Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F84 I10 R1
|
267 |
426.1 |
13521957 |
97.0% |
13116298 |
150.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,579,050 |
G→A |
A199V (GCC→GTC) |
yhhW ← |
quercetinase activity in vitro |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,579,050 | 0 | G | A | 95.6%
| 1446.6
/ 37.4
| 452 | A199V (GCC→GTC) | yhhW | quercetinase activity in vitro |
| Reads supporting (aligned to +/- strand): ref base G (12/8); new base A (202/229); total (215/237) |
| Fisher's exact test for biased strand distribution p-value = 2.63e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.78e-01 |
Only 100 of 457 total aligned reads displayed.
GAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAACCATCTC > NC_000913/3578902‑3579197
|
gagcgagGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGCCGAGACt < 3:750121/151‑1 (MQ=255)
cgagGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTc < 6:945214/151‑1 (MQ=255)
gagGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGTGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCa < 2:653136/151‑1 (MQ=255)
agGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGCGACTTTCAc > 7:952249/1‑151 (MQ=255)
agGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCAc > 1:412707/1‑151 (MQ=255)
ggAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACg < 5:825101/151‑1 (MQ=255)
aGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCg < 2:440577/151‑1 (MQ=255)
ccTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGtt < 3:719014/151‑1 (MQ=255)
aaaaGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGt > 6:1373882/1‑151 (MQ=255)
aaaGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTg > 8:37173/1‑151 (MQ=255)
aaaGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTg < 5:1060247/151‑1 (MQ=255)
tgcaggcTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGt > 2:1667931/2‑147 (MQ=255)
gaggcTTAAAATATGCGGTTGAG‑‑TTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGc < 2:1229683/150‑1 (MQ=255)
cTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCt > 3:267051/1‑151 (MQ=255)
cAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGTCCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCttt < 4:698403/150‑1 (MQ=255)
cAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTc < 5:1500732/151‑1 (MQ=255)
aaaGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTc > 8:1304940/1‑150 (MQ=255)
aaGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACATTAACACTTCGCTGTCGATATACGGATGGATGCAGATAGCCTGCTCATCCCAGATTGCCAGACCATCGCTCGTCGAGACTTTCACGCCGTTAAAGCTCAAATAGACTTTca > 5:456895/1‑150 (MQ=255)
gATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTcacca < 8:197337/151‑1 (MQ=255)
gATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTcacc > 7:867680/1‑150 (MQ=255)
gCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCt > 1:1299907/1‑151 (MQ=255)
ccGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTg > 7:438175/1‑151 (MQ=255)
cGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTgg > 6:443897/1‑151 (MQ=255)
cGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTgg < 2:228809/151‑1 (MQ=255)
tGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGAt < 7:526849/150‑1 (MQ=255)
tGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGAt < 1:1035202/150‑1 (MQ=255)
gAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATcc < 6:488198/151‑1 (MQ=255)
gTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATcc > 1:315338/1‑149 (MQ=255)
ttAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGAc < 3:517897/150‑1 (MQ=255)
tAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGAcg < 8:1170573/150‑1 (MQ=255)
tAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGAcg < 5:773863/150‑1 (MQ=255)
aaaCCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGAcgcg < 1:1470206/151‑1 (MQ=255)
aaCCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACgcgg > 5:1664603/1‑151 (MQ=255)
aCCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACgcggc < 6:288003/151‑1 (MQ=255)
aCCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACgcggc > 2:46983/1‑151 (MQ=255)
ggcggcAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGtt > 6:1519366/1‑151 (MQ=255)
gcggcAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTc < 5:1197144/151‑1 (MQ=255)
gcggcAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATAGCCAGACCATAGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTc > 1:1364316/1‑151 (MQ=255)
cggcAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCa < 8:1358272/151‑1 (MQ=255)
gcAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGc < 7:1260433/151‑1 (MQ=255)
cAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCg < 2:1526517/151‑1 (MQ=255)
aGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCgg < 2:752834/151‑1 (MQ=255)
aTCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGTTTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCa < 5:521490/151‑1 (MQ=255)
aTCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCTCCACCTGGATCCAGACGCGGCGTTCAGCGGcc > 6:1018974/1‑150 (MQ=255)
aTCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCa < 3:409077/151‑1 (MQ=255)
gAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATc > 4:1515107/1‑151 (MQ=255)
cAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGa < 7:1044642/151‑1 (MQ=255)
aGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGAt > 7:1544811/1‑151 (MQ=255)
gTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATg < 7:81594/151‑1 (MQ=255)
aaCACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGc < 1:726336/150‑1 (MQ=255)
acagTTCGGTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCATATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCAc < 4:1076561/151‑1 (MQ=255)
cacTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTCCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCAcc < 8:1546409/151‑1 (MQ=255)
cTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCg > 2:904072/1‑150 (MQ=255)
tCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACt > 6:1209570/1‑151 (MQ=255)
gCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGc < 2:1311903/151‑1 (MQ=255)
gTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTc < 4:1202273/150‑1 (MQ=255)
tCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCAt > 3:1680348/1‑151 (MQ=255)
tCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCAt > 7:250981/1‑151 (MQ=255)
gCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCt > 1:1595353/1‑151 (MQ=255)
gCTATCCGCATGGATGGAGATGGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCt < 4:878247/151‑1 (MQ=255)
tATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCttt > 8:664708/1‑151 (MQ=255)
aTCCGGATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCTTCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCttt < 7:357216/150‑1 (MQ=255)
aTCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTc > 3:1066356/1‑151 (MQ=255)
ccGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCa < 3:978486/150‑1 (MQ=255)
cGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGc > 1:601283/1‑151 (MQ=255)
cGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGc < 2:1125299/151‑1 (MQ=255)
ggatggaGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACg < 1:658069/150‑1 (MQ=255)
ggaGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAg < 6:616705/151‑1 (MQ=255)
ggaGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAg < 5:632022/151‑1 (MQ=255)
gagaTTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGc < 8:1080945/151‑1 (MQ=255)
aTTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGTTGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGt > 3:138509/1‑151 (MQ=255)
gCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTAc < 2:793750/150‑1 (MQ=255)
gCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACa < 8:552801/151‑1 (MQ=255)
gCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACa < 6:205290/151‑1 (MQ=255)
tGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGtt > 8:875705/1‑151 (MQ=255)
ggCTCATCCCAGATTGCCAGACCATCCCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGCATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGtt < 6:784556/150‑1 (MQ=255)
gCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGtt < 2:583527/150‑1 (MQ=255)
cATCCCAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCat < 4:195442/151‑1 (MQ=255)
ccAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATcc > 4:1342356/1‑151 (MQ=255)
ccAGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATcc > 1:959912/1‑151 (MQ=255)
aGATTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTg > 8:262213/1‑151 (MQ=255)
aTTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGAt < 5:384540/151‑1 (MQ=255)
aTTGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGAt > 7:1323999/1‑151 (MQ=255)
ttGCCAGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATg > 5:706240/1‑151 (MQ=255)
aGACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACtt > 3:1267328/1‑151 (MQ=255)
gACCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACttt > 4:470172/1‑151 (MQ=255)
aCCATCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTc > 5:1378621/1‑151 (MQ=255)
aCCATCGCTGGTCGAGAATTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACCCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTc < 5:978668/151‑1 (MQ=255)
tCGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATg > 1:23665/1‑151 (MQ=255)
cGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCTGAAATCTGATGCACCGACTGCTCATCTTTCATCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGa < 3:1503118/151‑1 (MQ=255)
cGCTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGa < 2:1179715/151‑1 (MQ=255)
cTGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAAc > 4:329723/1‑151 (MQ=255)
tGGTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAAcc > 5:1291699/1‑151 (MQ=255)
ggTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAAc < 7:1170213/149‑1 (MQ=255)
ggTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAACCa < 1:475563/151‑1 (MQ=255)
gTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAACCAt < 3:861488/151‑1 (MQ=255)
gTCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAACCAt < 4:593607/151‑1 (MQ=255)
tCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAACCAtc > 3:560436/1‑151 (MQ=255)
tCGAGACTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAACCAtc > 3:1197142/1‑151 (MQ=255)
gagaCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAACCAtctc < 8:747035/151‑1 (MQ=255)
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GAGCGAGGAAGCCTGCAAAAAGGCAGGCTTCAAAGATGCCGTTGAGTTTTAAACCGGCGGCAGATCGAACAGTAACACTTCGCTGTCGCTATCCGCATGGATGGAGATTGCCTGCTCATCCCAGATTGCCAGACCATCGCTGGTCGAGGCTTTCACGCCGTTAATGGTGACATTGCCTTTCACCACCTGGATCCAGACGCGGCGTTCAGCGGCAATCTGATGCACCGACTGCTCATCTTTCAGCAACGCCCAGCGGTACAGTTCCATATCCTGATGCACTTTCAATGAACCATCTC > NC_000913/3578902‑3579197
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
