Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A20 F4 I1 R1 86 415.0 19624302 98.4% 19310313 137.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC AE015451_phaM1 5,681,415 +CGGG intergenic (‑133/+71) PP_4986 CDS (Channel protein_ hemolysin III family) ← / ← PP_4987 CDS (putative Chemotaxis protein) –/–

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451_phaM1 = 568141515 (0.030)180 (0.420)
+CGGG		 43/264 1.3 92.5% intergenic (‑133/+71) PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) –/–
?AE015451_phaM1 5681416 = 15 (0.030)intergenic (‑134/+70) PP_4986 CDS (Channel protein_ hemolysin III family)/PP_4987 CDS (putative Chemotaxis protein) –/–

Only 100 of 185 total aligned reads displayed.

ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451_phaM1/5681279‑5681415
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACC  >  AE015451_phaM1/5681416‑5681552
                                                                                                                                          ||||                                                                                                                                         
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGACGGGGGCGCCGGCTTTCATAGCCAATCCATG‑AACCGCCc                                                                                                                                             >  1:4514790/1‑138
   TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGG                                                                                                                                          <  1:4820394/139‑1
       AACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGGGAAGCGGCCCCAGGGTTTCATTGCCACTGCATG‑AACCGCCGGGGGTGC                                                                                                                                      >  2:1383445/1‑139
       AACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGGCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGC                                                                                                                                      >  2:2849526/1‑139
        ACACAGTCCTCCTGAGGTGTGCTGGGTTGCTGTTGTGATGCTGATGGCTTCGTTCGTTGGGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  2:2156763/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:1323853/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:4793771/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:689954/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:837440/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:8487369/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:9104141/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  2:8042355/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  2:7603562/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  2:2752671/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:2947669/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:2110664/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:1832965/139‑1
        ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCCCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  1:3035794/139‑1
         CACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGGGCGAACCGGCCCCACGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGGTG                                                                                                                                    >  2:4575965/1‑139
          ACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTGGCGAAACGGGCGCGCACCGGCCCCACGCTTTAAATTCCACATCAAGAAACCGCCGGGGCTGCTG                                                                                                                                    >  2:8730488/1‑139
                 TCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  2:4835275/130‑1
                 TCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     >  1:4835275/1‑130
                   cgGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  2:6570420/137‑1
                   CTGAGGTGGGGTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  2:692756/139‑1
                   CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  2:2933961/139‑1
                   CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  1:6885123/139‑1
                   CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  2:7398379/139‑1
                   CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  2:8924780/139‑1
                   CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  2:3915676/139‑1
                   CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  1:257616/139‑1
                    TGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTAT                                                                                                                         <  1:5864940/139‑1
                     GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          >  1:4718131/1‑137
                     GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  2:4100234/137‑1
                     GAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          >  1:4100234/1‑137
                             CTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTTTGTCGCGAAACGGGCCCCAAGCGGGCCCAGGCTTTCATTTCCACAGCAAG‑AACCGCCCGGGCTCCTGCGCAGCCCAAACGCGCCACA                                                                                                                >  1:4937702/1‑139
                             CTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGCAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCCCCGGGGCTGCTGCGCAGCCCAATAGCGACACA                                                                                                                >  2:4703271/1‑139
