Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F11 I1 R1
|
56 |
91.5 |
3907174 |
98.4% |
3844659 |
146.2 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCAT > NC_002947_CJ‑RC/699574‑699870
|
GAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCT < NB501016:282:H2V7GAFX2:4:11605:15628:3859/151‑1 (MQ=32)
GGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTG > NB501016:282:H2V7GAFX2:4:11603:21363:15394/1‑150 (MQ=32)
GTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGA > NB501016:282:H2V7GAFX2:1:11210:21846:17547/1‑150 (MQ=32)
CAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACA < NB501016:282:H2V7GAFX2:1:21306:2913:15425/151‑1 (MQ=32)
AGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACAC > NB501016:282:H2V7GAFX2:3:21502:11381:13933/1‑151 (MQ=32)
GGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACC > NB501016:282:H2V7GAFX2:4:21505:1803:14593/1‑149 (MQ=32)
CGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTC > NB501016:282:H2V7GAFX2:3:11512:11086:15560/1‑151 (MQ=31)
CGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTC < NB501016:282:H2V7GAFX2:4:11411:9155:5533/151‑1 (MQ=32)
CGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTT > NB501016:282:H2V7GAFX2:1:21304:20132:8293/1‑150 (MQ=32)
ATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCAC < NB501016:282:H2V7GAFX2:3:11610:24816:14544/151‑1 (MQ=31)
CGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCT < NB501016:282:H2V7GAFX2:2:11109:8336:10159/151‑1 (MQ=60)
CGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCT < NB501016:282:H2V7GAFX2:3:21512:15217:20355/151‑1 (MQ=60)
CGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCT < NB501016:282:H2V7GAFX2:3:11604:20444:9426/151‑1 (MQ=32)
GGCTCCACCACTTTCGCCGTACGCAGTTACTTTTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTG < NB501016:282:H2V7GAFX2:1:21206:15920:7520/150‑1 (MQ=32)
GGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCAC > NB501016:282:H2V7GAFX2:3:21501:4449:6574/1‑142 (MQ=60)
GGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTG < NB501016:282:H2V7GAFX2:3:21601:10438:14230/150‑1 (MQ=32)
GGCTCCACCACTTTCGACGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTG < NB501016:282:H2V7GAFX2:2:11203:5937:11309/150‑1 (MQ=60)
GCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGA < NB501016:282:H2V7GAFX2:4:11412:10598:16176/151‑1 (MQ=32)
CTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGAT > NB501016:282:H2V7GAFX2:4:11608:21276:4186/1‑151 (MQ=31)
CTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGAT > NB501016:282:H2V7GAFX2:2:21307:10042:17838/1‑151 (MQ=32)
CCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCA < NB501016:282:H2V7GAFX2:4:21412:10730:6584/151‑1 (MQ=60)
CCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATC > NB501016:282:H2V7GAFX2:1:21103:18328:13765/1‑150 (MQ=32)
ACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGG > NB501016:282:H2V7GAFX2:3:21508:17204:19408/1‑151 (MQ=60)
CCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGC < NB501016:282:H2V7GAFX2:2:11203:20522:10293/151‑1 (MQ=32)
CCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGC < NB501016:282:H2V7GAFX2:2:21303:18710:4997/151‑1 (MQ=32)
CTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAACGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTA > NB501016:282:H2V7GAFX2:3:21410:19182:14306/1‑150 (MQ=31)
TTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAG < NB501016:282:H2V7GAFX2:1:11309:17272:9047/150‑1 (MQ=32)
TTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAA < NB501016:282:H2V7GAFX2:1:11309:25740:3377/118‑1 (MQ=36)
TCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGG < NB501016:282:H2V7GAFX2:2:11206:7089:19478/150‑1 (MQ=32)
TCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGG < NB501016:282:H2V7GAFX2:2:11208:1538:12372/150‑1 (MQ=32)
TCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGG < NB501016:282:H2V7GAFX2:1:11212:10953:19489/150‑1 (MQ=32)
GCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCAC > NB501016:282:H2V7GAFX2:3:11403:23116:12203/1‑127 (MQ=60)
CCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AA > NB501016:282:H2V7GAFX2:3:21506:24206:14700/1‑150 (MQ=32)
CGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGTAAAAATTT > NB501016:282:H2V7GAFX2:3:21409:22953:10723/1‑151 (MQ=31)
GCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGT > NB501016:282:H2V7GAFX2:1:11105:8131:19952/1‑151 (MQ=31)
GCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGT < NB501016:282:H2V7GAFX2:3:21504:18718:7526/151‑1 (MQ=32)
GCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGT < NB501016:282:H2V7GAFX2:2:11103:5985:8481/151‑1 (MQ=32)
CAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTG < NB501016:282:H2V7GAFX2:3:21511:17891:11888/151‑1 (MQ=31)
CAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTG < NB501016:282:H2V7GAFX2:2:11107:13287:15848/151‑1 (MQ=31)
CAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTG < NB501016:282:H2V7GAFX2:1:21312:21059:15055/151‑1 (MQ=31)
CAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTG < NB501016:282:H2V7GAFX2:1:11211:19510:10098/151‑1 (MQ=31)
ACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTC < NB501016:282:H2V7GAFX2:4:21509:20970:8314/151‑1 (MQ=21)
CTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCT > NB501016:282:H2V7GAFX2:1:11112:5820:20111/1‑151 (MQ=21)
TGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGC > NB501016:282:H2V7GAFX2:2:11209:3109:11021/1‑151 (MQ=22)
TGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGC > NB501016:282:H2V7GAFX2:2:11303:3269:12085/1‑151 (MQ=22)
GTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTAAGTTCTGCT > NB501016:282:H2V7GAFX2:4:21410:24544:8306/1‑151 (MQ=20)
TCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCT > NB501016:282:H2V7GAFX2:1:21301:14381:10071/1‑150 (MQ=21)
ACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAG < NB501016:282:H2V7GAFX2:4:21611:8059:17792/151‑1 (MQ=21)
CTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAA > NB501016:282:H2V7GAFX2:2:11107:7505:6359/1‑148 (MQ=22)
TTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAG > NB501016:282:H2V7GAFX2:2:21305:10354:10795/1‑149 (MQ=21)
TTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAG > NB501016:282:H2V7GAFX2:2:21308:21143:17298/1‑149 (MQ=22)
TAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAG < NB501016:282:H2V7GAFX2:4:21604:22246:16067/150‑1 (MQ=21)
TAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAG < NB501016:282:H2V7GAFX2:3:21603:19812:19766/150‑1 (MQ=21)
TAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGC‑AAAATTTGTGAGTTCTGCTCGAAAGA < NB501016:282:H2V7GAFX2:1:11312:10600:6715/149‑1 (MQ=21)
AATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACG < NB501016:282:H2V7GAFX2:3:21505:11110:9866/151‑1 (MQ=21)
AATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACG < NB501016:282:H2V7GAFX2:2:21206:24469:2391/151‑1 (MQ=21)
AACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACG < NB501016:282:H2V7GAFX2:4:11404:6064:8634/151‑1 (MQ=21)
AACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTAC < NB501016:282:H2V7GAFX2:3:11404:6355:11776/150‑1 (MQ=22)
AGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTC > NB501016:282:H2V7GAFX2:4:21610:3785:1232/1‑151 (MQ=0)
AGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTC < NB501016:282:H2V7GAFX2:2:11302:11109:1781/151‑1 (MQ=0)
CTCGAATGTTGATTTCTGGCTTTTGTCATATCGTTATTTAAAAATTCGGATATGTGATAGATATAGGATGAACACCAGTTTAACTTCTGGTTTATCAGTATAAGTT‑AAAATTTGTGAGTTCTGATCTAAATAGAAACGTACGAATTTTCGG > NB501016:282:H2V7GAFX2:4:11608:17043:3911/1‑151 (MQ=0)
CGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGC < NB501016:282:H2V7GAFX2:2:11204:22292:19945/150‑1 (MQ=0)
GTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATG < NB501016:282:H2V7GAFX2:4:11407:10325:5665/150‑1 (MQ=0)
TTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTC > NB501016:282:H2V7GAFX2:4:11506:15317:17260/1‑151 (MQ=0)
TTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCT > NB501016:282:H2V7GAFX2:2:21109:2892:2962/1‑151 (MQ=0)
TTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTT > NB501016:282:H2V7GAFX2:2:21307:1445:14121/1‑151 (MQ=0)
TTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCT < NB501016:282:H2V7GAFX2:2:21302:12003:10736/150‑1 (MQ=0)
CTTTTGTCAGATCGTTCTTTAAAAAATCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGT > NB501016:282:H2V7GAFX2:2:21307:13525:11001/1‑151 (MQ=0)
TGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAAGACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATA < NB501016:282:H2V7GAFX2:1:21107:8444:5430/150‑1 (MQ=0)
AGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAG < NB501016:282:H2V7GAFX2:3:11505:1138:17247/151‑1 (MQ=0)
AATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACC > NB501016:282:H2V7GAFX2:4:11403:19934:4930/1‑148 (MQ=0)
ATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGAT < NB501016:282:H2V7GAFX2:1:11102:20538:7741/151‑1 (MQ=0)
GTTCTTTAAAAATTCTGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAATGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGC < NB501016:282:H2V7GAFX2:3:11405:3321:12530/151‑1 (MQ=0)
CTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTG > NB501016:282:H2V7GAFX2:4:21503:19654:10279/1‑151 (MQ=0)
AAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGG < NB501016:282:H2V7GAFX2:2:11208:14285:19648/150‑1 (MQ=0)
AAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGG < NB501016:282:H2V7GAFX2:3:11603:17960:2279/150‑1 (MQ=0)
AATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTAT < NB501016:282:H2V7GAFX2:1:21109:11965:13505/151‑1 (MQ=0)
ATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATA < NB501016:282:H2V7GAFX2:2:11104:19335:18786/151‑1 (MQ=0)
GGATATGTGATAGATATAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTT > NB501016:282:H2V7GAFX2:1:21306:11956:7305/1‑117 (MQ=0)
ATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCA < NB501016:282:H2V7GAFX2:4:21501:8422:11340/151‑1 (MQ=0)
ATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTC < NB501016:282:H2V7GAFX2:1:21201:3040:13660/150‑1 (MQ=0)
ATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAG < NB501016:282:H2V7GAFX2:4:11605:4183:11084/151‑1 (MQ=0)
TGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTG > NB501016:282:H2V7GAFX2:1:21302:5768:3550/1‑150 (MQ=0)
GATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGA > NB501016:282:H2V7GAFX2:1:11203:23496:7947/1‑150 (MQ=0)
ATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAG < NB501016:282:H2V7GAFX2:2:21211:9738:16756/151‑1 (MQ=0)
GATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGA > NB501016:282:H2V7GAFX2:3:21407:25912:15032/1‑149 (MQ=0)
TATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCG > NB501016:282:H2V7GAFX2:3:11506:12571:5005/1‑151 (MQ=0)
TATAGACTGAACACCAGTTTCACTGCCGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCG > NB501016:282:H2V7GAFX2:4:11403:3161:16446/1‑151 (MQ=0)
ATAGGCTGAACACCAGTTTCACTTCTTGTGGATCAGTCTAAGGT‑ATATTTTGTGAGTTCTGCTCGAAAGAGCTTAGTACGAATTTTCGGAGAATGTCGTCTTCAGAGTATAAGCTGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCG < NB501016:282:H2V7GAFX2:2:11102:12065:6614/150‑1 (MQ=0)
ATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGC < NB501016:282:H2V7GAFX2:3:21504:2470:5506/151‑1 (MQ=0)
ATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCG < NB501016:282:H2V7GAFX2:1:11207:5397:8966/150‑1 (MQ=0)
TAGGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGC > NB501016:282:H2V7GAFX2:2:21102:9098:18709/1‑150 (MQ=0)
AGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCAT > NB501016:282:H2V7GAFX2:1:11107:1182:3393/1‑151 (MQ=0)
GGCTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCAT > NB501016:282:H2V7GAFX2:4:11612:20609:6401/1‑150 (MQ=0)
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GAGGTCAGCGGTTCGATCCCGCTTGGCTCCACCACTTTCGCCGTACGCAGTTACTTGTCAGAACTTAGAAATGAACATTCAGCTCGAATGTTGATTTCTGGCTTTTGTCAGATCGTTCTTTAAAAATTCGGATATGTGATAGATATAGACTGAACACCAGTTTCACTGCTGGTGGATCAGGCTAAGGT‑AAAATTTGTGAGTTCTGCTCGAAAGAGCAACGTACGAATTTTCGGCGAATGTCGTCTTCACAGTATAACCAGATTGCTTGGGGTTATATGGTCAAGTGAAGAAGCGCAT > NC_002947_CJ‑RC/699574‑699870
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
