New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4037260 =	0 (0.000)	11 (0.140) +GTATTCTACGGCTGAACCATGTAATGGTAGGTCTG	6/210	3.0	25.3%	noncoding (1/76 nt)	alaT	tRNA‑Ala
	?	NC_000913	= 4175818	87 (0.810)					noncoding (65/76 nt)	thrT	tRNA‑Thr

AGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTT  >  NC_000913/4037162‑4037385                                                                                                   |                                                                                                                              tctgtagctcagttggttagagcgcacccctgatacgggtgaggtcggcagctcaaatctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCagg                                                                                     >  1:547349‑M1/99‑141 (MQ=255)         tcagttggttagagcgcacccctgataagggtgaggtcggcagttcaaatctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCTGc                                                                             >  2:1848642‑M1/91‑141 (MQ=255)         tcagttggttagagcgcacccctgataagggtgaggtcggcagttcaaatctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCTGc                                                                             >  2:78582‑M1/91‑141 (MQ=255)         tcagttggttagagcgcacccctgataagggtgaggtcggcagttcaaatctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCTGc                                                                             >  2:78679‑M1/91‑141 (MQ=255)              tggttagagcgcacccctgataagggtgaggtcggcagttcaaatctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTc                                                                        >  1:530626‑M1/86‑141 (MQ=255)                 ttagagcgcacccctgataagggtgaggtcggcagttcaaatctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGAt                                                                     <  1:1363712‑M1/59‑1 (MQ=255)                               tgataagggtgaggtcggcagttcaaatctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTcca                                                       >  1:418488‑M1/69‑141 (MQ=255)                                                   gttcaaatctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATtaaa                                   >  2:1327229‑M1/49‑141 (MQ=255)                                                          tctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCATCTCTGTAGTGATTAAATaaaaaa                            >  2:1661623‑M1/42‑141 (MQ=255)                                                          tctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCATCTCTGTAGTGATTAAATaaaaaa                            >  2:1662491‑M1/42‑141 (MQ=255)                                                          tctgcccagacctaccattacatggttcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCATCTCTGTAGTGATTAAATaaaaaa                            >  2:1664013‑M1/42‑141 (MQ=255)                                                                                    tcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGtt  >  2:2487‑M1/16‑141 (MQ=255)                                                                                    tcagccgtagaatacGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGtt  >  2:389271‑M1/16‑141 (MQ=255)                                                                                                   |                                                                                                                              AGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAGTCCACTCAGGCCTACCAAATTTGCACGGCAAATTTGAAGAGGTTTTAACTACATGTTATGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTT  >  NC_000913/4037162‑4037385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.