Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,085,319 |
G→A |
A69A (GCC→GCT) |
yeeE ← |
UPF0394 family inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,085,319 | 0 | G | A | 96.1%
| 1187.3
/ 21.4
| 363 | A69A (GCC→GCT) | yeeE | UPF0394 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (9/5); new base A (162/184); total (172/191) |
| Fisher's exact test for biased strand distribution p-value = 2.76e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 364 total aligned reads displayed.
ATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAGGCAAAAACGCCCACGC > NC_000913/2085170‑2085466
|
tcaCCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGc > 2:1213347/1‑151 (MQ=255)
ccATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTc < 1:293494/151‑1 (MQ=255)
atatAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGt > 7:1034922/1‑151 (MQ=255)
tataAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGt > 1:498399/1‑150 (MQ=255)
ataAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTa > 3:1332583/1‑150 (MQ=255)
taAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCAACGGGAACGCCCCAGCTTCGTa > 4:479764/1‑149 (MQ=255)
aGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTc < 8:758294/151‑1 (MQ=255)
gTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTc > 4:214590/1‑150 (MQ=255)
gTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCa < 7:148656/151‑1 (MQ=255)
gAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAg < 3:1082263/150‑1 (MQ=255)
aaaGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAg < 7:942787/151‑1 (MQ=255)
aaaGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAg < 2:510112/151‑1 (MQ=255)
aaGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAgg < 8:173444/151‑1 (MQ=255)
aaGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAgg > 8:408520/1‑151 (MQ=255)
aaGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAgg < 2:1075252/151‑1 (MQ=255)
cgcgATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGccc < 1:537004/151‑1 (MQ=255)
cgcgATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGccc > 8:1309712/1‑151 (MQ=255)
aTCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCt > 5:811283/1‑151 (MQ=255)
aTCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCt < 5:286275/151‑1 (MQ=255)
aTCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCt < 4:313713/151‑1 (MQ=255)
tCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTg > 6:1216100/1‑151 (MQ=255)
aaCTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAAt > 3:848199/1‑151 (MQ=255)
aCTGCTGATCAATCGCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAAtt < 2:687231/151‑1 (MQ=255)
aCTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAAtt > 6:542569/1‑151 (MQ=255)
aCTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAAtt > 8:1646260/1‑151 (MQ=255)
gCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCGCCTGAATTaa < 8:1207965/150‑1 (MQ=255)
ccGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAAcc > 5:1021652/1‑150 (MQ=255)
gATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGc > 7:640039/1‑150 (MQ=255)
gATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGc > 6:1006049/1‑150 (MQ=255)
aTCACTCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCaa < 6:146381/151‑1 (MQ=255)
cAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCaaaa < 1:1109599/151‑1 (MQ=255)
aaTCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCaaaaa < 5:1511915/151‑1 (MQ=255)
aaTCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCaaaa > 8:776322/1‑150 (MQ=255)
ccTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCGACCTATAACAGAACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAAcccc > 1:825276/1‑151 (MQ=255)
ccTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAAcccc > 2:1648041/1‑151 (MQ=255)
tCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAAcccccc > 5:1263371/1‑150 (MQ=255)
cACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCa < 6:30861/150‑1 (MQ=255)
cACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCAc < 4:979582/151‑1 (MQ=255)
cACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCAc < 3:346254/151‑1 (MQ=255)
aCCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCCCCTATAACAGTACCACGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACg > 8:1067681/1‑151 (MQ=255)
cccGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGc < 5:711768/151‑1 (MQ=255)
gcgcgATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCttt < 8:1486142/151‑1 (MQ=255)
cgATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCGGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTACCGCAAAACCCCCCCCGCTTTGt > 3:1669123/1‑150 (MQ=255)
aCCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCg > 7:451604/1‑150 (MQ=255)
ccAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGa > 4:1002939/1‑150 (MQ=255)
cAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGaaa < 4:1437638/151‑1 (MQ=255)
cAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGaa > 3:1524074/1‑150 (MQ=255)
gTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTg < 1:1319067/151‑1 (MQ=255)
gTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTg < 4:566846/151‑1 (MQ=255)
cccGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGc < 5:1597115/150‑1 (MQ=255)
ccGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTTACGCAAAAACCCCCACGCTTTGTACCGAAATTGCa > 4:611037/1‑150 (MQ=255)
ccGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCa > 1:1225679/1‑150 (MQ=255)
gTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCa < 3:1004764/151‑1 (MQ=255)
gggCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAg < 5:1138759/150‑1 (MQ=255)
gCACATCCACCCGCGAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCa < 3:1471666/151‑1 (MQ=255)
gCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGc > 1:599847/1‑150 (MQ=255)
gCACATCCAACCGCCAGAACAATTCCCAGCCCGAAGATATACCGACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCGCCACGCTTTGTACCGAAATTGCAATCAGCa < 4:42005/151‑1 (MQ=255)
caTCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAgg > 4:798494/1‑151 (MQ=255)
aTCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGc < 4:1198744/151‑1 (MQ=255)
tCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCg > 6:602279/1‑151 (MQ=255)
cGCCAGACCAATTCCCAGCCCGCAGATATACCCACCTATAACAGTACCACGCCACCGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAAc < 4:1325686/151‑1 (MQ=255)
aGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGc < 8:853661/151‑1 (MQ=255)
aGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGc < 4:1575585/151‑1 (MQ=255)
gAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCg < 8:266586/151‑1 (MQ=255)
cAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGatt > 6:842390/1‑151 (MQ=255)
aaTTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGatta < 2:1515952/151‑1 (MQ=255)
aaTTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGCGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGatta < 2:279957/151‑1 (MQ=255)
cccAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTAtttt > 1:671971/1‑151 (MQ=255)
cgaNCCCGAAGTNNNTCCCACNTNTTACAGNANCAATCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGGCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGTAATTGCAATCATCAAGGCGTAAAACATGGGATTAttttt < 1:1007713/149‑1 (MQ=255)
cAGCCCGAAGATATACCCACCTATAACAGTACCAACGCACGGGAACGCCCCAGCTTCGTAAGTCACTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTc < 7:1637502/151‑1 (MQ=255)
cGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGat > 8:1116741/1‑151 (MQ=255)
cGAAGATATACCCACCTATAACAGTACCAACCCACGGGAACGCCCCAGCTTCGTAACTCAGTAGGCCCGACAGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAATACATGCGATTATTTTTCACGat > 8:1662227/1‑151 (MQ=255)
gAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGat > 7:394631/1‑150 (MQ=255)
aaGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGatat > 8:1538766/1‑151 (MQ=255)
aaGATATAACCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGatat < 2:876007/151‑1 (MQ=255)
aGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGAtata < 2:1167797/151‑1 (MQ=255)
aGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGAtata < 7:713392/151‑1 (MQ=255)
gATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATAc > 6:1603242/1‑151 (MQ=255)
atatACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATAc > 5:145450/1‑150 (MQ=255)
aataCCCACCTATAACAGTACCAAGCCCCGGGAACGCCCCAGCTTCGTAACTCACTAGGCCCGCCCGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACat < 7:1571269/150‑1 (MQ=255)
ataCGCTCCTATAACAGTACCAAGCCACGGGAACGCGGCAGCTTCGTTAGTCAGTAGGCCCGCCTGAATTATCGCAAAAACCCCGACGCTTTGTAGCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACat < 1:648631/150‑1 (MQ=255)
ataCCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACat > 1:436976/1‑150 (MQ=255)
taCCCACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACatat > 3:1245139/1‑151 (MQ=255)
cccACCTATAACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATcg < 3:232224/151‑1 (MQ=255)
taACAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATCCGATTATTTTTCACGATATACATATCGCGAAAacc > 8:339888/1‑151 (MQ=255)
aCAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAaccac < 7:207910/151‑1 (MQ=255)
cAGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAaccacc < 6:1311689/151‑1 (MQ=255)
aGTACCAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCt > 2:415139/1‑151 (MQ=255)
cAAGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAg < 5:180411/151‑1 (MQ=255)
aaGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAgg > 3:726411/1‑151 (MQ=255)
aaGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAgg > 5:55588/1‑151 (MQ=255)
aaGCCACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTAATTTTCACGATATACATATCGCGAAAACCACCTGTCAgg > 7:1264935/1‑151 (MQ=255)
ccACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAGGCaa < 3:1392104/151‑1 (MQ=255)
cACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAGGCaa > 1:870980/1‑150 (MQ=255)
cACGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAAACACCTGTCAGGCaa > 2:212707/1‑150 (MQ=255)
cGGGAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAGGCaaaa > 2:1019162/1‑150 (MQ=255)
ggAACGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAGGCAAAAACg > 7:537029/1‑151 (MQ=255)
cGCCCCAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAGGCAAAAACGccc > 5:1162195/1‑150 (MQ=255)
gCCCCGGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAGGCAAAAACGCCCAc > 6:391017/1‑151 (MQ=255)
cccAGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAGGCAAAAACGCCCACGc < 2:1366545/151‑1 (MQ=255)
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ATCACCATATAAGTGAAAAGCGCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAGATATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCGCCTGAATTAACGCAAAAACCCCCACGCTTTGTACCGAAATTGCAATCAGCAAGGCGTAAAACATGCGATTATTTTTCACGATATACATATCGCGAAAACCACCTGTCAGGCAAAAACGCCCACGC > NC_000913/2085170‑2085466
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
