Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F48 I1 R1
|
58 |
71.3 |
3054194 |
98.3% |
3002272 |
146.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_002947_CJ‑RC |
3,071,797 |
A→C |
D217A (GAC→GCC) |
yiaY → |
Fe‑containing alcohol dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_002947_CJ‑RC | 3,071,797 | 0 | A | C | 100.0%
| 265.2
/ NA
| 73 | D217A (GAC→GCC) | yiaY | Fe‑containing alcohol dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (41/32); total (41/32) |
AGCAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGACCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGGGCG > NC_002947_CJ‑RC/3071652‑3071940
|
aGCAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGcccc > 8:297853/1‑149 (MQ=255)
gCAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCcccc > 7:195903/1‑149 (MQ=255)
cAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGcccc < 8:155974/147‑1 (MQ=255)
cAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGcccc > 7:155974/1‑147 (MQ=255)
cAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCcccc > 7:119018/1‑148 (MQ=255)
ggtggtGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATgcgc < 8:385768/149‑1 (MQ=255)
ggtggtGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATgcgc < 6:136793/149‑1 (MQ=255)
ggtggtGCCGGACGAGTCGCAGATCGACCCGCCGCCCACCCTGAGCATGGCCCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCGTGCCATCGCGGCCTTCGTGTCTACCGGCCACGGGCCGCTGCCCGCCCCCCCTgcgc > 6:114284/1‑149 (MQ=255)
tgCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGaa < 4:253293/149‑1 (MQ=255)
ccGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAg < 7:264104/148‑1 (MQ=255)
ccGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGc > 8:80864/1‑149 (MQ=255)
cGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATgc < 7:12345/149‑1 (MQ=255)
tgtCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATgcgc < 8:69877/149‑1 (MQ=255)
tCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCt < 5:313481/149‑1 (MQ=255)
gCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGa < 7:303582/149‑1 (MQ=255)
gCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGGCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGa < 2:190473/149‑1 (MQ=255)
aTCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCaa > 8:373510/1‑149 (MQ=255)
tCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAAt < 7:348659/149‑1 (MQ=255)
tCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAAt < 4:363452/149‑1 (MQ=255)
gACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATg < 5:122153/148‑1 (MQ=255)
aCCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGc < 6:353744/149‑1 (MQ=255)
aCCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACAGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATgg > 5:320282/1‑148 (MQ=255)
ccGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCaa > 8:333510/1‑149 (MQ=255)
ccGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCaa < 1:31778/149‑1 (MQ=255)
caccCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCtggtg > 7:329417/1‑148 (MQ=255)
caccCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCtggtg < 8:329417/148‑1 (MQ=255)
accCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACAtggtg > 6:154336/1‑147 (MQ=255)
cccTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCtggtg > 8:288231/1‑146 (MQ=255)
ccTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCtggtg > 7:333769/1‑145 (MQ=255)
ggACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGcc > 1:19026/1‑148 (MQ=255)
ccGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAAccc > 5:179406/1‑149 (MQ=255)
ccGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAAccc > 5:179765/1‑149 (MQ=255)
cGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAAccc > 5:114189/1‑148 (MQ=255)
cGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAAccc > 7:266011/1‑148 (MQ=255)
gTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCCTGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTa > 3:15209/1‑149 (MQ=255)
ccTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACt < 2:19026/148‑1 (MQ=255)
tGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGa > 5:350618/1‑148 (MQ=255)
tCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGat < 1:259114/147‑1 (MQ=255)
ggCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATtg < 8:119018/149‑1 (MQ=255)
gCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATtgcgctg > 5:271198/1‑149 (MQ=255)
cACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATtgcgctgc > 7:185751/1‑149 (MQ=255)
aCCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATtgcgctgcg > 2:57876/1‑149 (MQ=255)
ccGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATtgcgctgcgc < 6:320282/149‑1 (MQ=255)
cGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATtgcgctgcgc > 8:278494/1‑148 (MQ=255)
ggCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATtgcgctgcgc > 2:13372/1‑147 (MQ=255)
ggCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCga < 1:57876/149‑1 (MQ=255)
gATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCgag > 1:63006/1‑144 (MQ=255)
cGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTTATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATg < 7:157648/149‑1 (MQ=255)
tgTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGATGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTc < 8:318706/147‑1 (MQ=255)
ggTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCg > 8:29221/1‑149 (MQ=255)
gTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCgg < 7:246979/149‑1 (MQ=255)
gCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCgg > 7:181760/1‑147 (MQ=255)
cATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGgcag > 3:123768/1‑149 (MQ=255)
tGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGgcagca > 2:172478/1‑149 (MQ=255)
ccATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCAt < 4:123768/148‑1 (MQ=255)
cATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGc < 8:79325/149‑1 (MQ=255)
aTCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAGCCTGGTGGAGATGATCGCCAACCCTACTGATATTGAGCTGCGCGAGAAGATCATGCTCGGCAGCATg > 1:218124/1‑147 (MQ=255)
tCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATg > 3:25464/1‑146 (MQ=255)
tCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATg < 4:25464/146‑1 (MQ=255)
gCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCggg > 8:101719/1‑149 (MQ=255)
cGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCt < 7:101719/147‑1 (MQ=255)
gtgtCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGc < 6:114189/149‑1 (MQ=255)
tCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGtt > 3:239451/1‑149 (MQ=255)
tACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTtct > 7:170844/1‑149 (MQ=255)
tACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTtct > 8:299626/1‑149 (MQ=255)
ccGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTtc < 1:242013/146‑1 (MQ=255)
cGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTcc > 5:71391/1‑148 (MQ=255)
ggCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCaa > 8:270675/1‑149 (MQ=255)
ggCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCaa > 2:248226/1‑149 (MQ=255)
gCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAAt < 3:183752/149‑1 (MQ=255)
ccACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATg < 4:119057/149‑1 (MQ=255)
ccACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATg < 7:337278/149‑1 (MQ=255)
cACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGc > 3:15732/1‑149 (MQ=255)
cGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTg > 3:317889/1‑149 (MQ=255)
cGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTg > 3:313011/1‑149 (MQ=255)
cGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTg > 7:111208/1‑149 (MQ=255)
accgcccCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCg < 6:360878/117‑1 (MQ=255)
accgcccCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCg > 5:360878/1‑117 (MQ=255)
accgcccCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGGgcg < 7:80864/148‑1 (MQ=255)
|
AGCAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGACCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGGGCG > NC_002947_CJ‑RC/3071652‑3071940
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGACCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGGGCGCAGTGC > NC_002947_CJ‑RC/3071652‑3071946
|
AGCAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCC > NB501016:282:H2V7GAFX2:4:11612:2158:13529/1‑151 (MQ=60)
GCAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCC > NB501016:282:H2V7GAFX2:4:11510:15477:4839/1‑150 (MQ=60)
GCAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCC > NB501016:282:H2V7GAFX2:4:11605:7252:3682/1‑149 (MQ=60)
GCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGC < NB501016:282:H2V7GAFX2:4:21412:7519:15919/150‑1 (MQ=60)
ACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCG < NB501016:282:H2V7GAFX2:4:11403:14021:5094/151‑1 (MQ=60)
GTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTG < NB501016:282:H2V7GAFX2:3:21512:17820:11441/151‑1 (MQ=60)
CGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGAT < NB501016:282:H2V7GAFX2:4:21507:20281:19014/151‑1 (MQ=60)
ATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATG < NB501016:282:H2V7GAFX2:4:21604:10550:7414/151‑1 (MQ=60)
CGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGG < NB501016:282:H2V7GAFX2:3:11512:16264:3296/150‑1 (MQ=60)
GACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACAGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGC > NB501016:282:H2V7GAFX2:3:21601:13250:15632/1‑150 (MQ=60)
CCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAAC < NB501016:282:H2V7GAFX2:1:11106:8818:8878/151‑1 (MQ=60)
CCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGG > NB501016:282:H2V7GAFX2:4:21512:4661:12336/1‑150 (MQ=60)
CCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGG > NB501016:282:H2V7GAFX2:4:21601:20964:9158/1‑147 (MQ=60)
TGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCA > NB501016:282:H2V7GAFX2:1:11104:14911:5140/1‑150 (MQ=60)
CCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCT > NB501016:282:H2V7GAFX2:3:11610:16409:4640/1‑151 (MQ=60)
CCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCT > NB501016:282:H2V7GAFX2:3:11610:22789:3512/1‑151 (MQ=60)
CCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCT > NB501016:282:H2V7GAFX2:4:21501:12255:3289/1‑150 (MQ=60)
CCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCT > NB501016:282:H2V7GAFX2:3:11510:19745:13858/1‑150 (MQ=60)
CGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCCTGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTAC > NB501016:282:H2V7GAFX2:2:11103:14605:19567/1‑151 (MQ=60)
CTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGAT > NB501016:282:H2V7GAFX2:3:21607:25325:2701/1‑150 (MQ=60)
GTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATA < NB501016:282:H2V7GAFX2:1:21112:20551:11249/149‑1 (MQ=60)
TGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGC > NB501016:282:H2V7GAFX2:3:21504:10405:8700/1‑151 (MQ=60)
GCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCG > NB501016:282:H2V7GAFX2:4:11610:24471:15465/1‑151 (MQ=60)
CGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAG < NB501016:282:H2V7GAFX2:1:11110:4477:20354/151‑1 (MQ=60)
CGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGA > NB501016:282:H2V7GAFX2:1:11111:20343:18613/1‑146 (MQ=60)
GCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTTATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGC < NB501016:282:H2V7GAFX2:4:11605:10423:9799/151‑1 (MQ=60)
GGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGC < NB501016:282:H2V7GAFX2:4:21409:25070:16652/151‑1 (MQ=60)
TGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGC > NB501016:282:H2V7GAFX2:4:11610:15863:1052/1‑149 (MQ=60)
GCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGC > NB501016:282:H2V7GAFX2:2:11212:23182:6159/1‑151 (MQ=60)
CATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAGCCTGGTGGAGATGATCGCCAACCCTACTGATATTGAGCTGCGCGAGAAGATCATGCTCGGCAGCATGC > NB501016:282:H2V7GAFX2:1:21104:25430:14790/1‑149 (MQ=60)
ATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGC > NB501016:282:H2V7GAFX2:2:11105:20251:19056/1‑148 (MQ=60)
TCGTGTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTG < NB501016:282:H2V7GAFX2:4:11507:17242:3022/149‑1 (MQ=60)
GTCTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTC > NB501016:282:H2V7GAFX2:2:21109:6876:19794/1‑151 (MQ=60)
CTACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTC > NB501016:282:H2V7GAFX2:4:11607:16960:19180/1‑151 (MQ=60)
ACCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCT < NB501016:282:H2V7GAFX2:1:21109:12399:6520/148‑1 (MQ=60)
CCGGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCA > NB501016:282:H2V7GAFX2:3:11502:2538:19078/1‑150 (MQ=60)
GGCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATG < NB501016:282:H2V7GAFX2:2:11310:5543:19098/151‑1 (MQ=60)
GCCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGC < NB501016:282:H2V7GAFX2:4:21602:7758:3650/151‑1 (MQ=60)
CCACGGGCCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCG > NB501016:282:H2V7GAFX2:2:11104:5710:2426/1‑151 (MQ=60)
CCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGG > NB501016:282:H2V7GAFX2:4:11508:11565:16644/1‑151 (MQ=60)
CCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGG > NB501016:282:H2V7GAFX2:2:21303:26773:8409/1‑151 (MQ=60)
CCGCTGACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGG > NB501016:282:H2V7GAFX2:2:21302:1169:8415/1‑151 (MQ=60)
GACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGGGCGC < NB501016:282:H2V7GAFX2:4:11503:4104:7346/150‑1 (MQ=60)
GACCGCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGG > NB501016:282:H2V7GAFX2:3:21608:8158:19367/1‑119 (MQ=60)
GCCCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGGGCGCAGTGC < NB501016:282:H2V7GAFX2:4:21506:12893:15038/151‑1 (MQ=60)
|
AGCAAGGCGGTGGTGCCGGACGTGTCGCTGATCGACCCGCAGACCACCCTGAGCATGGACCCGTTCCTGTCGGCCTGCACCGGCATCGATGCGTTGGTGCATGCCATCGAGGCCTTCGTGTCTACCGGCCACGGGCCGCTGACCGACCCCCATGCGCTGGAAGCCATGCGCCTGATCAATGGCAACCTGGTGGAGATGATCGCCAACCCTACTGATATTGCGCTGCGCGAGAAGATCATGCTCGGCAGCATGCAGGCGGGGCTGGCGTTCTCCAATGCGATCCTGGGCGCAGTGC > NC_002947_CJ‑RC/3071652‑3071946
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
