Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,207,549 |
Δ1 bp |
coding (179/606 nt) |
ttdB → |
L‑tartrate dehydratase, beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,207,548 | 0 | G | . | 94.0%
| 1550.8
/ 98.5
| 370 | coding (178/606 nt) | ttdB | L‑tartrate dehydratase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base G (13/9); new base . (165/182); total (178/192) |
| Fisher's exact test for biased strand distribution p-value = 3.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 377 total aligned reads displayed.
AAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTG > NC_000913/3207398‑3207694
|
aaaGCTGAAGATCTGCATGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTAGGCTGGTGACCTGCCGCGACGTTTGGCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCTg < 6:373550/151‑1 (MQ=255)
aaGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCTgc < 4:804210/151‑2 (MQ=255)
gCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCTGccc > 5:1200608/1‑151 (MQ=255)
cTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGCTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACCTCCGATACCTTACGATCTCAACGGCAAAGCGATTTTCCACGCTGcccc > 8:1277517/1‑151 (MQ=255)
aaGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATc > 1:1599908/1‑151 (MQ=255)
aTCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTg > 3:183222/1‑151 (MQ=255)
tCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTgc > 8:1460289/1‑151 (MQ=255)
cAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACAGAAACGTCCGATCCCTTACGATCTCAACCGCAAAGCGAATTTCCACGCT‑GCCCCATCGTGCCCa > 5:139701/1‑150 (MQ=255)
aGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCaaa > 3:393373/1‑150 (MQ=255)
gATATTCGCGTCGGCGATGTGATCTACGTGACCGGTACGCTGGTGACCTGCAGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCaaaaa < 1:1355282/151‑1 (MQ=255)
gATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCaaaa > 5:211101/1‑150 (MQ=255)
gcgTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGAc > 8:1685989/1‑151 (MQ=255)
cgTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACa < 3:1390116/151‑1 (MQ=255)
cgTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCCAc > 4:239027/1‑150 (MQ=255)
cGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAAt > 8:1601758/1‑151 (MQ=255)
ggCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATg < 3:614107/151‑1 (MQ=255)
gCGATGTGATCTACCTGACGGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATgg > 7:604056/1‑151 (MQ=255)
cGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATggg < 2:1369882/151‑1 (MQ=255)
cGATGTGATCTACATGAAATGTACGCTGTTGACCTGACGCGACGTTTGTCACCTCCGTTTGATCGCACAGAAACTTACGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCAATCGTGCTCAAAAACTGAGACAAATgt > 6:845284/1‑149 (MQ=255)
gATGTGATCTACCTGACCGGTTCGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGga < 6:96561/151‑1 (MQ=255)
aTGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGATCTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATggg > 6:1653715/1‑149 (MQ=255)
aTGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGCCAAATggg > 3:509333/1‑149 (MQ=255)
gATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATgg > 4:714461/1‑151 (MQ=255)
cTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGtct > 6:199317/1‑151 (MQ=255)
cTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGtct > 1:1206996/1‑151 (MQ=255)
aCCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGC‑CGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGtctc < 1:1059325/150‑1 (MQ=255)
ccTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGGCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCg < 2:1451738/151‑1 (MQ=255)
gACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTc < 6:568759/150‑1 (MQ=255)
agcGGTACGCTGGTGACCTGCCGCGAGGTTTGTCACGGCCGTTTGATCGAACTGAAACGTCCGATCCGTTACGATCTCAACGGCAAAGCGATTTTCGACGCT‑GCCCCATGGTGCGCAAAAACGGCGTCAAATGGGAGATGGTCTCCGTCgg < 3:1267952/149‑1 (MQ=255)
gTACGCTGGGGCCCCGCCGCCCCGTTTGGCCCCCCCGTTTTCTGGAACTTAAACGTCCGCACCCTTTACCTCCCCACCGCAAACCGAATTTCCCCGCT‑GCCCCATCCTGCGCAAAAACGGCCACAAATGGGAGATGGTCTCCGTCGGCCCg < 4:423487/151‑1 (MQ=255)
cGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGAc > 3:921569/1‑150 (MQ=255)
cGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACa < 2:745304/151‑1 (MQ=255)
gCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACaa < 1:1691830/151‑1 (MQ=255)
ggTGACCTGCCGCGACGTTTGGCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAAcc < 7:1047107/150‑1 (MQ=255)
gTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGA‑TTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGt < 8:37193/151‑1 (MQ=255)
ccTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATg < 1:981682/151‑1 (MQ=255)
ccGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTa < 8:4608/151‑1 (MQ=255)
gcgACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATg < 5:1025822/151‑1 (MQ=255)
gACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATgg > 1:255004/1‑150 (MQ=255)
aCGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGaa < 1:908816/151‑1 (MQ=255)
cGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGCCAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGaa > 1:780478/1‑150 (MQ=255)
gTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGaa > 6:1392863/1‑150 (MQ=255)
gTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGaa > 6:6316/1‑149 (MQ=255)
ttGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGt < 5:715927/150‑1 (MQ=255)
gTCACCGCCGTTTGATCGAACTGAAACCTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGttt < 8:1032946/150‑1 (MQ=255)
aCCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGa > 1:1412062/1‑150 (MQ=255)
aCCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGa > 8:545628/1‑150 (MQ=255)
ccgccgTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAAc < 5:533466/151‑1 (MQ=255)
cgccgTTTGATCGAACCGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACg > 3:1661641/1‑151 (MQ=255)
ccgTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTg < 7:1656281/151‑1 (MQ=255)
cgTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGa < 7:735824/151‑1 (MQ=255)
cgTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGa < 5:850376/151‑1 (MQ=255)
gTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGaa < 8:1167472/151‑1 (MQ=255)
tttGATCGAACTGAAACGTCCGATCCCTTACCATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGACTCCGTCGGCCCGACAACCAGTATGCGTATCGAAACTTTTGACCGAGAAt > 4:1538456/1‑151 (MQ=255)
ttGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAAtt > 3:571852/1‑151 (MQ=255)
gAAGTGAAACGTCCGATCCCTTACGATCTCAACGCCAAAGCGATTTTGCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGa < 3:1509511/151‑1 (MQ=255)
gAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGa < 3:821534/151‑1 (MQ=255)
tGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCTGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGc > 7:415641/1‑149 (MQ=255)
taaaCGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGc > 5:249807/2‑148 (MQ=255)
gAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGGGACAAATTGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAg < 4:1020702/150‑1 (MQ=255)
gAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGc > 6:119335/1‑148 (MQ=255)
gAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAg < 2:519274/150‑1 (MQ=255)
gAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAg < 2:1505659/150‑1 (MQ=255)
aaaCGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGAc < 1:56675/151‑1 (MQ=255)
aaaCGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGAc > 5:971704/1‑151 (MQ=255)
aCGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCg > 8:226816/1‑151 (MQ=255)
gTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGAGCGGc > 2:922791/1‑151 (MQ=255)
ccGATCCCTTACGATCTCACCGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGt < 2:82842/151‑1 (MQ=255)
ccGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGt > 2:262047/1‑151 (MQ=255)
cGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTg > 2:990186/1‑151 (MQ=255)
gATCGCTTAGGATCTCAATGTGAAAGCTATTTTCCACGCT‑GCCCCATCGTGCGCAAATACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGa < 4:1457914/151‑1 (MQ=255)
gATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGa < 5:163712/151‑1 (MQ=255)
aTCCCTTACGATCTCTACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGaa < 2:561643/151‑1 (MQ=255)
aTCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGC‑AAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGaa > 4:502206/1‑150 (MQ=255)
tCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGaa > 6:356564/1‑150 (MQ=255)
ccTTACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACt < 4:1531628/151‑1 (MQ=255)
ttACGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACtgg > 7:1393977/1‑151 (MQ=255)
aCGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACtggtg < 7:1616823/151‑1 (MQ=255)
aCGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACtggtg < 3:282723/151‑1 (MQ=255)
aCGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACtggtg < 2:8701/151‑1 (MQ=255)
cGATCTCAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACtggtgg > 7:1274763/1‑151 (MQ=255)
tcAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGc > 7:900196/1‑151 (MQ=255)
cAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACtggtgg < 4:1141850/145‑1 (MQ=255)
cAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTg < 2:395033/148‑1 (MQ=255)
cAACGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCa < 2:184790/151‑1 (MQ=255)
aaCGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCaa < 5:340669/151‑1 (MQ=255)
aaCGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCa > 1:459891/1‑150 (MQ=255)
cGGCAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCaa > 2:1678088/1‑149 (MQ=255)
cAAAGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGCCCACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCCGCGTGACCCTGGGGGTTCGCAACggtg > 3:1178707/1‑151 (MQ=255)
aaGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAggtggt > 2:1250594/1‑151 (MQ=255)
aaGCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAggtggt > 8:474767/1‑151 (MQ=255)
aGCGATTTTCCACGC‑GGCCGCCTGGGGCGCAAAAACGGGGTCAAATGGGAGTTGGTCGCCGGCGGCCCGACATCGAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTa < 6:1076036/151‑1 (MQ=255)
gCGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTAt > 8:731737/1‑151 (MQ=255)
gCGATTTTCCACGCT‑GCACCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTAt < 7:1187654/151‑1 (MQ=255)
cGATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATg > 4:1375696/1‑151 (MQ=255)
gATTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATgg < 3:1417591/151‑1 (MQ=255)
aTTTTCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATggg < 5:1556331/151‑1 (MQ=255)
ttCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGcc > 2:1192369/1‑151 (MQ=255)
ttCCACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGc < 8:914771/150‑1 (MQ=255)
cACGCT‑GCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCt < 3:1599071/151‑1 (MQ=255)
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AAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTG > NC_000913/3207398‑3207694
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
