| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4037260 = | 0 (0.000) | 11 (0.140) +GTATTCTACGGCTGAACCATGTAATGGTAGGTCTG |
6/210 | 3.0 | 25.3% | noncoding (1/76 nt) | alaT | tRNA‑Ala |
| ? | NC_000913 | = 4175818 | 87 (0.810) | noncoding (65/76 nt) | thrT | tRNA‑Thr | |||||
AACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4037385‑4037260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGATTCGAACTGCCGACCTCACCCTTACCAAGGGTGCGCTCT‑ACCAACTGAGCTATATC < NC_000913/4175818‑4175757 ||||||||||||||||||||||||||||||||||| AACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGA > 2:2487/1‑141AACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGA > 2:389271/1‑141 TTTTTTATTTAATCACTACAGAGATGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGA > 2:1661623/1‑141 TTTTTTATTTAATCACTACAGAGATGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGA > 2:1662491/1‑141 TTTTTTATTTAATCACTACAGAGATGGTGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGA > 2:1664013/1‑141 TTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGATTTGAAC > 2:1327229/1‑141 TGGAGCCAAGCGGGATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCA > 1:418488/1‑141 ATCGAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGTGCGCTCT‑Aa < 1:1363712/141‑2 GAACCGCTGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGTGCGCTCT‑Aacca > 1:530626/1‑137 GCAGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGTGCGCTCTAACCAACTGA > 2:1848642/1‑141 GCAGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGTGCGCTCTAACCAACTGA > 2:78582/1‑141 GCAGACCTCCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGTGCGCTCTAACCAACTGA > 2:78679/1‑141 CCTGCGTGCAAGGCAGGCGCTCTCCCAGCTGAGCTATGGCCCCGTATTCTACGGCTGAACCATGTAATGGTAGGTCTGGGCAGATTTGAGCTGCCGACCTCACCCGTATCAGGGGTGCGCTCTAACCAACTGAGCTAcaga > 1:547349/1‑137 ||||||||||||||||||||||||||||||||||| AACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGGATCGAACCGCAGACCTCCTGCGTGCAAAGCAGGCGCTCTCCCAGCTGAGCTATAGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4037385‑4037260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGATTCGAACTGCCGACCTCACCCTTACCAAGGGTGCGCTCT‑ACCAACTGAGCTATATC < NC_000913/4175818‑4175757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |