New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =1568 (0.610)169 (0.080) 90/204 18.0 12.2% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 1174 (0.570)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1660 total aligned reads displayed.

ATGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA  >  CP016816/437752‑438007
                                                                                                                                   |                                                                                                                                   
 tGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑g                                                                                                                                     >  2:4595103/1‑128 (MQ=255)
 tGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑g                                                                                                                                     >  2:159670/1‑128 (MQ=255)
 tGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑g                                                                                                                                     >  2:1449471/1‑128 (MQ=255)
   aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑at                                                                                                                               >  2:750463/1‑128 (MQ=255)
   aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑at                                                                                                                               >  2:700319/1‑128 (MQ=255)
   aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑at                                                                                                                               >  1:3807644/1‑128 (MQ=255)
    aaCTTATTTTTGTAGTTGTAAGTTTCATTTATAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAAGAAAAGCAAAAACCTCCATATTACCTATATAGTTAAT‑‑G‑‑‑‑ata                                                                                                                              >  1:1654782/1‑128 (MQ=255)
       ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAATCAAAGCAAAATCCTCCATATTACCGATAGAGTTAAT‑‑G‑‑‑‑atatat                                                                                                                           >  1:3869572/1‑128 (MQ=255)
        tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAATCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatata                                                                                                                          >  2:3910256/1‑128 (MQ=255)
         aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAAT‑‑G‑‑‑‑atatatat                                                                                                                         >  1:4935971/1‑128 (MQ=255)
          tttttGTAGTTGTAAGTTTCATTTTTAATAGAGAGTAGATATAAAAATTGTATTGTTAAAATAAATATTTTAGTCAATTCAGCTAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatata                                                                                                                        >  1:2872123/1‑128 (MQ=255)
          tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACATATAGAGTTAAT‑‑G‑‑‑‑atatatata                                                                                                                        >  1:3184425/1‑128 (MQ=255)
             ctacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatat                                                                                                                     >  2:2979204/10‑128 (MQ=255)
               gTATTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAAACTCCATATAACCTATAGAGATAAT‑‑G‑‑‑‑atatatatatatat                                                                                                                   <  1:4626753/128‑1 (MQ=255)
               gTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatat                                                                                                                   <  2:2870294/128‑1 (MQ=255)
                 aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatat                                                                                                                 >  2:207586/1‑128 (MQ=255)
                  gTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAATCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatata                                                                                                                <  2:3709849/128‑1 (MQ=255)
                     gTAAGTTTCATTTTTAATAATTATTAGATATAAAAATTGTATTTTTAAAATATATATTTTATTTAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                             <  1:1812191/128‑1 (MQ=255)
                     gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTATAAAATAAAAATTTTAGTAAATGAAGCAAATCAAAAACCTCCATATTACATATAGATTTAAT‑‑A‑‑‑‑atatatatatatatatatat                                                                                                             >  1:4315821/1‑128 (MQ=255)
                      tAAGTTTCATTTATAATAAATATTAGAAATAATAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATACAGTTAAT‑‑G‑‑‑‑atatatatatatatatatata                                                                                                            >  1:4863130/1‑128 (MQ=255)
                        aGTTTCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTTAT‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                          <  2:1680785/128‑1 (MQ=255)
                         gTTTCATTTTTAATAAATATTAGATATAAAAATTTTATTTTTAAAATATATATTTTAGTAAAAGAATAAAACAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                         <  2:2209587/128‑1 (MQ=255)
                          tttAATTTTTTATAAATATTATAAATAAAAAATTTTTTTTTAAAATAAATATTTTATGAAATTAATAACATCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatata                                                                                                        <  2:1389730/128‑1 (MQ=255)
                          tttAATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatata                                                                                                        <  2:4131377/128‑1 (MQ=255)