                             CTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGCAACGGGCGCGTAGCGGCCCCAGGCTTTTATAGCCACAGCATT‑AACCGCCGGGGCCGCTGCGCAGCCCAATAGCGACACA                                                                                                                >  2:7256930/1‑139
                             CTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGGGCGAAGGGGCCCCAGGCTTTAATTGCCACTGGATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACA                                                                                                                >  2:2200499/1‑139
                             CTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGGGCAGCCCTATCGCGACAaa                                                                                                                >  2:1680249/1‑137
                             CTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     >  1:3245893/1‑118
                             CTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCT                                                                                                                                     <  2:3245497/118‑1
                              TGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          >  2:895307/1‑128
                              TGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTA                                                                                                                          <  1:895307/128‑1
                                GGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGCAAGGGGCGCGAAGCGGCCCCACGCTTTCATTGCCACTGCCTG‑AACCGCCGGGGCTGCTGGGCACCCCTATCGCGACACAAGG                                                                                                             >  2:2328130/1‑139
                                GGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGGTGCTGCGCAGCCCAATCGCGAAACAAGG                                                                                                             >  2:2435292/1‑139
                                GGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCCCAAGGGGCGCGAAGCGGCCCCAGGCTTTCAATGCCACTGCATG‑AACCGCCGGGGCTGCGGCGCCGCCCTATCCCGCCACCAGG                                                                                                             >  2:2083244/1‑139
                                        TTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGTAAGGGGCGCGAAGCGGGCCCCGGCTTTAATTGCCACTGCCAG‑AACCGCCCGGGCTGGTGCGCCGCCCTATAGCGACACAAGGCCGCTCCC                                                                                                     >  2:2330802/1‑139
                                        TTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCAATGCCACAGCATG‑TACCGCCGGGGCTGCTGCGCACCCCTATCGCGACACAACGCCGCTCCC                                                                                                     >  2:3210537/1‑139
                                             ATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGCAAGGGGCGCGAAGGCGCCCCACGCTTTCAATGCCACACCAAG‑AAACGCCGGGGCTCCTGCGCACCCCAATCGCGACACAAGGCCGCTCCCAATCC                                                                                                >  2:1685253/1‑139
                                             ATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTG                                                                                                                                    <  2:3972758/103‑1
                                             ATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTG                                                                                                                                    >  1:3972758/1‑103
                                                   ATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGCCTTTCAATGCCACTGCATG‑AACCGCCCGGGCTGCTCCGCCCCCCTATCGCGACACAAGGCCCCTCCCACTCCCCACCA                                                                                          >  2:4904982/1‑139
                                                             tgTTTGTGGGAGCGGCCTTGTGGCGCGAAAGGGGCGCTAAGCGGCCCCTGGGTTTCATTGCCAGTGCTTG‑AACCGCGGGGGCTGCTGCGCAGCCATATCGCGACACATGGCCGCTCCCACTCCAGACCACCAGGCCCTG                                                                                <  2:1942920/137‑1
                                                                               TGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCAGTGCATG‑AACCGCCGGGGCTGGTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCA                                                              <  2:4116879/139‑1
                                                                               TGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCA                                                              <  2:4514790/139‑1
                                                                                tTGTCGCTAAAGGGGCGCTAAGCGGCCCCAGGCTTTCATTGCCACTGCTTG‑AACCGCCGGGGCTGCTGCGAACCCATATCGCTACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAA                                                             <  2:4449037/138‑1
                                                                                GTGTCGGGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCAGTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAA                                                             <  2:4928724/139‑1
                                                                                GTGTCGCTAAAGGGGCGCGAAGCGGCCCCTGGGTTTCTTTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAA                                                             <  1:3533206/139‑1
                                                                                        AAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCCGCCCAATAGCCACACAAGGGCGCTCCCACTACAGAACACCAGGGCCTTCGCCTCAAATCCTAAACAACGTCAGGT                                                     >  2:5200551/1‑139
                                                                                        AAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGT                                                     >  2:780801/1‑139
                                                                                        AAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCG                                                                              >  2:3827277/1‑114
                                                                                        AAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCG                                                                              <  1:3827683/114‑1
                                                                                        AAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAACGCCGCTCCCACACCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGT                                                     >  2:8681269/1‑139
                                                                                        AAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCAATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGT                                                     >  2:5904960/1‑139
                                                                                         AAGGGGCGCGAAGGGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTTCGCCACACAACCTAACCAAGGTCAGGTT                                                    >  1:1557224/1‑139
                                                                                         AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGGTGGTGCGCAGCCCTATCGCGACACAAGGCCCCTCCCACTCCACACCACCACGCCCTGCGCCTCACATACTAACCAAGGTCAGGTT                                                    >  2:8713413/1‑139
                                                                                         AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAACGTCAGGTT                                                    >  1:743814/1‑139
                                                                                         AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTA                                                                  >  2:4295787/1‑125
                                                                                         AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTA                                                                  <  1:4295787/125‑1
                                                                                         AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCAAATCCTAAACAATGTCACGTT                                                    >  2:3182991/1‑139
                                                                                         AAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCAATACCGACACAACGCCGCTCCCACTCCAGACCACCAGGCCCAGCGCCTCACAACCTAAACAAGGTCAGGTT                                                    >  2:6968455/1‑139
                                                                                                         CCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTTTCGCGACACAAGGCCGCTCCCACTCCAGACCACAAGGCCCTGAGCCTCACATCCAAACCAAGGTCAGGTTGCAGATCCGCGTCACG                                    >  2:3990640/1‑139
                                                                                                         CCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTGAGGTTGCAGATCCGCGTCACG                                    >  2:4203452/1‑139
                                                                                                         CCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACc                                    >  2:5139969/1‑138
                                                                                                         CCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACG                                    >  2:9126432/1‑139
                                                                                                         CCCCAGGCTTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCAATCGCGACACAACGCCGCTCCCACTCCAGACCACCAGGCCCTCCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCAGCGTCACG                                    >  2:5890030/1‑139
                                                                                                                 TTTCATTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTAAAGCGACACAATGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAACGTCAGGTTGGAGTTCCGCGTCACGCACCAGCC                            >  1:3112920/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGCCACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCC                       >  2:3693044/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGGGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCC                       >  2:7446846/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCC                       >  2:1087190/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCC                       >  2:6676377/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCC                       >  2:6676448/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCACGTTGCAGATACGCGTCACGCACCAGCCTTTCC                       >  2:9499778/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAACGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCC                       >  2:1193774/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACACCAGACCACCAGGCCCTGCGCCTCACATCCAAACCAAGGTCAGGTTGCAGATACGCGTCACGCACCAGCCTTTCC                       >  2:5364054/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAACGCCGCTCCCACTCCAGACCACCAGGCCCTGGGCCTCACATACTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCACCCTTTCC                       >  1:1501728/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATAGCGACACAATGCCGCTCCCACTCCACACCACCACGCCCAGCGCCTCACATCCTAACCAAGGTCAGGTTGGAGATCCGCGTCACGCACCAGCCTTTCC                       >  2:9086056/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATAGCGACACAACGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATACTAAACAAGGTCAGGTTGCAGATGCGCGTCACGCACCAGCCATTCC                       >  1:4347358/1‑139
