAAAATATATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtac                                                             <  2:7194297/118‑1 (MQ=255)
                                                                 ttaaataataTTCAAAAAATATATAACATACATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAtata                                                              <  2:5035224/119‑1 (MQ=255)
                                                                 ttACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATGAAAATATGATATAATAGCAACAGTTTATAAAGTAAAAAAATAATAAAtata                                                              >  1:6060034/1‑128 (MQ=255)
                                                                  tACATACTATTAAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                                               <  1:5886772/128‑1 (MQ=255)
                                                                  tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtacta                                                           >  1:10421532/1‑128 (MQ=255)
                                                                    cATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATA‑A‑AAAGCAATATGTAAATGAAAATATGATATAAAAGCAACAGTTTATAAAAAAAAAAAATATTaaaaaaaata                                                           >  2:7994124/1‑121 (MQ=255)
                                                                     ataataTTCAAAACATATATAAAATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtactac                                                          <  2:4063516/123‑1 (MQ=255)
                                                                     aTACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAAAGAAAATATGGTATAATATCAACCGTTTATAAAGAAAAAAAATATTAAATAtactaa                                                          >  1:9896042/1‑127 (MQ=255)
                                                                        agattataaaaATATATATAATAAATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGATAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATactact                                                         <  2:1820869/121‑1 (MQ=38)
                                                                          aatatataCATATATATCTAAGATACAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                                                       <  1:6797671/121‑1 (MQ=38)
                                                                          aTTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATTCAATATGTAAATGAAAATATGGTATAATAGCAAACTTTTATAAAGTAAAAAAATAGTAAATATAATACTTa                                                       >  1:9108466/1‑128 (MQ=255)
                                                                              aaatCATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                                               <  1:850880/128‑1 (MQ=255)
                                                                               aaaCATATATAACATAAATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACta                                                <  2:9817978/128‑1 (MQ=255)
                                                                                taaatatatAACAAACATT‑AT‑‑T‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                                               <  1:5564120/125‑1 (MQ=255)
                                                                                 aCATATATAACATACATTC‑T‑‑T‑TATATATATATATATATATATATAATGCAATATTTAAATTAAAATATTGTATAATATCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                                              <  2:3474600/128‑1 (MQ=255)
                                                                                 aCATATATAACATACATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                                              <  2:8478965/128‑1 (MQ=255)
                                                                                   atatatAACATACATTCAT‑‑TATATATATATATATATATATATATAATTAAATATGTAAATGAAAATATGGTATAATATCAACCGTATAAAAAGTAAAAAAATATTAAATATACTACTTATATACtaat                                              >  2:3636113/1‑128 (MQ=38)
                                                                                    tatataACATACATTCAT‑‑TATATATATATATATATATATATATAATGAAATATTTAAATTAAAATATGTTATAATATCAACCGTATATAAATTAAAAAAATAGTAAATATACAAATTATTTAataata                                             >  1:2389347/1‑128 (MQ=37)
                                                                                     atataACATACATTCAT‑‑TATATATATATATATATATATATA‑AAT‑AAATATGTAAATGAAAATATTTTATAATATAAAAATTTTATAAATAAAAAAAATATTAAATATAATAATTATTTAATAATaaaa                                          >  2:2562278/1‑128 (MQ=255)
                                                                                     atataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATATAGTAAAAAAATAGTAAATATAATACTTATTTACTAATaaaa                                          >  2:1005602/1‑128 (MQ=255)
                                                                                     atataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaaa                                          >  2:5424081/1‑128 (MQ=255)
                                                                                       ataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATc                                        >  2:2174057/1‑128 (MQ=255)
                                                                                         aaCATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATTAAAATATGTTATAATAGAAAACTTTTATAAAGTAAAAAAATAGAAAATATACTACTTATTAACTAATAAAATCTa                                      >  2:6425460/1‑128 (MQ=255)
                                                                                          acatacatTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt                                     >  2:9251863/1‑128 (MQ=255)
                                                                                          acatacatTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt                                     <  2:2726282/128‑1 (MQ=255)
                                                                                            catatctatatatatatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                                       <  1:2913413/116‑1 (MQ=255)
                                                                                            atacatTCAT‑‑‑‑TATATATATATATATATATATATAATGCTATATGTAAATGAAAATATTTTATAATATAAAAATTTTATAAAGTAAAAAAATAATAAATATAATACTTATTTACTAATAAAatatatat                                   >  2:5824324/1‑126 (MQ=255)
                                                                                            atacatTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt                                   >  1:7970065/1‑128 (MQ=255)
                                                                                             tacatTCATTATATATATATATATATATATATATATAATAAAATATGAAAATGAAAATATTGTATAATAGAAAAATTTTATAAATTATAAAAATAATAAATATAATAATTATATAATAATAAAATCTa                                      >  1:5038703/1‑128 (MQ=255)
                                                                                                acatacattcattatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt                                   >  1:3433931/13‑128 (MQ=255)