                            tCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatata                                                                                                      <  1:1722536/128‑1 (MQ=255)
                            tCATTTTTAATAAATATTAGAAATAAAAAATGTATTTTTAAAATAAATATTTTAGTAAATGAATAAAAGCAAAAACATCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatata                                                                                                      <  1:5381622/128‑1 (MQ=255)
                             tttttttAATATATATTATATATAAAAATTTTTTTTTTAAAATATATATTTTTTTAATTTTATCAAAGAAAAAAACTATATATTAAATATAGAGTTAAT‑‑T‑‑‑‑atatatatatatatatatatatatatat                                                                                                     <  2:1810308/126‑1 (MQ=255)
                             cATTTTTAAAAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGCAAATGAATCAAAGCAAAAACCTCAATATTACCTATAGAGATAAT‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                     <  1:1464519/128‑1 (MQ=255)
                              aTTTTTAATAAATATTAGAAATATAAATTTTATTTTTTAAATAAATATTTTATTAAATTAATCAAATAAAAAACATTAATATTATATATAGAGATTAT‑‑T‑‑‑‑agatatatatatatatatatatatatata                                                                                                    <  2:1981888/128‑2 (MQ=255)
                              aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatatata                                                                                                    >  1:352388/1‑127 (MQ=255)
                               tttttATTATATATTTTATATAAAAAATTTATATTTATAAAAAATATATTTTTATATAATTACAAACAAAAAAATCTATATTAAATATATAGTTATT‑‑T‑‑‑‑atatatatatatatatatatatatatgcaa                                                                                                   <  2:3470814/128‑5 (MQ=255)
                                 tttAATATATATTAGATATAAAAATTGTATTTTTAAAATATATATTTTATGAAATTAAGCAAATAAAAAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatcattaact                                                                                                 <  2:883495/128‑9 (MQ=37)
                                   taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGa                                                                                             <  1:5244676/128‑1 (MQ=255)
                                   taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatataataaacagaaa                                                                                               >  2:2422300/1‑117 (MQ=255)
                                      taaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCa                                                                                          >  2:2347429/1‑128 (MQ=255)
                                        aataTTATAAAAAAAAATTTTATTTTTATAAAAAATATATTATTTAATGAATCAAATAAAAAAACTCTATATTAACTATAGAGTTAAT‑‑T‑‑‑‑atatatatatatatatatatatatatatatatgcaagcg                                                                                          <  2:1278414/128‑12 (MQ=255)
                                        aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCa                                                                                          >  1:951044/1‑128 (MQ=255)
                                        aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTATAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatatatattcaagagat                                                                                          >  2:1917280/1‑117 (MQ=255)
                                          tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑GTATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                    >  2:27054/1‑128 (MQ=255)
                                           atTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATaaa                                                                                   <  1:1891326/128‑1 (MQ=255)
                                            ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAATAGAtcatcaa                                                                                      >  1:245640/1‑127 (MQ=255)
                                             tatataTAAAAATTGTTTTTTTAAAATAAATATTTTAGGTAATGACGATAANATAAAACCTCCATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATa                                                                                     <  2:4919450/123‑1 (MQ=255)
                                             tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaaa                                                                                   >  2:3200879/1‑128 (MQ=255)
                                               taaaTAAAAATTGTATTTTAAAAAAAAATATTTTATGAAATGAAGCAAAGCAAAAAACTCCATATTAAATATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                             <  2:1154441/127‑1 (MQ=255)
                                               gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGATAGAGATCATAATaaa                                                                                   >  2:512213/1‑128 (MQ=255)
                                               gAAATAAAAATATTATTTTTAAAATAAATATTTTATGAAAATAAGAAAATAAAAAAACTCTATATTACATATAGAGTTAAATAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATa                                                                                     <  1:1552771/128‑1 (MQ=255)
                                                aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAATCAAAAACCTCCATATTACCTATATAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATaaaa                                                                                  <  1:1098058/128‑1 (MQ=255)
                                                   tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATACAAGCGATCAGCATAAAAt                                                                                 >  2:4695026/1‑128 (MQ=255)
                                                   tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatataaatata                                                                                                        <  1:4195131/103‑1 (MQ=255)
