Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,065,449 |
G→A |
L216L (TTG→TTA) |
scpC → |
propionyl‑CoA:succinate CoA transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,065,449 | 0 | G | A | 97.0%
| 1365.5
/ 18.7
| 407 | L216L (TTG→TTA) | scpC | propionyl‑CoA:succinate CoA transferase |
| Reads supporting (aligned to +/- strand): ref base G (5/7); new base A (213/181); total (218/189) |
| Fisher's exact test for biased strand distribution p-value = 5.59e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.67e-01 |
Only 100 of 407 total aligned reads displayed.
CGCGCGTTGCAGAACTGGCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTGCCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCAATATCAA > NC_000913/3065301‑3065595
|
gcgcgTTGCAGAACTGGCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTAccc > 4:889501/1‑151 (MQ=255)
cgcgTTGCAGAACTGGCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTAcccc > 2:809754/1‑150 (MQ=255)
cgTTGCAGAACTGGCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCCAc > 4:1201920/1‑151 (MQ=255)
ttGCAGAACTGGCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCcgccgc > 2:1668986/1‑151 (MQ=255)
ggCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAata < 3:1513084/149‑1 (MQ=255)
ggCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGAGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATg < 1:400959/151‑1 (MQ=255)
gCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGc < 2:757153/151‑1 (MQ=255)
cGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCt > 4:1163240/1‑151 (MQ=255)
cGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCt > 8:821394/1‑151 (MQ=255)
ggATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTg > 3:968620/1‑151 (MQ=255)
gATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTgg < 7:945145/151‑1 (MQ=255)
atatTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGa < 1:1566064/151‑1 (MQ=255)
tatTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGa < 3:1104630/150‑1 (MQ=255)
atTGTGATTGCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATa < 7:111819/151‑1 (MQ=255)
tgtgATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATa > 8:1164901/1‑149 (MQ=255)
gtgATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAg < 3:378882/150‑1 (MQ=255)
tgATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGc > 6:739147/1‑150 (MQ=255)
tgATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGc > 1:1012366/1‑150 (MQ=255)
ccTGGCGCGCCACCGCGGCGCAATAGCCTGTCGATCTTCCAAGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAAt < 6:601100/150‑1 (MQ=255)
tGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATccc > 8:563337/1‑151 (MQ=255)
tGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATccc > 2:921254/1‑151 (MQ=255)
cgcgcCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAACCCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCAtg > 8:1690519/1‑151 (MQ=255)
cgcCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTGCCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCAtgtg < 1:834798/151‑1 (MQ=255)
cACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGcc > 2:270191/1‑150 (MQ=255)
aCCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGcc > 1:1446816/1‑149 (MQ=255)
cggcgCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCcagc > 2:1138287/1‑148 (MQ=255)
ggcgCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCcagc > 1:1322905/1‑147 (MQ=255)
cgcAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTg < 7:435405/151‑1 (MQ=255)
aaTAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCg > 2:1045259/1‑151 (MQ=255)
aTAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCg > 8:72047/1‑150 (MQ=255)
aTAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCg > 5:520208/1‑150 (MQ=255)
aGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATa < 5:934644/151‑1 (MQ=255)
aGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATa < 3:1664573/151‑1 (MQ=255)
gCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATaa < 5:1433945/151‑1 (MQ=255)
gtgtCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACg < 5:39113/151‑1 (MQ=255)
gtgtCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACg > 5:971197/1‑151 (MQ=255)
cGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGt > 7:1036373/1‑151 (MQ=255)
gATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATCTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAACCCACCTTACCCGACGCCGGTAATATGCTCGATAAGCAAAGTCCCATGAGCCAGCAGGTTGCCGATAACGTGGTc > 2:347951/1‑151 (MQ=255)
atcatcCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGAAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTc > 6:141979/1‑150 (MQ=255)
cTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACg > 3:128045/1‑151 (MQ=255)
tCCTTGCATTGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACg < 4:1299970/149‑1 (MQ=255)
tCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTTGCGCCGTCGGGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAACCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTc < 7:261520/146‑1 (MQ=255)
tCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACg < 4:1513208/149‑1 (MQ=255)
tCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGt < 7:597226/150‑1 (MQ=255)
tCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGt < 8:450827/150‑1 (MQ=255)
cATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCt < 4:648769/151‑1 (MQ=255)
cAATGGATCGCGTCGGTACCCGCTATGTGC‑AATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTg > 3:800359/1‑151 (MQ=255)
aaTGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGCCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTg < 5:641938/151‑1 (MQ=255)
ggATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGGTCTTATTGc > 6:1303748/1‑149 (MQ=255)
aTCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGa < 2:1384984/151‑1 (MQ=255)
aTCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGa < 4:344620/151‑1 (MQ=255)
gcgTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAAt > 3:1023674/1‑151 (MQ=255)
gTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGGAGGAAATgg > 6:531600/1‑151 (MQ=255)
cGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGgcg < 6:350931/151‑1 (MQ=255)
cGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGgc < 8:1562117/150‑1 (MQ=255)
cGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGgc < 6:211880/150‑1 (MQ=255)
aCCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCAt < 7:732519/150‑1 (MQ=255)
cGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGc < 4:1623020/151‑1 (MQ=255)
gCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTGCCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCg < 7:1398988/151‑1 (MQ=255)
tATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGGAGGAAATGGCGCATGGGCGt > 1:532812/1‑150 (MQ=255)
tATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATTGGCGt > 4:212967/1‑150 (MQ=255)
tATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGtt > 6:1587690/1‑150 (MQ=255)
aTGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTa < 2:1474768/150‑1 (MQ=255)
aTGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTa < 7:1197580/150‑1 (MQ=255)
gtgCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTc > 5:754756/1‑151 (MQ=255)
gCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTcc < 7:860464/150‑1 (MQ=255)
gCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTcc < 1:729930/150‑1 (MQ=255)
cAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTccgc > 4:94142/1‑151 (MQ=255)
cAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTccgc > 2:723414/1‑151 (MQ=255)
cAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTccgc < 6:982365/151‑1 (MQ=255)
aaaTCTATCCTAAAATTTTTGGCGCCGTGTTTTAAACAAATTTACCGGCCGCGTTTAATATGGTTTATAATAAAATTCCCATGTGCCAGCAGATTGCCGATAAGGTTGTAATGTTTTTTTTGCATGAATTGGCGCTTGGGCTTATTccgcc < 5:1664267/151‑1 (MQ=255)
aaaTCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCGATGTGGCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTccgcc > 1:1391273/1‑151 (MQ=255)
aaaTCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTccgcc > 7:924707/1‑151 (MQ=255)
aaTCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCACATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGTCGCATGGGCGTATTacgccg > 3:593316/1‑151 (MQ=255)
aaTCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAAATTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTccgc > 8:1448257/1‑149 (MQ=255)
cGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCAGGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGa > 3:637154/1‑150 (MQ=255)
cGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGaa < 2:1306007/151‑1 (MQ=255)
cGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCt > 3:1175685/1‑151 (MQ=255)
aaaaaGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGc < 4:1385981/151‑1 (MQ=255)
aaaaaGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGc > 5:1578666/1‑151 (MQ=255)
aGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCt > 6:1134279/1‑151 (MQ=255)
aGATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCt > 5:1083171/1‑151 (MQ=255)
gATTGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTg < 7:1308841/151‑1 (MQ=255)
tGTCGCCGTCGTGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCa > 8:347281/1‑150 (MQ=255)
gTCGCCGTCGTGGAAACCAACTTACCCGAAGCCCGTAATATGCTGGATAACCAAAATACCATGTGCCAGCAGATTGCCGATAACGTGGTCACGATCTTATTGCAGGAAATGCCGCATGGGCGTATACCGCCCGAATTTCTGCCGCTGCaa > 1:948497/1‑150 (MQ=255)
gtcgtGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCg < 4:566032/151‑1 (MQ=255)
gtcgtGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCg > 3:1135238/1‑151 (MQ=255)
gtcgtGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCg > 3:1410851/1‑151 (MQ=255)
cgtGGAAACCAACTTACCCGAGGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTg < 2:480178/151‑1 (MQ=255)
cgtGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTg > 5:291880/1‑151 (MQ=255)
cgtGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTg > 4:455688/1‑151 (MQ=255)
gtGGAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGACGCTGCAAAGTGGCGTgg > 8:610952/1‑151 (MQ=255)
gAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCa < 1:1159551/151‑1 (MQ=255)
gAAACCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCAAGCAGATTGCCGATAACCAGGTCACCTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCGGCCGGAAATTCTGCCGCTGCAAAGTGGctgcggc > 4:846514/1‑144 (MQ=255)
aaaCCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGATTTTCTGCCGCTGCAAAGTGTCGTGGGCa > 6:290650/1‑150 (MQ=255)
aaCCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCAat < 5:1312142/151‑1 (MQ=255)
aCCAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCAat > 3:485880/1‑150 (MQ=255)
ccAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCAatat > 8:1309640/1‑151 (MQ=255)
ccAACTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCAatat > 3:341953/1‑151 (MQ=255)
aCTTACCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCAATATCa > 7:193833/1‑150 (MQ=255)
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CGCGCGTTGCAGAACTGGCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTGCCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCAATATCAA > NC_000913/3065301‑3065595
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
