Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,256,157 |
C→T |
Q165Q (CAG→CAA) |
yhaM ← |
putative L‑serine dehydratase alpha chain |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,256,157 | 0 | C | T | 97.0%
| 1120.9
/ 14.9
| 337 | Q165Q (CAG→CAA) | yhaM | putative L‑serine dehydratase alpha chain |
| Reads supporting (aligned to +/- strand): ref base C (4/6); new base T (168/158); total (173/164) |
| Fisher's exact test for biased strand distribution p-value = 5.34e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.07e-01 |
Only 100 of 342 total aligned reads displayed.
ATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGA > NC_000913/3256009‑3256303
|
tAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTgg > 6:248581/1‑151 (MQ=255)
aaCGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTggg > 4:1519503/1‑151 (MQ=255)
acaATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAac < 3:273254/151‑1 (MQ=255)
aaTTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCCCACACGCCTGTTGGGTAAacac > 3:1632222/1‑151 (MQ=255)
ttAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAacaccac > 5:824375/1‑151 (MQ=255)
ttAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAacaccac > 6:264210/1‑151 (MQ=255)
tAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAacaccac < 1:343545/150‑1 (MQ=255)
tCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAAcaccacacca < 7:645951/149‑1 (MQ=255)
cgcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATc < 7:1572839/150‑1 (MQ=255)
cgcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCg < 7:778897/151‑1 (MQ=255)
cgcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCg < 2:112427/151‑1 (MQ=255)
cgcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATc < 7:1477669/150‑1 (MQ=255)
gcgGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGt > 7:1285955/1‑151 (MQ=255)
gAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCg < 1:2878/151‑1 (MQ=255)
gAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATCGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCg < 3:1463696/151‑1 (MQ=255)
aTCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGtc > 6:91458/1‑151 (MQ=255)
aTCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGtc < 5:1346457/151‑1 (MQ=255)
cGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGtct < 1:533454/150‑1 (MQ=255)
gagaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCg > 7:267165/1‑151 (MQ=255)
agaATAAAGCGGATCGCCGCAAACGGGACGTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCg > 8:772183/1‑150 (MQ=255)
gaATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGat < 3:433933/151‑1 (MQ=255)
aaTAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGat > 4:1584065/1‑150 (MQ=255)
aTAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCCGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGATGGGTAAACACCACACCATCCTGCGTCTCGatat > 4:545240/1‑151 (MQ=255)
tAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGtctc > 6:65457/1‑145 (MQ=255)
tAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGtctc < 8:65562/145‑1 (MQ=255)
aaaGCGGATCGCCGCATACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGc < 2:596824/151‑1 (MQ=255)
acgCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCGAGCGTCGTTCTGGAAAGCACCGGCAGGGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGca < 1:1158158/149‑1 (MQ=255)
ggATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCATCTGCCACACACGCCTGTTGCTTAAACACCACACCATCGTGCGTCTCGATATGCACAAt > 1:1020891/1‑151 (MQ=255)
gATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATg < 2:1078561/151‑1 (MQ=255)
aTCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGt > 7:995543/1‑151 (MQ=255)
aTCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGt < 8:1280509/151‑1 (MQ=255)
cgccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTg < 8:821719/151‑1 (MQ=255)
cgccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTg < 4:1058309/151‑1 (MQ=255)
cgccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCGCGATATGCACAATGTTg > 4:407736/1‑151 (MQ=255)
gccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTgg < 4:847289/151‑1 (MQ=255)
gcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTAt < 8:1508368/151‑1 (MQ=255)
gcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCATGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAAAACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTAt > 3:1674638/1‑151 (MQ=255)
cAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATg < 1:1256326/151‑1 (MQ=255)
aCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACAATCGTGCGTCTCGATATGCACAATGTTGGTATGccc > 8:1623347/1‑151 (MQ=255)
cGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccg > 3:639869/1‑151 (MQ=255)
cGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccg > 3:969180/1‑151 (MQ=255)
ggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccgcc < 5:279070/151‑1 (MQ=255)
ggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccgcc < 8:558897/151‑1 (MQ=255)
gACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccgccg > 3:125287/1‑151 (MQ=255)
gACTTCATTGACGAACTTCAGGACCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccgccg < 6:526467/151‑1 (MQ=255)
aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcga < 3:525944/151‑1 (MQ=255)
tCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgacg < 4:1655761/150‑1 (MQ=255)
tCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgac < 5:51014/149‑1 (MQ=255)
tCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgac < 1:1667312/149‑1 (MQ=255)
tCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCCGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgac < 1:1499877/149‑1 (MQ=255)
cATTGACGAACTTCAGGATCTCAGCGAGCGTCGTTGTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGAt < 8:480255/151‑1 (MQ=255)
cATTGACGAACTTCAGGATCTCAGCCAGCCTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGCTAAACACCACACCATCGTGCGTCTCGATAAGAACAATGTTGGTATCCCCGCcgacg > 6:1560784/1‑149 (MQ=255)
aTTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATg < 5:776688/151‑1 (MQ=255)
ttGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATgg > 7:34460/1‑151 (MQ=255)
gACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTg > 7:393485/1‑151 (MQ=255)
gACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTg < 7:490685/151‑1 (MQ=255)
gAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGaca < 3:1025672/151‑1 (MQ=255)
aaCTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGacac < 2:256588/151‑1 (MQ=255)
aCTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGacaca < 5:1083304/151‑1 (MQ=255)
ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGccc > 3:1106330/1‑150 (MQ=255)
cgtTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAg < 2:1378837/151‑1 (MQ=255)
tGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACttt > 8:526941/1‑151 (MQ=255)
ggAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACttt < 5:606541/150‑1 (MQ=255)
ggAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTg > 8:250363/1‑151 (MQ=255)
gCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGcgcg > 1:740179/1‑151 (MQ=255)
aCCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTg > 3:790156/1‑151 (MQ=255)
aCCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACAGTTCCAGACTTTGGCGCGTg > 1:133612/1‑151 (MQ=255)
cGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCAAACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTg > 3:57394/1‑149 (MQ=255)
aaaGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTgaga > 4:138482/3‑150 (MQ=255)
cAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGagaag < 3:1333614/151‑1 (MQ=255)
gagaCTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCTCAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGAt < 2:1519542/151‑1 (MQ=255)
agaCTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGAtt < 5:307524/151‑1 (MQ=255)
agaCTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGAtt < 5:1246001/151‑1 (MQ=255)
agaCTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGAtt < 1:70867/151‑1 (MQ=255)
aCTCTTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTc < 2:83771/151‑1 (MQ=255)
tctTGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCAt > 3:374948/1‑151 (MQ=255)
tGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCAt < 1:658596/148‑1 (MQ=255)
tGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCAt < 3:1190666/148‑1 (MQ=255)
tGCTCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCg < 2:1308661/150‑1 (MQ=255)
tCGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCa > 6:471040/1‑149 (MQ=255)
gcGCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAg < 2:624310/150‑1 (MQ=255)
gCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGt < 8:284306/151‑1 (MQ=255)
gCCCTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGt < 8:1071138/151‑1 (MQ=255)
cccTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGtt < 8:91626/151‑1 (MQ=255)
cccTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGtt < 4:986754/151‑1 (MQ=255)
ccTCTGCCACACCCGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTc < 5:1304298/151‑1 (MQ=255)
ccTCTGCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGAAACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTc > 2:953227/1‑151 (MQ=255)
tGCCACACACGCCTGTTGGGTAAACCCCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTgg > 7:897730/1‑151 (MQ=255)
gCCACACACGCCTGTTGTGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTg < 2:1269724/149‑1 (MQ=255)
gCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTg < 2:785600/149‑1 (MQ=255)
gCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTg < 2:196945/149‑1 (MQ=255)
gCCACACACGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGa < 3:866422/151‑1 (MQ=255)
gCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTgg > 5:1548937/1‑150 (MQ=255)
cagatacGCCTGTTGTGTTAACAGCACACCATCGTGCGTCTCGATATGAAGAATGTTGGTATGCCCGGGGATGATGGTGACAGACGGCCAGTTCTCACCGTTGCAGACTTTGGCGCGTGAGAAGAGGATTTCATGGCAAGGTTCGTGGATc < 6:1081606/146‑1 (MQ=255)
acacacGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTAGATCt < 3:1585757/151‑1 (MQ=255)
cacGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCACACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTACTGGATCTTa > 7:10966/1‑150 (MQ=255)
acGCCTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAAc < 6:751198/151‑1 (MQ=255)
gCCTGTTGGGGAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACgg < 4:221409/151‑1 (MQ=255)
ccTGTTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAACGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACgg > 6:1157394/1‑150 (MQ=255)
ctgttgGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACgg > 5:937784/1‑149 (MQ=255)
|
ATAACGCACAATTTAGCTTCGCGGAATCGAGAATAAAGCGGATCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACACGCCCACTTCTCACCGTTCCAGACTTTGGCGCGTGAGAAGAGGATTTCATCGCAAGGTTCCTGGATCTTAACGGA > NC_000913/3256009‑3256303
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