                                                                                                                      TTGCCACTGCATG‑AACCGCCGGGGCTGCTGCGCAGCCCCATAGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCACACATACAAACCAAGGTCAGGTTGCAGATCCGCGTCACCCCCCAGCCTTTCC                       >  1:886691/1‑139
                                                                                                                           agggctTG‑AACGGCGGGGGGTGCTGCGAAGCCCTATCGCTAAAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGC                  <  2:4390882/133‑1
                                                                                                                                ATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGTTCCGGGTCACGCACCAGCCTTTCCAAAGGGACCA             >  2:54920/1‑139
                                                                                                                                ATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTGCAATGCGACCA             >  2:1566176/1‑139
                                                                                                                                ATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCA             >  2:1666909/1‑139
                                                                                                                                ATG‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCAAACCAACGTCACGTTGCAGATCCGCGTCACGCCCCAGCCTTTACAATGCGACCA             >  2:8367735/1‑139
                                                                                                                                  G‑AACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCAACACGCCCAGCGCCACACAAACTAACCAATCTCAGGTTGCTGATCCCCGTCACCCCCCAGCCTTTACAATGCGACCAGG           >  1:6772703/1‑139
                                                                                                                                      CCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCC        <  1:6928734/139‑1
                                                                                                                                       CGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCG       <  2:6761733/139‑1
                                                                                                                                       CGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCG       >  2:6640517/1‑139
                                                                                                                                           GGGGCTGCTGCGCAGCCCTATAGCGACAAAAGGCCGCTCCCACTCCAGACCACCACGCCCTGCGCCTCACATACTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGGGCCCAGGTCCGGTAC   >  1:3994590/1‑139
                                                                                                                                            GGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACCCACCAGCCTTTCCAATGCGACCAGGTCCGGTAac  >  1:2332672/1‑137
                                                                                                                                          ||||                                                                                                                                         
ACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATG‑AACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451_phaM1/5681279‑5681415
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACC  >  AE015451_phaM1/5681416‑5681552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTC  >  AE015451_phaM1/5681269‑5681566
                                                                                                                                                  |                                                                                                                                                           
TCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggc                                                                                                                                                       <  VH01111:79:AACJV3JHV:2:1207:76117:31007/153‑7 (MQ=60)
TCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggc                                                                                                                                                       <  VH01111:79:AACJV3JHV:2:1207:74526:30477/153‑7 (MQ=60)
     GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG                                                                                                                                                  <  VH01111:79:AACJV3JHV:2:1206:31827:30420/153‑1 (MQ=60)
     GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG                                                                                                                                                  <  VH01111:79:AACJV3JHV:2:1309:61669:40378/153‑1 (MQ=60)
     GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG                                                                                                                                                  <  VH01111:79:AACJV3JHV:1:2413:7097:24021/153‑1 (MQ=60)
     GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG                                                                                                                                                  <  VH01111:79:AACJV3JHV:2:1310:28135:24722/153‑1 (MQ=60)
     GTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG                                                                                                                                                  <  VH01111:79:AACJV3JHV:2:1206:32831:31764/153‑1 (MQ=60)
        ATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC                                                                                                                                               <  VH01111:79:AACJV3JHV:1:1207:24802:41684/153‑1 (MQ=60)
        ATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGC                                                                                                                                               <  VH01111:79:AACJV3JHV:2:1608:49020:5733/153‑1 (MQ=60)
           CATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGC                                                                                                                                            <  VH01111:79:AACJV3JHV:1:2609:34989:21314/153‑1 (MQ=60)
             TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC                                                                                                                                          >  VH01111:79:AACJV3JHV:1:2611:76344:23889/1‑153 (MQ=60)
             TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC                                                                                                                                          >  VH01111:79:AACJV3JHV:1:2611:76363:23908/1‑153 (MQ=60)
             TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC                                                                                                                                          <  VH01111:79:AACJV3JHV:1:2610:42260:50242/153‑1 (MQ=60)
             TGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCC                                                                                                                                          <  VH01111:79:AACJV3JHV:1:2610:39988:49219/153‑1 (MQ=60)
                 AACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCACCCCAATC                                                                                                                                      >  VH01111:79:AACJV3JHV:1:2607:33891:21125/1‑153 (MQ=60)
                 AACACAGACCTCCTGAGGTAGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGGTGCTGCGCAGCCCTATC                                                                                                                                      >  VH01111:79:AACJV3JHV:1:2413:11415:42423/1‑153 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGTTGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1611:66574:34187/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGTAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:2:2407:26033:20045/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1601:63089:10258/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1506:77386:33487/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1209:30369:53914/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:2201:47392:34661/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:2204:45593:32370/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:2:1206:67994:26861/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:2:2504:26071:8118/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1601:27377:41609/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1209:30426:54539/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1505:35065:50052/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:2603:17550:40568/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:2609:20466:55259/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1403:37754:2761/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1214:19519:45187/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:1214:17247:46171/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:2:2310:55193:18796/153‑1 (MQ=60)
                  ACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCCCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCG                                                                                                                                     <  VH01111:79:AACJV3JHV:1:2204:52258:39110/153‑1 (MQ=60)
                         CCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTTTGTCGCGAAACGGGCCCCAAGCGGGCCCAGGCTTTCATTTCCACAGCAAGAACCGCCCGGGCTCCTGCGCAGCCCAAACGCGCCACA                                                                                                                              >  VH01111:79:AACJV3JHV:1:2614:51747:49768/1‑153 (MQ=60)
                         CCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCtgtctc                                                                                                                              >  VH01111:79:AACJV3JHV:1:2211:33115:55107/1‑147 (MQ=60)
                         CCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCtgtctc                                                                                                                              >  VH01111:79:AACJV3JHV:1:2211:33758:56205/1‑147 (MQ=60)
                         CCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCCAAACCGGCCCCAAGCGGCCCCCGCCTTTGATTGCCACAGCATGAACCGCcccggctcctgccgccccctaaagcgccacc                                                                                                                              >  VH01111:79:AACJV3JHV:1:2611:32433:33071/1‑122 (MQ=60)
                             CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC                                                                                                                          <  VH01111:79:AACJV3JHV:1:1109:63336:35077/153‑1 (MQ=60)
                             CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC                                                                                                                          <  VH01111:79:AACJV3JHV:1:2406:37508:22393/153‑1 (MQ=60)