                                                     aaaaTTGTATTTTTAAAATAAATATTTTATGAATTTAACCAAAGAAAAAATCTACATATTATCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                             <  2:4800343/128‑1 (MQ=255)
                                                     aaaaTTGTATTTTTAAAATAAATATTTTAGTAAATGAACAAAAGAAAAAAAATCAATATTAACTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                             <  1:3471034/128‑1 (MQ=255)
                                                          tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCg                                                                                              <  2:3304000/106‑1 (MQ=255)
                                                            tttttttAAAATAAATATTTTATTAAATGAATAAAATAAAAAAACTATATATTAAATATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTa                                                                      <  1:2188777/126‑1 (MQ=255)
                                                              tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGAAAGCGATCAGCATAATATGGAGAATTTTATATATGat                                                              >  2:2774588/1‑127 (MQ=255)
                                                               ttttAAAATAAATATTTTAGTATATGAATCAAATCAAAAAACTCAATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGAt                                                                   <  1:1172946/128‑1 (MQ=255)
                                                                tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTg                                                                >  1:3095932/1‑128 (MQ=255)
                                                                  tAAAATATTTATTTTAAGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGCTATCTGCATATATTTGTCATATATAGATCTg                                                                >  1:1370820/1‑128 (MQ=255)
                                                                    taattaataTTTTATTAAATGAAGCTAAGCAAAAAAATCCATATTTCCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                              <  1:576919/127‑1 (MQ=255)
                                                                    aaataaatATTTTATGAAATTAAGATAAGCAAAAAACTCCATATTAACTATAGAGTTAAT‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                            <  2:3093414/128‑1 (MQ=255)
                                                                    aaataaatATTTTAGTATATGATTAAAAGAAAAAACCTACATTTTTTATATAGAGTTTAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                              <  1:5137853/128‑1 (MQ=255)
                                                                           tatTTTAGGAAATGAAGCAAAGCAAAAACCTCTATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                   <  2:3403563/128‑1 (MQ=255)
                                                                            atTTTATGAAATTAATAAAATAAAAAACATCAATATTAAATATAGAGTTATT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                    <  1:699842/128‑1 (MQ=255)
                                                                             ttttAGGAAATTAAGCAAAGCAAAAAAATCCATATTATCTATAGAGTTTAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa                                                     <  2:4520519/128‑1 (MQ=255)
                                                                             ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGAAATGAGtttttgt                                                       >  1:3705931/1‑123 (MQ=255)
                                                                             ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAATCGATCACCATAAAATGGTTAAATATATATCTGAGTTTGtataa                                                     >  2:3533496/1‑124 (MQ=255)
                                                                              tttAGTAAATGAATCAAATAAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                    <  2:402093/128‑1 (MQ=255)
                                                                              tttAGAAAATGAATCAAAGCAAAAAAATAAATATTAACTATATAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                    <  2:4998590/128‑1 (MQ=255)
                                                                               ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCACCATAAAATTGTTAAATTTATATCTGATTTGGTAATAAAtt                                                 >  2:1079213/1‑128 (MQ=255)
                                                                                  gtaaaTGAAGAAAAGAAAAAATCTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                <  1:2613344/126‑1 (MQ=255)
                                                                                  ggAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                              <  1:5038000/128‑1 (MQ=255)
                                                                                   gAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATTGTGAAATTTAGATCTGAGTTTGTCTTAAATTTg                                               >  1:336699/1‑128 (MQ=255)
                                                                                     aaTGATTCAAAGCAAAAACCTAGATATAACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttttt                                       <  1:1971050/128‑1 (MQ=255)
                                                                                      aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCATCATAAAATGGTGAAATTTAGATCTGATTTGTTCTTAAAttttt                                              >  2:4214855/1‑126 (MQ=255)
                                                                                      aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGAATAAAATGTTGATATTTAGATCTGAGTTGTTCTAAAATTTGTAg                                            >  1:4765195/1‑128 (MQ=255)
                                                                                       tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTCTCTTAAATTTGTAGttt                                         >  1:814216/1‑128 (MQ=255)
                                                                                         aagcaaagcaAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAATTTTAGATCTTAGTTGGTCTTAAATTTGTAGttt                                         >  1:2511231/1‑128 (MQ=255)
