Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F67 I1 R1
|
9 |
413.0 |
13223691 |
96.9% |
12813756 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,428,520 |
A→G |
M36T (ATG→ACG) |
ubiX ← |
3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,428,520 | 0 | A | G | 99.2%
| 1493.3
/ ‑2.3
| 387 | M36T (ATG→ACG) | ubiX | 3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (203/180); total (205/182) |
| Fisher's exact test for biased strand distribution p-value = 6.04e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 393 total aligned reads displayed.
TAAAATCACCATCCCCAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCATCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAGACTTGCAGGCAGACTTTGCAGG > NC_000913/2428372‑2428666
|
tAAAATCACCATCCCCAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCtcgtc > 3:755147/1‑151 (MQ=255)
aaTCACCATCCCCAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCAcc < 2:953728/151‑1 (MQ=255)
aCCATCCCCAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCAcc > 5:1020442/1‑147 (MQ=255)
ccATCCCCAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATg > 3:809639/1‑151 (MQ=255)
aTCCCCAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCg > 4:231753/1‑151 (MQ=255)
ccccAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGtt < 6:1592126/151‑1 (MQ=255)
ccccAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGt < 4:965052/150‑1 (MQ=255)
cccAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGttt < 4:1126298/151‑1 (MQ=255)
cccAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGttt > 1:877029/1‑151 (MQ=255)
ccAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTc < 3:1397003/151‑1 (MQ=255)
cAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCg < 3:444699/151‑1 (MQ=255)
aGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCg > 6:1548230/1‑150 (MQ=255)
cGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGat > 5:536764/1‑150 (MQ=255)
gTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGatat < 8:253327/151‑1 (MQ=255)
gTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTATCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCTTCACCAGATGCGTTTCGctat > 6:73158/1‑151 (MQ=255)
tCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATc > 5:994442/1‑151 (MQ=255)
tGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCtg > 7:886442/1‑151 (MQ=255)
ggAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCtgt > 3:523009/1‑151 (MQ=255)
ggAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGGGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATc < 2:1403293/148‑1 (MQ=255)
aaaGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCtgtg > 3:267579/1‑150 (MQ=255)
gAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACAt > 4:831380/1‑151 (MQ=255)
cGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCCCCAGATGCGTTTCGATATCTGTGACATcgcg > 2:1519871/1‑151 (MQ=255)
ggAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCgcgc > 5:1601138/1‑151 (MQ=255)
agagATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGCCATCgcgc > 7:257685/1‑148 (MQ=255)
agagATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCgcgc > 8:800943/1‑148 (MQ=255)
agagATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGa < 7:1018633/151‑1 (MQ=255)
agaTGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAAc < 3:1104486/151‑1 (MQ=255)
agaTGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAAc > 7:489073/1‑151 (MQ=255)
aTGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCt > 6:210148/1‑151 (MQ=255)
ggcggcAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGtaat > 8:1277116/1‑151 (MQ=255)
ggcggcAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGtaat < 5:140035/151‑1 (MQ=255)
ggcggcAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGtaa < 3:927092/150‑1 (MQ=255)
cggcAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGtaata > 4:1363662/1‑150 (MQ=255)
ggcAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAg < 7:1512398/151‑1 (MQ=255)
gcAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAgc > 4:308039/1‑151 (MQ=255)
gcAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAgc < 4:154429/151‑1 (MQ=255)
gcAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAgc > 7:591869/1‑151 (MQ=255)
aaTATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGCCATCGCGCAGAACCTGTAATAAgcgc > 5:811161/1‑151 (MQ=255)
aaTATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAgcgc > 2:24666/1‑151 (MQ=255)
aaTATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAgcgc < 1:1483840/151‑1 (MQ=255)
aaTATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAgcgc > 8:654782/1‑151 (MQ=255)
atCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGGTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTCACATCGCGCAGAACCTGTAATAAGCGCACg > 1:473935/1‑151 (MQ=255)
gcgcgcATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGcc > 2:1173612/1‑150 (MQ=255)
gcgcgcATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCa < 8:344903/151‑1 (MQ=255)
gcgcATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATa < 6:890553/151‑1 (MQ=255)
gcgcATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATa < 4:721314/151‑1 (MQ=255)
gcATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATaaa < 5:895538/151‑1 (MQ=255)
gcATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATaa > 6:138873/1‑150 (MQ=255)
cATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAAt < 7:1091166/151‑1 (MQ=255)
cgtgcgtgACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATcg < 7:1447901/150‑1 (MQ=255)
gtgcgtgACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATcgcg > 2:420926/1‑151 (MQ=255)
gtgcgtgACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATcgcg < 7:474381/151‑1 (MQ=255)
gcgtgACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGcgcc > 3:29410/1‑151 (MQ=255)
cgtgACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGcgccg > 1:164979/1‑151 (MQ=255)
tgACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCt > 1:1533352/1‑151 (MQ=255)
taCATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTg > 6:387641/2‑151 (MQ=255)
gACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTg < 8:1008152/151‑1 (MQ=255)
cGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCAcc < 6:1112707/151‑1 (MQ=255)
ggCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCg > 1:1209228/1‑151 (MQ=255)
ggCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCg > 2:285829/1‑151 (MQ=255)
aaTGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTg > 8:141947/1‑150 (MQ=255)
aaTGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTACCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCt < 4:491364/149‑1 (MQ=255)
aTGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGAt > 7:326562/1‑151 (MQ=255)
cTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCt > 6:333692/1‑151 (MQ=255)
gCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTAc < 5:405014/151‑1 (MQ=255)
gCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTAc < 3:672554/151‑1 (MQ=255)
gCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTAc > 2:1252645/1‑151 (MQ=255)
cACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTAc > 2:999352/1‑150 (MQ=255)
aCTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACa > 8:1173779/1‑150 (MQ=255)
cTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAAt > 5:383175/1‑151 (MQ=255)
cTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAAt > 1:985842/1‑151 (MQ=255)
tCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAAt < 4:159176/149‑1 (MQ=255)
tCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAAt < 5:1270803/149‑1 (MQ=255)
tCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAAt < 3:595846/149‑1 (MQ=255)
cgcAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTc > 8:39433/1‑151 (MQ=255)
gcAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCg > 1:344896/1‑151 (MQ=255)
cAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGt > 3:353874/1‑151 (MQ=255)
agagAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGtt > 7:710975/1‑151 (MQ=255)
aaaTCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATaa < 6:1429474/151‑1 (MQ=255)
aTCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAAt < 1:10058/151‑1 (MQ=255)
tCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAAt > 6:501710/1‑150 (MQ=255)
cGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGt < 1:1025642/151‑1 (MQ=255)
gTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGtt < 1:1346783/151‑1 (MQ=255)
gTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGtt < 1:275961/151‑1 (MQ=255)
aGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTg < 2:753222/151‑1 (MQ=255)
aGGGATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTg < 5:237020/151‑1 (MQ=255)
gggATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGt < 4:1052403/151‑1 (MQ=255)
gATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTc > 4:393162/1‑150 (MQ=255)
gATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTc > 7:1319477/1‑150 (MQ=255)
gATAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCa < 3:1542607/151‑1 (MQ=255)
aTAAGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAg < 3:16387/151‑1 (MQ=255)
aaGGTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAGa < 8:1652341/150‑1 (MQ=255)
gTCTGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAGACTTg > 3:1306757/1‑151 (MQ=255)
tGGCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGAGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGACGTTTCATAAATAGTTGCCCTGTCAGACTTgc > 6:620969/1‑149 (MQ=255)
ggCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAGACTTgcagg < 2:619559/151‑1 (MQ=255)
ggCGCGCTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTACCCTGTCAGACTTgcagg < 1:737045/151‑1 (MQ=255)
gcgcTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAGACTTgcaggcag < 6:122766/151‑1 (MQ=255)
gcgcTGCCTGGCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAGACTTgcaggcag < 5:72450/151‑1 (MQ=255)
ggCTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAGACTTGCAGGCAGACTTTGc > 8:1599003/1‑149 (MQ=255)
cTCGTCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAGACTTGCAGGCAGCCTTTGCAgg > 1:55478/1‑150 (MQ=255)
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TAAAATCACCATCCCCAGCGTCTGGAAAGAACCGGAAGAGATGCTGGCGGCAATATCGCGCGCATCGTGCGTGACATCGGCTAATGCCTGCACTTCGCGCAGAGAAAAATCCGTTTCGAGGGATAAGGTCTGGCGCGCTGCCTGGCTCATCACCAGATGCGTTTCGATATCTGTGACATCGCGCAGAACCTGTAATAAGCGCACGCCATAAATCGCGCCGCTGGCACCGCTGATGCCTACAATGAGTCGTTTCATAAATAGTTGCCCTGTCAGACTTGCAGGCAGACTTTGCAGG > NC_000913/2428372‑2428666
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