                             CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC                                                                                                                          <  VH01111:79:AACJV3JHV:2:1510:17569:28470/153‑1 (MQ=60)
                             CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC                                                                                                                          <  VH01111:79:AACJV3JHV:2:2510:20485:31386/153‑1 (MQ=60)
                             CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC                                                                                                                          <  VH01111:79:AACJV3JHV:1:1302:10449:37860/153‑1 (MQ=60)
                             CTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC                                                                                                                          <  VH01111:79:AACJV3JHV:1:1302:16451:42612/153‑1 (MQ=60)
                             CTGAGGTGGGCTGGGTTCCTGTTGAGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGC                                                                                                                          <  VH01111:79:AACJV3JHV:2:1510:17872:28167/153‑1 (MQ=60)
                              TGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCC                                                                                                                         <  VH01111:79:AACJV3JHV:2:1304:32490:5449/153‑1 (MQ=60)
                              TGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCC                                                                                                                         <  VH01111:79:AACJV3JHV:1:2411:34194:41344/153‑1 (MQ=60)
                                         GGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCctgtctcttataaacatctacc                                                                                                              >  VH01111:79:AACJV3JHV:1:2409:22511:21749/1‑131 (MQ=60)
                                                                         ataagagacagGGCCTTTTGTCGCGAAAGGGGCGCGAAGCGGCCCAAGGCTTTCTTTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAC                                                                              <  VH01111:79:AACJV3JHV:2:1103:32603:32711/142‑1 (MQ=60)
                                                                         ataagagacagGGCCTTGTGTCGCGAAAGGGGCGCTATGCGGCCCATGGGTTTATTTGCAACTGCTTGAACCGCCGGGGCTGCTGCGCAGCCATATCGCGAAACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAC                                                                              <  VH01111:79:AACJV3JHV:2:2103:32509:36440/142‑1 (MQ=60)
                                                                         ataagagacagGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAC                                                                              <  VH01111:79:AACJV3JHV:1:2404:40329:20519/142‑1 (MQ=60)
                                                                         ataagagacagGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAC                                                                              <  VH01111:79:AACJV3JHV:1:2404:34535:19761/142‑1 (MQ=60)
                                                                            GTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG                                                                                                                                                  <  VH01111:79:AACJV3JHV:2:1112:57011:37273/82‑1 (MQ=60)
                                                                            GTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG                                                                                                                                                  <  VH01111:79:AACJV3JHV:2:2112:63392:39943/82‑1 (MQ=60)
                                                                            GTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTG                                                                                                                                                  <  VH01111:79:AACJV3JHV:2:2112:60855:39905/82‑1 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGGGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACAAAAGGCCGCTCCCACTCCAGACCACCAGGCCCTTCGCCACACAACCTAACCAAGGTCAGGTT                                                                  >  VH01111:79:AACJV3JHV:1:1410:48888:40738/1‑153 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggggggcggcgccgccccatacccacacaaaggcgcgcccccacaacacccccccgcccctccccccacaaaaaaaaaaactggaggtt                                                                  >  VH01111:79:AACJV3JHV:2:1613:8612:25952/1‑62 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgcttggcacgcctatctccacacaagtcccctgccccaacatcaacccacgcccatgcgctcaaaatcaaaacaatatcatctt                                                                  >  VH01111:79:AACJV3JHV:2:2506:36580:20481/1‑62 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGGGCAGCCCTATCGCCCCACAACGCCGCTCCCACTCCCGACCACCAGGCCCAGCGCCTCACAACCTAAACAACGTCACGTT                                                                  >  VH01111:79:AACJV3JHV:1:2205:15183:19724/1‑153 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCAATCGCGACACAACGCCGCTCCCACACCACACCACCAGGCCCTGCGCCTCACATACTAAACAACGTCAGGTT                                                                  >  VH01111:79:AACJV3JHV:2:1506:44305:20632/1‑153 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTT                                                                  <  VH01111:79:AACJV3JHV:1:2506:60192:35418/153‑1 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAACGTCAGGTT                                                                  >  VH01111:79:AACJV3JHV:1:1211:40973:40700/1‑153 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATAGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTT                                                                  >  VH01111:79:AACJV3JHV:1:2510:44305:31310/1‑153 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCAATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTT                                                                  <  VH01111:79:AACJV3JHV:1:2506:58886:27864/153‑1 (MQ=60)
