Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F18 I1 R1
|
59 |
77.7 |
3515218 |
98.5% |
3462489 |
145.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_002947_CJ‑RC |
4,888,617 |
C→T |
intergenic (‑230/‑28) |
PP_4296 ← / → gcl |
hypothetical protein/glyoxylate carboligase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_002947_CJ‑RC | 4,888,617 | 0 | C | T | 97.4%
| 260.7
/ ‑5.6
| 78 | intergenic (‑230/‑28) | PP_4296/gcl | hypothetical protein/glyoxylate carboligase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (37/39); minor base A (0/2); total (37/41) |
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TATACAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATACAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGCCCTGAAAAAA > NC_002947_CJ‑RC/4888473‑4888761
|
tataCAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAAt > 7:244137/1‑148 (MQ=255)
aCAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTAc > 6:211522/1‑148 (MQ=255)
aCAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTAc > 8:150221/1‑148 (MQ=255)
aaTATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACaa > 1:26583/1‑148 (MQ=255)
atatTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACaaaa > 1:190801/1‑149 (MQ=255)
tatTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAAt > 1:286089/1‑149 (MQ=255)
tatTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTACACGGGCGCTCTGAAGAAAGCCAGCTTAGCCTATGAACACCCATTGACCTAAGGCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAAt > 6:128148/1‑149 (MQ=255)
tGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACaa > 1:26736/1‑141 (MQ=255)
tGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACaa < 4:401227/141‑1 (MQ=255)
tGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACaa < 2:26736/141‑1 (MQ=255)
tGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACaa > 3:401227/1‑141 (MQ=255)
tGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGAt < 5:233576/148‑1 (MQ=255)
tGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGAt < 6:314731/148‑1 (MQ=255)
aCGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGc < 3:9948/149‑1 (MQ=255)
cGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGca < 2:286089/149‑1 (MQ=255)
tATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCTAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAAc > 3:215783/1‑148 (MQ=255)
tATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAAc > 1:153668/1‑148 (MQ=255)
gcgcAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCaa > 6:208426/1‑148 (MQ=255)
cgcAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCaaaa < 8:324383/149‑1 (MQ=255)
gcAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAAt > 7:381305/1‑149 (MQ=255)
gcAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAAt > 8:115552/1‑149 (MQ=255)
cAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATg < 3:211294/149‑1 (MQ=255)
aaaCCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAAt > 2:358779/1‑147 (MQ=255)
aaaCCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATga < 7:141541/149‑1 (MQ=255)
aaaCCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATga < 3:284090/149‑1 (MQ=255)
aaaCCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATga < 8:244137/149‑1 (MQ=255)
aCCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTTAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAAATACAAAATCGATGAGGCACAAACCATGAGCAAAATgaga < 3:241851/149‑1 (MQ=255)
aCCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATgaga < 3:238238/149‑1 (MQ=255)
ccTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGagag < 5:211522/149‑1 (MQ=255)
cTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGagag > 5:352435/1‑148 (MQ=255)
ccGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCaa > 8:30704/1‑149 (MQ=255)
cGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAAt < 4:108742/149‑1 (MQ=255)
cGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAAt > 6:58985/1‑149 (MQ=255)
ttCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGa < 2:190801/148‑1 (MQ=255)
cccgcgcgaTCTGAAGATCGCCAGCTAAGCCGATCCAACCCCATTTACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGCTGTATAAAAATCCAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGAt < 4:354776/142‑1 (MQ=255)
cGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAg < 8:78966/149‑1 (MQ=255)
ggCGCTCTGACGAAAGCTAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGcc < 4:215783/149‑1 (MQ=255)
tctGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATga > 1:14263/1‑127 (MQ=255)
tctGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATga < 2:14263/127‑1 (MQ=255)
aCGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAAATACAAAATCGATGAGGCACAAACCATGACCAAAATGAGAGCAATCGATGCAGCCGTTCTg < 8:237039/146‑1 (MQ=255)
gAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCAt > 6:54862/1‑149 (MQ=255)
aaGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATgc < 6:111268/149‑1 (MQ=255)
aGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATgcg > 5:215974/1‑149 (MQ=255)
cAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCg > 4:317520/1‑149 (MQ=255)
aGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGaa < 2:69650/147‑1 (MQ=255)
aGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAg < 8:439351/148‑1 (MQ=255)
aGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAg < 6:377241/148‑1 (MQ=255)
gATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGgtg > 3:60268/1‑147 (MQ=255)
gATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGgtg > 7:123254/1‑147 (MQ=255)
tGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGgtg > 6:158723/1‑145 (MQ=255)
gAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGa > 4:176303/1‑148 (MQ=255)
ttGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTc < 5:58985/149‑1 (MQ=255)
aCCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCgg < 8:218147/148‑1 (MQ=255)
cTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCAt > 1:308566/1‑149 (MQ=255)
tCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCggggg < 2:343079/149‑1 (MQ=255)
tCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCgaggg > 2:409639/1‑149 (MQ=255)
aGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCt < 3:176303/149‑1 (MQ=255)
aGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCt < 7:123642/149‑1 (MQ=255)
gCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGc < 6:215974/149‑1 (MQ=255)
aaTACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCgg < 3:151092/129‑1 (MQ=255)
aaTACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCgg > 4:151092/1‑129 (MQ=255)
tACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAAc < 8:350732/149‑1 (MQ=255)
acacTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAAcc > 2:42722/1‑149 (MQ=255)
cacTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAAccc < 1:358779/149‑1 (MQ=255)
cacTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAAcc < 5:54862/148‑1 (MQ=255)
acTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCa > 7:345329/1‑141 (MQ=255)
acTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCa < 8:345329/141‑1 (MQ=255)
acTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCg > 7:411772/1‑149 (MQ=255)
acTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCg > 5:282984/1‑149 (MQ=255)
tGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGTCATCCCGGGGGCTGCCATCAACCCGTTg > 5:300731/1‑148 (MQ=255)
tCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTg < 8:411772/146‑1 (MQ=255)
tCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTa < 5:351449/148‑1 (MQ=255)
gCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGTCATCCCGGGGGCTGCCATCAACCCGTTGTAtt < 6:300731/148‑1 (MQ=255)
gCAAAGCAAGTTGTATAAAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTAtt < 2:26583/148‑1 (MQ=255)
aaaGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCgg > 5:93061/1‑149 (MQ=255)
aaaGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCgg > 8:356308/1‑149 (MQ=255)
aaGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGc > 7:435385/1‑149 (MQ=255)
aGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGACATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGcc < 7:115552/149‑1 (MQ=255)
tatataATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGCCCTGaaaaaa < 6:348985/149‑1 (MQ=255)
|
TATACAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATACAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGCCCTGAAAAAA > NC_002947_CJ‑RC/4888473‑4888761
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTTTGTATACAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATACAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGCCCTGAAAAAAGTCGGT > NC_002947_CJ‑RC/4888467‑4888767
|
TTTTTGTATACAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATAT > NB501016:282:H2V7GAFX2:3:21504:19169:10764/1‑151 (MQ=60)
TTTTGTATACAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATAT < NB501016:282:H2V7GAFX2:2:21108:26718:11147/150‑1 (MQ=60)
TTTTGTATACAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATAT < NB501016:282:H2V7GAFX2:2:21107:1128:11157/150‑1 (MQ=60)
GTATACAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATT > NB501016:282:H2V7GAFX2:4:21403:24393:10335/1‑150 (MQ=60)
CAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAA > NB501016:282:H2V7GAFX2:1:11105:15795:1450/1‑150 (MQ=60)
AATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAAT > NB501016:282:H2V7GAFX2:1:11307:12227:10630/1‑151 (MQ=60)
ATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATC > NB501016:282:H2V7GAFX2:1:21110:8500:19905/1‑151 (MQ=60)
TTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATG < NB501016:282:H2V7GAFX2:3:21402:17381:13109/150‑1 (MQ=60)
TTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAA > NB501016:282:H2V7GAFX2:2:21309:20810:4133/1‑143 (MQ=60)
TTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAA > NB501016:282:H2V7GAFX2:1:11105:14560:1917/1‑143 (MQ=60)
AACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCA < NB501016:282:H2V7GAFX2:2:11102:5824:14422/151‑1 (MQ=60)
GTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCTAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACC > NB501016:282:H2V7GAFX2:2:11311:4166:16639/1‑150 (MQ=60)
GTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACC > NB501016:282:H2V7GAFX2:1:11301:11611:4135/1‑150 (MQ=60)
CGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATG > NB501016:282:H2V7GAFX2:4:21512:4316:10465/1‑151 (MQ=60)
GCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGA < NB501016:282:H2V7GAFX2:2:11311:12125:3080/151‑1 (MQ=60)
CAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAG < NB501016:282:H2V7GAFX2:4:11510:9297:15457/151‑1 (MQ=60)
CAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAG < NB501016:282:H2V7GAFX2:2:21111:19583:11684/151‑1 (MQ=60)
AAGCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTTAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAAATACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAG < NB501016:282:H2V7GAFX2:2:21104:18165:6105/151‑1 (MQ=60)
AACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAG < NB501016:282:H2V7GAFX2:2:21103:18990:12718/151‑1 (MQ=60)
ACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGC < NB501016:282:H2V7GAFX2:3:11610:9330:19847/151‑1 (MQ=60)
CCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGC > NB501016:282:H2V7GAFX2:3:21510:8877:18373/1‑150 (MQ=60)
CTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAG > NB501016:282:H2V7GAFX2:1:11103:2726:4034/1‑129 (MQ=60)
AAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGC > NB501016:282:H2V7GAFX2:3:11611:16176:13822/1‑151 (MQ=60)
CGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGT > NB501016:282:H2V7GAFX2:2:11111:14394:3061/1‑149 (MQ=60)
CGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGT > NB501016:282:H2V7GAFX2:4:11507:24231:18665/1‑149 (MQ=60)
ATTGACCTAAGCCGTCAGTCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCG < NB501016:282:H2V7GAFX2:3:11410:25100:16941/151‑1 (MQ=60)
CCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATC > NB501016:282:H2V7GAFX2:1:21202:16966:15535/1‑151 (MQ=60)
CAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTG < NB501016:282:H2V7GAFX2:2:11305:15483:15777/151‑1 (MQ=60)
CAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTG < NB501016:282:H2V7GAFX2:4:11507:19259:19908/151‑1 (MQ=60)
GAATACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGC < NB501016:282:H2V7GAFX2:2:11301:25451:16685/131‑1 (MQ=60)
ACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCG < NB501016:282:H2V7GAFX2:1:21210:12719:20034/151‑1 (MQ=60)
ACACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCC < NB501016:282:H2V7GAFX2:3:11410:7795:3756/150‑1 (MQ=60)
CACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGT > NB501016:282:H2V7GAFX2:3:21411:15006:4646/1‑151 (MQ=60)
CACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGT > NB501016:282:H2V7GAFX2:4:21605:7184:12082/1‑151 (MQ=60)
CACTCTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCAT > NB501016:282:H2V7GAFX2:4:21506:13798:18780/1‑143 (MQ=60)
CTGTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGTCATCCCGGGGGCTGCCATCAACCCGTTGT > NB501016:282:H2V7GAFX2:3:21502:6504:4401/1‑150 (MQ=60)
GTCGCAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTAT < NB501016:282:H2V7GAFX2:3:21510:4257:15240/150‑1 (MQ=60)
CAAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGC > NB501016:282:H2V7GAFX2:3:11504:18927:8186/1‑151 (MQ=60)
AAAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGCC > NB501016:282:H2V7GAFX2:4:21609:11776:10079/1‑151 (MQ=60)
AAGCAAGTTGTATATAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGACATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGCCC < NB501016:282:H2V7GAFX2:4:11506:1872:14781/151‑1 (MQ=60)
TAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCATCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGCCCTGAAAAAAGTCGGT > NB501016:282:H2V7GAFX2:1:11103:20417:14626/1‑151 (MQ=60)
|
TTTTTGTATACAATATTTTGAAACGATCGTATGCGATGGCGCAAACCTCCGTTTTCACGGGCGCTCTGACGAAAGCCAGCTTAGCCGATGAAAACCCATTGACCTAAGCCGTCAGGCGTGAATACACTCTGTCGCAAAGCAAGTTGTATACAATTACAAAATCGATGAGGCACAAACCATGAGCAAAATGAGAGCAATCGATGCAGCCGTTCTGGTCATGCGCCGTGAAGGTGTAGATACCGCGTTCGGCATCCCGGGGGCTGCCATCAACCCGTTGTATTCGGCCCTGAAAAAAGTCGGT > NC_002947_CJ‑RC/4888467‑4888767
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