                                                                                            caaaccaaaAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtttt                                        <  2:4429311/128‑1 (MQ=255)
                                                                                            aaaataaaaaaGCACCATATTATATATATAGATAAT‑‑A‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                      <  1:2936631/122‑1 (MQ=255)
                                                                                             aaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCTATCATAAAAAAATTGTGAAATTTATATCTGAGTTTGTCTTAAATTTATAGTTtttat                                     >  1:4463049/1‑128 (MQ=255)
                                                                                              aagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTATATTTGTAGtttttttt                                    >  1:3280259/1‑128 (MQ=255)
                                                                                              aagaaaaAAACTCTATATTAAATATATAGTTATTTAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                      <  2:2537450/128‑1 (MQ=255)
                                                                                               agcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑GAC‑‑ATATATATATATATATATATATATATATTCAAGCGATCAACATAAAATGGTTAAATTTAGATCTGAGTTGGTATTAAATTTATAGTTtttat                                     >  2:5349306/1‑128 (MQ=255)
                                                                                                 caaaAACCTCCATATTAACTATAGAGTTAAT‑‑GATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat                                     <  2:5233426/128‑1 (MQ=255)
                                                                                                 aaaaaaaCTACTTATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                               <  1:1262560/127‑1 (MQ=255)
                                                                                                  aaaaaTATCTATATTACCTATAGAGTTACT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattta                                  <  1:2074116/128‑1 (MQ=255)
                                                                                                  aaaaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                    >  2:432525/1‑124 (MQ=255)
                                                                                                  aaaaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATTTATATATATATATATATATATATGCAAGCGATCATCATAAAATTGTGAAATTTATCTCTGAGTTGGTCTTATATTTGTAGTTTTTATTtatatt                              >  2:263417/1‑126 (MQ=255)
                                                                                                   cttccgatcttatTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                               <  1:1013660/118‑1 (MQ=255)
                                                                                                         tCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta                           >  1:4543861/1‑128 (MQ=255)
                                                                                                          ccATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATACACGCGCACCGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTTTAGTTTTTTTTTATAGtatatat                        >  2:3785355/1‑127 (MQ=255)
                                                                                                          ccATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg                      >  1:2706835/1‑128 (MQ=255)
                                                                                                            atcttAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg                      <  2:5427615/125‑1 (MQ=255)
                                                                                                            atatTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGtt                    >  1:3949837/1‑128 (MQ=255)
                                                                                                                taacTATAGAGTTAAT‑‑GATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg                      <  1:229929/125‑1 (MQ=255)
                                                                                                                tACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATAGTGAAATTTATATCTGAGTTTATCTTAAATTTGTAGTTTTTATATTTAGTTTATAAAGTtaa                  >  1:5467542/1‑128 (MQ=255)
                                                                                                                     ataGAGTTATT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa           <  1:4375376/128‑1 (MQ=255)
                                                                                                                       atagTTTAT‑‑T‑‑‑‑ATATATATTTAAATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa           <  2:559134/126‑1 (MQ=255)
                                                                                                                       agagTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa           <  1:4078849/128‑1 (MQ=255)
                                                                                                                         agTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa         <  1:238036/128‑1 (MQ=255)
                                                                                                                              aaT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCATAATAAAATTTTGAAATAAATATCTGATTTTTTATTAAATTTGTAGTTTTTATATATATTTTATAAAGTAAATTATTTAGAtttt     >  1:3618107/1‑128 (MQ=255)
                                                                                                                                   |                                                                                                                                   
ATGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA  >  CP016816/437752‑438007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.