                                                                                     GCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCAGCTGCGCAGCCCAAAAGCGACACAACGCCGCTCCCACACCCGACCAACAGGCCCAGCGCCTAAAATACTAAACAACGTCAGGTT                                                                  >  VH01111:79:AACJV3JHV:1:1202:22511:16221/1‑153 (MQ=50)
                                                                                          GTGTCGCTAAAGGGGCGCGAAGCGGCCCCTGGGTTTCTTTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGA                                                             <  VH01111:79:AACJV3JHV:1:2308:60666:4919/153‑1 (MQ=60)
                                                                                                    AGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAATGCCGCTaccacaaacaacgaagccatcagcatcacaaaaggaacccagcccacctaaggtggtctgtgtttgc                                                   >  VH01111:79:AACJV3JHV:1:1413:39004:39981/1‑86 (MQ=60)
                                                                                                     GGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGTACCGCCGGGGCTGCTGCGCAGCCCTAACGCGACACAAGGCCGCACCCAC                                                                                                                 >  VH01111:79:AACJV3JHV:1:1210:55212:40662/1‑90 (MQ=60)
                                                                                                     GGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggggggtggggcgccccatcgcgccacaacgccgcccccccaaaaaaacaatccaacaccaaaaaaaaaacaaaccaccccaccacaggaggtgtgtgttttct                                                  >  VH01111:79:AACJV3JHV:2:2114:74886:25081/1‑46 (MQ=60)
                                                                                                     GGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCAAAAGCGACACAACGCCGCTCCCACaaaaaaacaacccataatcaacacaaaatgaaaccacccccccacagctggtgtgtgttttca                                                  >  VH01111:79:AACJV3JHV:2:2304:25578:18644/1‑90 (MQ=60)
                                                                                                       GGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGGTGCTGCGCAGCCCTATAGCGACACAAAGCCGCTCCCACACCACACCACCACGCCCAGCGCCTCACAaacaaaaaaacgtcatgtttgagattcgcgtcaacca                                                >  VH01111:79:AACJV3JHV:2:2410:28305:27467/1‑116 (MQ=60)
                                                                                                             AAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggggtggtggggcgcccgttagggccacaacgccgcgcgcccaccagaccaccacgccctgggcctcacatactaaccaacgtcagggttgagtttcgggtcacgcaccaccc                                          >  VH01111:79:AACJV3JHV:2:1213:71819:44884/1‑38 (MQ=60)
                                                                                                             AAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggggggtggggcgccccaaagcgccccaacgccccgccccccccacaccaccacccccagcggctcacaaactaacaaacgtgagggttgagattcccggcacccaccaccc                                          >  VH01111:79:AACJV3JHV:2:1214:26752:40908/1‑38 (MQ=60)
                                                                                                             AAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggggggtgcgccgccccaaaccgccacaacgccgcacccccaccccacccccccccccagcgccccacacacaaaaccacctcacggttgagatacccgtcaccccaccccc                                          >  VH01111:79:AACJV3JHV:2:1214:27264:40927/1‑38 (MQ=60)
                                                                                                             AAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggggggctggggcgcccgatccccacacaatgccccccccacaacacaacaccaccccctgccccccccaaacaaaccaacgtcagctttcactaccccgtcaccccccagcc                                          >  VH01111:79:AACJV3JHV:2:1213:71251:45300/1‑38 (MQ=60)
                                                                                                             AAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTAAAGCGACACAATGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAACGTCAGGTTGGAGTTCCGCGTCACGCACCAGCC                                          >  VH01111:79:AACJV3JHV:1:2207:31391:22980/1‑153 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggggtgctgggccgcccaatagcgtaacaatgccgctcccactccacaacaacacgccctgggcctcaaaaaataaacaatgtcatgtttcagatacccgtaacgcaccagccattta                                     >  VH01111:79:AACJV3JHV:2:1107:21128:33052/1‑33 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggggggtgcggccccccaacccgccacaaagccccccccacaacccaacccccggccccgcgccccccaaacaaaaaaacatcaagtttccaatcagcctcacccaccccccagtta                                     >  VH01111:79:AACJV3JHV:2:2312:15580:15880/1‑33 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggcagcttcccaccccaaaagcgaaacaacgccgctccccaaccacacaaacacccccttcccctcaaatacaaaccaaagttaggtttgagaagaccgtcaccccccatcctttac                                     >  VH01111:79:AACJV3JHV:2:1403:19481:44316/1‑33 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGGTGGTGGGGAGCCCAATAGCGACACAATGCCGCTCCCACTACAGTACACCAGGCCCTTCGGCTCAAATACAAAACAATGTGAGGTTTGAGATACGCGTCACGCACCAGCCTTTTC                                     >  VH01111:79:AACJV3JHV:2:1306:34251:36857/1‑153 (MQ=15)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGGTGCTGCGCAGCCCTATAGCGACACAACGCCCCTACCACACCAGACCACCAGGCCCTGCGCCTCACAAACTAAACAAGGTGAGGTTGCAGATACGCGTCACGCACCAGCCTTTCC                                     >  VH01111:79:AACJV3JHV:2:1107:19102:32200/1‑153 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCTATCGCGACACAAGGCCGCTCCCACAACAGACCACCAGGCCCTGCGCCTCACATACTAACCAAGGTCAGGTTGCAGATCCCCGTCACGCACCAGCCTTTCC                                     >  VH01111:79:AACJV3JHV:1:1408:54682:51756/1‑153 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCTATAGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAAACAAGGTCAGGTTGCAGATACGCGTCAAGCACCACCCTTTTC                                     >  VH01111:79:AACJV3JHV:1:2305:54322:3348/1‑153 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAACGCCGCTCCCACTCCAGACCACCAGGCCCTGGGCCTCACATACTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCACCCTTTCC                                     >  VH01111:79:AACJV3JHV:1:1408:58772:51491/1‑153 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATAGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATACTAACCAAGGTCAGGTTGGAGATCCGCGTCACGCACCAGCCTTTCC                                     >  VH01111:79:AACJV3JHV:1:1210:34345:25100/1‑153 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATAGCGACACAACGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATACTAAACAAGGTCAGGTTGCAGATGCGCGTCACGCACCAGCCATTCC                                     >  VH01111:79:AACJV3JHV:1:2508:48850:25555/1‑153 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCCATAGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCACACATACAAACCAAGGTCAGGTTGCAGATCCGCGTCACCCCCCAGCCTTTCC                                     >  VH01111:79:AACJV3JHV:1:1302:20030:27751/1‑153 (MQ=60)
                                                                                                                  GCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCACCCCAATAGCGACACAAGGCCGCTCCCACACCACACCACCACGCCCTGCGCCTCAAATCCTAACCAACGTCAGGTTGCAGATACGCGTCACGCACCACCCTTTCC                                     >  VH01111:79:AACJV3JHV:1:2508:48926:24419/1‑153 (MQ=60)
                                                                                                                        GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCCGCCCTAACGCCACACAACGCCGCTCCCCCACCACACCACCACGCCCTGCGGCGCACAACCTAAACCACGTCACGTTTGAGATCCGCGTCACGCACCAGCCTTTCCAATTCG                               >  VH01111:79:AACJV3JHV:2:2502:45877:49617/1‑153 (MQ=39)
                                                                                                                        GGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATAGCGACAAAACGCCGCTCCCACACCAGACCAACACGCCCTGCGCCTAACATAATAAACAACGTCAGGTTTCAGATACGCGTAACCCACCAGCCTTTgcaattgg                               >  VH01111:79:AACJV3JHV:2:1502:35822:49636/1‑145 (MQ=43)
                                                                                                                              CATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCAACACGCCCAGCGCCACACAAACTAACCAATCTCAGGTTGCTGATCCCCGTCACCCCCCAGCCTTTACAATGCGACCAGG                         >  VH01111:79:AACJV3JHV:2:1506:62086:38864/1‑153 (MQ=53)
                                                                                                                              CATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCAATCGCGACACAAGGCCCCTCCCACACCAGACCACCAGGCCCTGCGCCTCAAATACTAACCAAGGTCAGGTTTCAGATCCGCGTCAAGCCCCAGCCTTTACAATGCGACCAGG                         >  VH01111:79:AACJV3JHV:1:1105:35349:45906/1‑153 (MQ=60)
                                                                                                                                     ACTGCTTGAACCGCGGGGGCTGCTGCGCAGCCCTTTCGCTACAAATGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTA                  <  VH01111:79:AACJV3JHV:1:1414:26014:42896/153‑1 (MQ=60)
                                                                                                                                      CTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATAGCGACAAAAGGCCGCTCCCACTCCAGACCACCACGCCCTGCGCCTCACATACTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGGGCCCAGGTCCGGTAC                 >  VH01111:79:AACJV3JHV:1:2410:39288:8762/1‑153 (MQ=60)
                                                                                                                                       TGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACCCACCAGCCTTTCCAATGCGACCAGGTCCGGTAAC                >  VH01111:79:AACJV3JHV:1:1608:66081:30250/1‑153 (MQ=60)
                                                                                                                                        GCATGAACCGCCGGGGCTGCTGCGCAGCCCAATAGCGACAAAAGGCCGCTCCCACACCAGAACACCAGGCCCTGGGCCTCACATCCAAACCAAGGTCAGGTTGGCGTTACGCGTCACGCACCAGCCATTCCAATGCGACCAGGTCCGGTACCC               >  VH01111:79:AACJV3JHV:1:2411:33550:41419/1‑153 (MQ=60)
                                                                                                                                                 GG‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTC  >  VH01111:79:AACJV3JHV:1:1209:20844:51624/1‑153 (MQ=60)
                                                                                                                                                 GG‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTC  >  VH01111:79:AACJV3JHV:2:2601:27566:32862/1‑153 (MQ=60)
                                                                                                                                                 GG‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACCCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTC  >  VH01111:79:AACJV3JHV:1:1204:68505:23737/1‑153 (MQ=60)
                                                                                                                                                  |                                                                                                                                                           
TCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTC  >  AE015451_phaM1/5681269‑5681566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