                                                                                                   cattcattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATAAAATAATTATATACTAATAAAATCTATTttta                                >  2:4527802/8‑128 (MQ=38)
                                                                                                     cattcattatatatatatatatatatataATGCAATATGTAAATGAAAATATTATATAATATAAACATTTTATAAATTAAAAAAATAGTAAATATAATAGATATTTACTAATAAAATATATTtttatt                              >  2:1976882/8‑128 (MQ=255)
                                                                                                      tcattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttattt                             <  2:9659579/124‑1 (MQ=255)
                                                                                                      tatatatatatatatatatatatatatataTAAATATAT‑AAT‑AAAATATTTAATAAAATAAACAGTTTATAAAAAAAAAAATTATAATATATAAAATTTTTATAAAAATAAAATATATATTTATTTaa                           >  1:6205666/3‑128 (MQ=255)
                                                                                                       cattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATAAAACTTATATACTAATAAAATCTATTtttattta                            >  1:1343662/4‑128 (MQ=255)
                                                                                                        catattgcattatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaa                           >  1:3774601/11‑128 (MQ=255)
                                                                                                         cattatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTAATTATTTACTAATAAAATCTATTATTATTTaaa                          >  1:2736431/4‑128 (MQ=255)
                                                                                                         atatatatatatatatatatatataATGCAATATGTAAATGAATATATTTTATAATAGAAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaa                          >  2:10221881/1‑128 (MQ=255)
                                                                                                          tatatatatatatatatatatataATGCAATATGTAAATGAAAATATGTTATAATAGCAACCTTTTATAAATTAAAAAAATAATAAATAAACTACTTATTTACTAATAAAATATATATTTATTTaaaa                         >  1:570314/1‑128 (MQ=255)
                                                                                                             atatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAg                      <  1:9278756/128‑1 (MQ=255)
                                                                                                             atatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAg                      <  2:5964174/128‑1 (MQ=255)
                                                                                                             atatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAg                      <  2:3766207/128‑1 (MQ=255)
                                                                                                             atatatatatatatatatataATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAg                      <  2:6155347/128‑1 (MQ=255)
                                                                                                              tatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGt                     <  1:2543645/128‑1 (MQ=255)
                                                                                                               atatatatatatatatataATGCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTa                    <  2:7576131/128‑1 (MQ=255)
                                                                                                                tatatatatatatatataATTCAATATGTAAATTAAAATATTTTATAATATCAAACTTTTATAAAGTAAAAAAATAGTAAATATAATAATTATTTAATAATAAAATATATTTTAATTTAAAAAATTaa                   >  1:7009726/1‑128 (MQ=255)
                                                                                                                tatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTaa                   >  2:10405189/1‑128 (MQ=255)
                                                                                                                tatatatatatatatataATGAAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTaa                   <  2:6610081/128‑1 (MQ=255)
                                                                                                                 atatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAt                  >  1:3261501/1‑128 (MQ=255)
                                                                                                                 atatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATCTATTTTTATATAAAAAAGTAAt                  >  1:4007146/1‑128 (MQ=255)
                                                                                                                  tatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCACCCGTTTATAAAGTAAAAAAATAGAAAATAAACTAGATATTTACTAATAAAATATTTTTTTATATAAAAATATAAtt                 >  1:2191150/1‑128 (MQ=255)
                                                                                                                   atatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAATTAAAAAAATAGTAAATATACTACTTATATACTAATAAAATCTATTTTTATTTAAAAAAGTAAttt                >  1:8820481/1‑128 (MQ=255)
                                                                                                                   atatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAttt                <  2:3247016/128‑1 (MQ=255)
                                                                                                                    tatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAATAAGTAAtttt               >  2:8664419/1‑127 (MQ=255)
                                                                                                                     atatatatatataATGCAATATGTAAATGAAAATATGGTATAATACCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGa              <  2:9064036/128‑1 (MQ=255)
                                                                                                                        tatatatataATTCTATATGTAAATGAAAATATGGTATAATAGCAAACGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGaaaa           <  1:4421203/128‑1 (MQ=255)
                                                                                                                           atatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAatt        <  2:7742254/128‑1 (MQ=255)
                                                                                                                           atatataATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAatt        <  1:1794775/128‑1 (MQ=255)
                                                                                                                             atataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAattat      <  2:5207159/128‑1 (MQ=255)
                                                                                                                                 |                                                                                                                               
ATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAATTATTAAA  >  CP016816/311047‑311301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.