New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP016816 | 437885 = | 1568 (0.610) | 169 (0.080) | 90/204 | 18.0 | 12.2% | intergenic (‑189/+233) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
? | CP016816 | = 437880 | 1174 (0.570) | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
Only 100 of 1660 total aligned reads displayed.
ATGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437752‑438007 | tGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑g > 2:4595103/1‑128 (MQ=255) tGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑g > 2:159670/1‑128 (MQ=255) tGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑g > 2:1449471/1‑128 (MQ=255) aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑at > 2:750463/1‑128 (MQ=255) aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑at > 2:700319/1‑128 (MQ=255) aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTT‑AAT‑‑G‑‑‑‑at > 1:3807644/1‑128 (MQ=255) aaCTTATTTTTGTAGTTGTAAGTTTCATTTATAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAAGAAAAGCAAAAACCTCCATATTACCTATATAGTT‑AAT‑‑G‑‑‑‑ata > 1:1654782/1‑128 (MQ=255) ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAATCAAAGCAAAATCCTCCATATTACCGATAGAGTT‑AAT‑‑G‑‑‑‑atatat > 1:3869572/1‑128 (MQ=255) tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAATCCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatata > 2:3910256/1‑128 (MQ=255) aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGAT‑AAT‑‑G‑‑‑‑atatatat > 1:4935971/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAGAGAGTAGATATAAAAATTGTATTGTTAAAATAAATATTTTAGTCAATTCAGCTAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatata > 1:2872123/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACATATAGAGTT‑AAT‑‑G‑‑‑‑atatatata > 1:3184425/1‑128 (MQ=255) ctacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatat > 2:2979204/10‑128 (MQ=255) gTATTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAAACTCCATATAACCTATAGAGAT‑AAT‑‑G‑‑‑‑atatatatatatat < 1:4626753/128‑1 (MQ=255) gTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatat < 2:2870294/128‑1 (MQ=255) aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatat > 2:207586/1‑128 (MQ=255) gTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAATCAAAAACCTCCATATTACATATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatata < 2:3709849/128‑1 (MQ=255) gTAAGTTTCATTTTTAATAATTATTAGATATAAAAATTGTATTTTTAAAATATATATTTTATTTAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatat < 1:1812191/128‑1 (MQ=255) gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTATAAAATAAAAATTTTAGTAAATGAAGCAAATCAAAAACCTCCATATTACATATAGATTT‑AAT‑‑A‑‑‑‑atatatatatatatatatat > 1:4315821/1‑128 (MQ=255) tAAGTTTCATTTATAATAAATATTAGAAATAATAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATACAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatata > 1:4863130/1‑128 (MQ=255) aGTTTCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑TAT‑‑G‑‑‑‑atatatatatatatatatatata < 2:1680785/128‑1 (MQ=255) gTTTCATTTTTAATAAATATTAGATATAAAAATTTTATTTTTAAAATATATATTTTAGTAAAAGAATAAAACAAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatatatat < 2:2209587/128‑1 (MQ=255) tttAATTTTTTATAAATATTATAAATAAAAAATTTTTTTTTAAAATAAATATTTTATGAAATTAATAACATCAAAAACCTCCATATTACATATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatatatata < 2:1389730/128‑1 (MQ=255) tttAATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatatatata < 2:4131377/128‑1 (MQ=255) tCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatatatatata < 1:1722536/128‑1 (MQ=255) tCATTTTTAATAAATATTAGAAATAAAAAATGTATTTTTAAAATAAATATTTTAGTAAATGAATAAAAGCAAAAACATCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatatatatata < 1:5381622/128‑1 (MQ=255) tttttttAATATATATTATATATAAAAATTTTTTTTTTAAAATATATATTTTTTTAATTTTATCAAAGAAAAAAACTATATATTAAATATAGAGTT‑AAT‑‑T‑‑‑‑atatatatatatatatatatatatatat < 2:1810308/126‑1 (MQ=255) cATTTTTAAAAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGCAAATGAATCAAAGCAAAAACCTCAATATTACCTATAGAGAT‑AAT‑‑G‑‑‑‑atatatatatatatatatatatatatat < 1:1464519/128‑1 (MQ=255) aTTTTTAATAAATATTAGAAATATAAATTTTATTTTTTAAATAAATATTTTATTAAATTAATCAAATAAAAAACATTAATATTATATATAGAGAT‑TAT‑‑T‑‑‑‑agatatatatatatatatatatatatata < 2:1981888/128‑2 (MQ=255) aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatatatatatata > 1:352388/1‑127 (MQ=255) tttttATTATATATTTTATATAAAAAATTTATATTTATAAAAAATATATTTTTATATAATTACAAACAAAAAAATCTATATTAAATATATAGTT‑ATT‑‑T‑‑‑‑atatatatatatatatatatatatatgcaa < 2:3470814/128‑5 (MQ=255) tttAATATATATTAGATATAAAAATTGTATTTTTAAAATATATATTTTATGAAATTAAGCAAATAAAAAACCTCCATATTAACTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatatatatcattaact < 2:883495/128‑9 (MQ=37) taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGa < 1:5244676/128‑1 (MQ=255) taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatatataataaacagaaa > 2:2422300/1‑117 (MQ=255) taaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCa > 2:2347429/1‑128 (MQ=255) aataTTATAAAAAAAAATTTTATTTTTATAAAAAATATATTATTTAATGAATCAAATAAAAAAACTCTATATTAACTATAGAGTT‑AAT‑‑T‑‑‑‑atatatatatatatatatatatatatatatatgcaagcg < 2:1278414/128‑12 (MQ=255) aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCa > 1:951044/1‑128 (MQ=255) aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTATAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatatatatatatatattcaagagat > 2:1917280/1‑117 (MQ=255) tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑‑‑GTATATATATATATATATATATATGCAAGCGATCAGCATaa > 2:27054/1‑128 (MQ=255) atTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATaaa < 1:1891326/128‑1 (MQ=255) ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAATAGAtcatcaa > 1:245640/1‑127 (MQ=255) tatataTAAAAATTGTTTTTTTAAAATAAATATTTTAGGTAATGACGATAANATAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATa < 2:4919450/123‑1 (MQ=255) tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaaa > 2:3200879/1‑128 (MQ=255) taaaTAAAAATTGTATTTTAAAAAAAAATATTTTATGAAATGAAGCAAAGCAAAAAACTCCATATTAAATATAGAGTT‑AAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg < 2:1154441/127‑1 (MQ=255) gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGATAGAGATCATAATaaa > 2:512213/1‑128 (MQ=255) gAAATAAAAATATTATTTTTAAAATAAATATTTTATGAAAATAAGAAAATAAAAAAACTCTATATTACATATAGAGTTAAATA‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATa < 1:1552771/128‑1 (MQ=255) aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAATCAAAAACCTCCATATTACCTATATAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATaaaa < 1:1098058/128‑1 (MQ=255) tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑GAT‑‑ATATATATATATATATATATATATATATACAAGCGATCAGCATAAAAt > 2:4695026/1‑128 (MQ=255) tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑atatatatatatatatataaatata < 1:4195131/103‑1 (MQ=255) aaaaTTGTATTTTTAAAATAAATATTTTATGAATTTAACCAAAGAAAAAATCTACATATTATCTATAGAGTT‑AAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg < 2:4800343/128‑1 (MQ=255) aaaaTTGTATTTTTAAAATAAATATTTTAGTAAATGAACAAAAGAAAAAAAATCAATATTAACTATAGAGTT‑AAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg < 1:3471034/128‑1 (MQ=255) tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCg < 2:3304000/106‑1 (MQ=255) tttttttAAAATAAATATTTTATTAAATGAATAAAATAAAAAAACTATATATTAAATATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTa < 1:2188777/126‑1 (MQ=255) tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAGTT‑AAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGAAAGCGATCAGCATAATATGGAGAATTTTATATATGat > 2:2774588/1‑127 (MQ=255) ttttAAAATAAATATTTTAGTATATGAATCAAATCAAAAAACTCAATATTACCTATAGAGTT‑AAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGAt < 1:1172946/128‑1 (MQ=255) tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTg > 1:3095932/1‑128 (MQ=255) tAAAATATTTATTTTAAGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGCTATCTGCATATATTTGTCATATATAGATCTg > 1:1370820/1‑128 (MQ=255) taattaataTTTTATTAAATGAAGCTAAGCAAAAAAATCCATATTTCCTATAGAGTT‑AAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 1:576919/127‑1 (MQ=255) aaataaatATTTTATGAAATTAAGATAAGCAAAAAACTCCATATTAACTATAGAGTT‑AAT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt < 2:3093414/128‑1 (MQ=255) aaataaatATTTTAGTATATGATTAAAAGAAAAAACCTACATTTTTTATATAGAGTT‑TAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 1:5137853/128‑1 (MQ=255) tatTTTAGGAAATGAAGCAAAGCAAAAACCTCTATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa < 2:3403563/128‑1 (MQ=255) atTTTATGAAATTAATAAAATAAAAAACATCAATATTAAATATAGAGTT‑ATT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa < 1:699842/128‑1 (MQ=255) ttttAGGAAATTAAGCAAAGCAAAAAAATCCATATTATCTATAGAGTT‑TAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa < 2:4520519/128‑1 (MQ=255) ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGAAATGAGtttttgt > 1:3705931/1‑123 (MQ=255) ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAATCGATCACCATAAAATGGTTAAATATATATCTGAGTTTGtataa > 2:3533496/1‑124 (MQ=255) tttAGTAAATGAATCAAATAAAAAACCTCAATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa < 2:402093/128‑1 (MQ=255) tttAGAAAATGAATCAAAGCAAAAAAATAAATATTAACTATATAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa < 2:4998590/128‑1 (MQ=255) ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCACCATAAAATTGTTAAATTTATATCTGATTTGGTAATAAAtt > 2:1079213/1‑128 (MQ=255) gtaaaTGAAGAAAAGAAAAAATCTCAATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt < 1:2613344/126‑1 (MQ=255) ggAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt < 1:5038000/128‑1 (MQ=255) gAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATTGTGAAATTTAGATCTGAGTTTGTCTTAAATTTg > 1:336699/1‑128 (MQ=255) aaTGATTCAAAGCAAAAACCTAGATATAACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttttt < 1:1971050/128‑1 (MQ=255) aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCATCATAAAATGGTGAAATTTAGATCTGATTTGTTCTTAAAttttt > 2:4214855/1‑126 (MQ=255) aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGAATAAAATGTTGATATTTAGATCTGAGTTGTTCTAAAATTTGTAg > 1:4765195/1‑128 (MQ=255) tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTCTCTTAAATTTGTAGttt > 1:814216/1‑128 (MQ=255) aagcaaagcaAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAATTTTAGATCTTAGTTGGTCTTAAATTTGTAGttt > 1:2511231/1‑128 (MQ=255) caaaccaaaAACCTCCATATTACCTATAGAGTT‑AAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtttt < 2:4429311/128‑1 (MQ=255) aaaataaaaaaGCACCATATTATATATATAGAT‑AAT‑‑A‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta < 1:2936631/122‑1 (MQ=255) aaagcaaaAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCTATCATAAAAAAATTGTGAAATTTATATCTGAGTTTGTCTTAAATTTATAGTTtttat > 1:4463049/1‑128 (MQ=255) aagcaaaAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTATATTTGTAGtttttttt > 1:3280259/1‑128 (MQ=255) aagaaaaAAACTCTATATTAAATATATAGTT‑ATTTAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta < 2:2537450/128‑1 (MQ=255) agcaaaAACCTCCATATTACCTATAGAGTT‑AAT‑‑GAC‑‑ATATATATATATATATATATATATATATTCAAGCGATCAACATAAAATGGTTAAATTTAGATCTGAGTTGGTATTAAATTTATAGTTtttat > 2:5349306/1‑128 (MQ=255) caaaAACCTCCATATTAACTATAGAGTT‑AAT‑‑GATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat < 2:5233426/128‑1 (MQ=255) aaaaaaaCTACTTATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg < 1:1262560/127‑1 (MQ=255) aaaaaTATCTATATTACCTATAGAGTT‑ACT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattta < 1:2074116/128‑1 (MQ=255) aaaaaCCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt > 2:432525/1‑124 (MQ=255) aaaaaCCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑AT‑T‑TATATATATATATATATATATATGCAAGCGATCATCATAAAATTGTGAAATTTATCTCTGAGTTGGTCTTATATTTGTAGTTTTTATTtatatt > 2:263417/1‑126 (MQ=255) cttccgatcttatTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg < 1:1013660/118‑1 (MQ=255) tCCATATTACCTATAGAGTT‑AAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta > 1:4543861/1‑128 (MQ=255) ccATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATACACGCGCACCGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTTTAGTTTTTTTTTATAGtatatat > 2:3785355/1‑127 (MQ=255) ccATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg > 1:2706835/1‑128 (MQ=255) atcttAACTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg < 2:5427615/125‑1 (MQ=255) atatTACCTATAGAGTT‑AAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGtt > 1:3949837/1‑128 (MQ=255) taacTATAGAGTT‑AAT‑‑GATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg < 1:229929/125‑1 (MQ=255) tACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATAGTGAAATTTATATCTGAGTTTATCTTAAATTTGTAGTTTTTATATTTAGTTTATAAAGTtaa > 1:5467542/1‑128 (MQ=255) ataGAGTT‑ATT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa < 1:4375376/128‑1 (MQ=255) atagTT‑TAT‑‑T‑‑‑‑ATATATATTTAAATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa < 2:559134/126‑1 (MQ=255) agagTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa < 1:4078849/128‑1 (MQ=255) agTT‑AAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa < 1:238036/128‑1 (MQ=255) aaT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCATAATAAAATTTTGAAATAAATATCTGATTTTTTATTAAATTTGTAGTTTTTATATATATTTTATAAAGTAAATTATTTAGAtttt > 1:3618107/1‑128 (MQ=255) | ATGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTT‑AAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437752‑438007 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |